RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TMEM218A2RU14 115 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 RAB19A4D1S5 217 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 FAM74A7A6NL05 159 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 HYPMO75409 117 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 IGHV3-30P01768 117 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 IGHV3-33P01772 117 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 IGLC2P0DOY2 106 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 IGHV3-30-3P0DP02 117 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 IGHV3-30-5P0DP03 117 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 GCHFRP30047 84 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 CDC34P49427 236 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-236ENST00000556220 SERF2P84101 59 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 GUK1Q16774 197 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 FAM74A3Q4VXF1 159 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 IBA57Q5T440 356 aaKnown RBP4.43□□□□□ -1.7
ATXN3-236ENST00000556220 SH2D6Q7Z4S9 175 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 Q8N976 141 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 BAALCQ8WXS3 180 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 CTDSP1Q9GZU7 261 aa4.43□□□□□ -1.7
ATXN3-236ENST00000556220 CARHSP1Q9Y2V2 147 aaKnown RBP4.43□□□□□ -1.7
ATXN3-236ENST00000556220 TRAV8-3A0A0A6YYJ7 113 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 PIGBOS1A0A0B4J2F0 54 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 C7orf71A4D174 169 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 UMAD1C9J7I0 102 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 C9JCJ5 164 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 PAGE4O60829 102 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 OR10J4P0C629 311 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 SFTA3P0C7M3 94 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 BCL2P10415 239 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 PPT1P50897 306 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 GNG5P63218 68 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 AKR1C8PQ5T2L2 129 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 S100A7AQ86SG5 101 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 CYB561D1Q8N8Q1 229 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 SCGB1C1Q8TD33 95 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 ZNF479Q96JC4 524 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 LINC00479Q96M42 142 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 SLC50A1Q9BRV3 221 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 TP53TG3Q9ULZ0 132 aa4.42□□□□□ -1.7
ATXN3-236ENST00000556220 KLLNB2CW77 178 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 MPDU1O75352 247 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 RNASE4P34096 147 aaKnown RBP4.41□□□□□ -1.7
ATXN3-236ENST00000556220 AKR1C3P42330 323 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 RAB5CP51148 216 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 UBE2G2P60604 165 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 BTN1A1Q13410 526 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 OR10J3Q5JRS4 329 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 LELP1Q5T871 98 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 DPPA3Q6W0C5 159 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 Q6ZQT7 251 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 MPLKIPQ8TAP9 179 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 RASL10AQ92737 203 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 TVP23CQ96ET8 276 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 GNG13Q9P2W3 67 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 RNF24Q9Y225 148 aa4.41□□□□□ -1.7
ATXN3-236ENST00000556220 LOC100131303A0A0U1RQF7 123 aa4.4□□□□□ -1.71
ATXN3-236ENST00000556220 K7EN84 100 aa4.4□□□□□ -1.71
ATXN3-236ENST00000556220 PFN1P07737 140 aaKnown RBP4.4□□□□□ -1.71
ATXN3-236ENST00000556220 SELENOTP62341 195 aa4.4□□□□□ -1.71
ATXN3-236ENST00000556220 NDUFA5Q16718 116 aa4.4□□□□□ -1.71
ATXN3-236ENST00000556220 LINC00305Q7Z4B0 112 aa4.4□□□□□ -1.71
ATXN3-236ENST00000556220 NHLRC2Q8NBF2 726 aa4.4□□□□□ -1.71
ATXN3-236ENST00000556220 C11orf52Q96A22 123 aa4.4□□□□□ -1.71
ATXN3-236ENST00000556220 FAM19A4Q96LR4 140 aa4.4□□□□□ -1.71
ATXN3-236ENST00000556220 LINC01600Q96MT4 127 aa4.4□□□□□ -1.71
ATXN3-236ENST00000556220 DPH3P1Q9H4G8 78 aa4.4□□□□□ -1.71
ATXN3-236ENST00000556220 IGHV1OR15-1A0A075B7D0 117 aa4.39□□□□□ -1.71
ATXN3-236ENST00000556220 ZNF727A8MUV8 499 aa4.39□□□□□ -1.71
ATXN3-236ENST00000556220 M0R3E3 92 aa4.39□□□□□ -1.71
ATXN3-236ENST00000556220 EIF5AP63241 154 aaKnown RBP4.39□□□□□ -1.71
ATXN3-236ENST00000556220 ERCC8Q13216 396 aa4.39□□□□□ -1.71
ATXN3-236ENST00000556220 C10orf113Q5VZT2 155 aa4.39□□□□□ -1.71
ATXN3-236ENST00000556220 BPIFA4PQ86YQ2 179 aa4.39□□□□□ -1.71
ATXN3-236ENST00000556220 EXOC3-AS1Q8N2X6 119 aa4.39□□□□□ -1.71
ATXN3-236ENST00000556220 ATP6V0E2Q8NHE4 81 aa4.39□□□□□ -1.71
ATXN3-236ENST00000556220 LINC00477Q96M19 166 aa4.39□□□□□ -1.71
ATXN3-236ENST00000556220 ACTR3CQ9C0K3 210 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-236ENST00000556220 TRAV8-1A0A0A6YYK1 113 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 TRAV4A0A0B4J268 109 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 TRAV34A0A0B4J273 112 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 GPX1P07203 203 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 CRISP2P16562 243 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 KHDC3LQ587J8 217 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 UQCC3Q6UW78 93 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 CBLN2Q8IUK8 224 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 OR4C5Q8NGB2 326 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 SGK494Q96LW2 274 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 AGPAT4-IT1Q9H0P7 198 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 PARLQ9H300 379 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 TMEM14CQ9P0S9 112 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 RPH3ALQ9UNE2 315 aa4.38□□□□□ -1.71
ATXN3-236ENST00000556220 TRBV19A0A075B6N1 114 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 C17orf112F2Z3M2 114 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 COX7A2P2O60397 106 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 CXorf1O96002 111 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 GATA1P15976 413 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-236ENST00000556220 CRIP1P50238 77 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 RAB14P61106 215 aa4.37□□□□□ -1.71
ATXN3-236ENST00000556220 RPL23P62829 140 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms