RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 H3BVH4 76 aa12.61□□□□□ -0.39
FOXN3-211ENST00000555855 UPK1BO75841 260 aa12.61□□□□□ -0.39
FOXN3-211ENST00000555855 IFNA7P01567 189 aa12.61□□□□□ -0.39
FOXN3-211ENST00000555855 RPL36AP83881 106 aaKnown RBP12.61□□□□□ -0.39
FOXN3-211ENST00000555855 HSD17B11Q8NBQ5 300 aa12.61□□□□□ -0.39
FOXN3-211ENST00000555855 RPL36ALQ969Q0 106 aaKnown RBP12.61□□□□□ -0.39
FOXN3-211ENST00000555855 MARVELD1Q9BSK0 173 aa12.61□□□□□ -0.39
FOXN3-211ENST00000555855 ACTR3CQ9C0K3 210 aaPredicted RBP12.61□□□□□ -0.39
FOXN3-211ENST00000555855 ARL2-SNX15V9GYD0 113 aa12.61□□□□□ -0.39
FOXN3-211ENST00000555855 CRPP02741 224 aa12.6□□□□□ -0.39
FOXN3-211ENST00000555855 SERF2P84101 59 aa12.6□□□□□ -0.39
FOXN3-211ENST00000555855 PSMG3Q9BT73 122 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-211ENST00000555855 PHLDA3Q9Y5J5 127 aa12.6□□□□□ -0.39
FOXN3-211ENST00000555855 A0A087WWL8 130 aa12.59□□□□□ -0.39
FOXN3-211ENST00000555855 TRBV10-1A0A0K0K1A3 114 aa12.59□□□□□ -0.39
FOXN3-211ENST00000555855 A0A1W2PRE2 83 aa12.59□□□□□ -0.39
FOXN3-211ENST00000555855 DNLZQ5SXM8 178 aa12.59□□□□□ -0.39
FOXN3-211ENST00000555855 SFRP2Q96HF1 295 aa12.59□□□□□ -0.39
FOXN3-211ENST00000555855 TRBV7-3A0A075B6L6 115 aa12.58□□□□□ -0.4
FOXN3-211ENST00000555855 GRIFINA4D1Z8 144 aa12.58□□□□□ -0.4
FOXN3-211ENST00000555855 KRBOX1C9JBD0 128 aa12.58□□□□□ -0.4
FOXN3-211ENST00000555855 TPT1P13693 172 aaKnown RBP12.58□□□□□ -0.4
FOXN3-211ENST00000555855 ATP6V0CP27449 155 aa12.58□□□□□ -0.4
FOXN3-211ENST00000555855 M0R036 132 aa12.57□□□□□ -0.4
FOXN3-211ENST00000555855 DGAT2L7PQ6IED9 249 aa12.57□□□□□ -0.4
FOXN3-211ENST00000555855 ENHOQ6UWT2 76 aa12.57□□□□□ -0.4
FOXN3-211ENST00000555855 TNFSF18Q9UNG2 199 aa12.57□□□□□ -0.4
FOXN3-211ENST00000555855 M0R381 172 aa12.56□□□□□ -0.4
FOXN3-211ENST00000555855 UBE2D3P61077 147 aa12.56□□□□□ -0.4
FOXN3-211ENST00000555855 UBE2D2P62837 147 aa12.56□□□□□ -0.4
FOXN3-211ENST00000555855 C15orf54Q8N8G6 183 aa12.56□□□□□ -0.4
FOXN3-211ENST00000555855 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.56□□□□□ -0.4
FOXN3-211ENST00000555855 DAZAP1Q96EP5 407 aaKnown RBP12.56□□□□□ -0.4
FOXN3-211ENST00000555855 USP17L23D6RBM5 183 aa12.55□□□□□ -0.4
FOXN3-211ENST00000555855 CRIP1P50238 77 aa12.55□□□□□ -0.4
FOXN3-211ENST00000555855 ZFP30Q9Y2G7 519 aa12.55□□□□□ -0.4
FOXN3-211ENST00000555855 TRBV6-8A0A0A6YYG3 113 aa12.54□□□□□ -0.4
FOXN3-211ENST00000555855 PEX7O00628 323 aa12.54□□□□□ -0.4
FOXN3-211ENST00000555855 ANGP03950 147 aaKnown RBP12.54□□□□□ -0.4
FOXN3-211ENST00000555855 PKIAP61925 76 aa12.54□□□□□ -0.4
FOXN3-211ENST00000555855 IFITM3Q01628 133 aa12.54□□□□□ -0.4
FOXN3-211ENST00000555855 ZFP82Q8N141 532 aa12.54□□□□□ -0.4
FOXN3-211ENST00000555855 HIST1H2BAQ96A08 127 aa12.54□□□□□ -0.4
FOXN3-211ENST00000555855 NKX6-2Q9C056 277 aaPredicted RBP12.54□□□□□ -0.4
FOXN3-211ENST00000555855 PKHD1L1Q86WI1 4243 aa12.53□□□□□ -0.4
FOXN3-211ENST00000555855 SH2D1AO60880 128 aa12.53□□□□□ -0.4
FOXN3-211ENST00000555855 HLA-DQA1P01909 254 aa12.53□□□□□ -0.4
FOXN3-211ENST00000555855 HNRNPA3P51991 378 aaKnown RBP12.53□□□□□ -0.4
FOXN3-211ENST00000555855 UBE2G2P60604 165 aa12.53□□□□□ -0.4
FOXN3-211ENST00000555855 FAM162BQ5T6X4 162 aa12.53□□□□□ -0.4
FOXN3-211ENST00000555855 Q86TA4 180 aa12.53□□□□□ -0.4
FOXN3-211ENST00000555855 C9orf163Q8N9P6 203 aa12.53□□□□□ -0.4
FOXN3-211ENST00000555855 ZC2HC1AQ96GY0 325 aa12.53□□□□□ -0.4
FOXN3-211ENST00000555855 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.41
FOXN3-211ENST00000555855 PRSS1P07477 247 aa12.52□□□□□ -0.41
FOXN3-211ENST00000555855 DEFA1P59665 94 aa12.52□□□□□ -0.41
FOXN3-211ENST00000555855 DEFA3P59666 94 aa12.52□□□□□ -0.41
FOXN3-211ENST00000555855 MIAQ16674 131 aa12.52□□□□□ -0.41
FOXN3-211ENST00000555855 CHCHD5Q9BSY4 110 aa12.52□□□□□ -0.41
FOXN3-211ENST00000555855 A0A0D9SG52 128 aa12.51□□□□□ -0.41
FOXN3-211ENST00000555855 RAB4BP61018 213 aa12.51□□□□□ -0.41
FOXN3-211ENST00000555855 MPV17L2Q567V2 206 aa12.51□□□□□ -0.41
FOXN3-211ENST00000555855 OR10G8Q8NGN5 311 aa12.51□□□□□ -0.41
FOXN3-211ENST00000555855 UBE2G1P62253 170 aa12.5□□□□□ -0.41
FOXN3-211ENST00000555855 COX8CQ7Z4L0 72 aa12.5□□□□□ -0.41
FOXN3-211ENST00000555855 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
FOXN3-211ENST00000555855 CTXND1A0A1B0GTU2 59 aa12.49□□□□□ -0.41
FOXN3-211ENST00000555855 A6NHS1 94 aa12.49□□□□□ -0.41
FOXN3-211ENST00000555855 PTTG1O95997 202 aa12.49□□□□□ -0.41
FOXN3-211ENST00000555855 RPL19P84098 196 aaKnown RBP12.49□□□□□ -0.41
FOXN3-211ENST00000555855 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
FOXN3-211ENST00000555855 Q6ZRU5 148 aa12.49□□□□□ -0.41
FOXN3-211ENST00000555855 DPH3Q96FX2 82 aa12.49□□□□□ -0.41
FOXN3-211ENST00000555855 FMC1Q96HJ9 113 aa12.49□□□□□ -0.41
FOXN3-211ENST00000555855 FAM74A7A6NL05 159 aa12.48□□□□□ -0.41
FOXN3-211ENST00000555855 ZNF56Q15929 161 aa12.48□□□□□ -0.41
FOXN3-211ENST00000555855 ZNF674Q2M3X9 581 aa12.48□□□□□ -0.41
FOXN3-211ENST00000555855 TMEM97Q5BJF2 176 aa12.48□□□□□ -0.41
FOXN3-211ENST00000555855 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.48□□□□□ -0.41
FOXN3-211ENST00000555855 NEXN-AS1Q8NBZ9 246 aa12.47□□□□□ -0.41
FOXN3-211ENST00000555855 CLRN3Q8NCR9 226 aa12.47□□□□□ -0.41
FOXN3-211ENST00000555855 BORCS7-ASMTA0A0B4J1R7 106 aa12.46□□□□□ -0.41
FOXN3-211ENST00000555855 SDIM1Q6ZPB5 146 aa12.46□□□□□ -0.41
FOXN3-211ENST00000555855 F5H697 171 aa12.45□□□□□ -0.42
FOXN3-211ENST00000555855 MT1HL1P0DM35 61 aa12.45□□□□□ -0.42
FOXN3-211ENST00000555855 ZNF726P1Q15940 193 aa12.45□□□□□ -0.42
FOXN3-211ENST00000555855 INO80EQ8NBZ0 244 aaPredicted RBP12.45□□□□□ -0.42
FOXN3-211ENST00000555855 ZNF471Q9BX82 626 aaPredicted RBP12.45□□□□□ -0.42
FOXN3-211ENST00000555855 PRR27Q6MZM9 219 aa12.44□□□□□ -0.42
FOXN3-211ENST00000555855 LINC00269Q8N2A0 174 aa12.44□□□□□ -0.42
FOXN3-211ENST00000555855 PRR34Q9NV39 138 aa12.44□□□□□ -0.42
FOXN3-211ENST00000555855 TRBV6-1A0A0K0K1D8 114 aa12.43□□□□□ -0.42
FOXN3-211ENST00000555855 PANO1I0J062 215 aa12.43□□□□□ -0.42
FOXN3-211ENST00000555855 RBX1P62877 108 aa12.43□□□□□ -0.42
FOXN3-211ENST00000555855 AKR1C8PQ5T2L2 129 aa12.43□□□□□ -0.42
FOXN3-211ENST00000555855 RPL7L1Q6DKI1 246 aaKnown RBP12.43□□□□□ -0.42
FOXN3-211ENST00000555855 CLPSL2Q6UWE3 100 aa12.43□□□□□ -0.42
FOXN3-211ENST00000555855 DPH3P1Q9H4G8 78 aa12.43□□□□□ -0.42
FOXN3-211ENST00000555855 LTAP01374 205 aa12.42□□□□□ -0.42
FOXN3-211ENST00000555855 GAGE6Q13070 117 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms