RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 K7ERJ3 54 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 SYNJ2BPP57105 145 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 C12orf74Q32Q52 190 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 C10orf99Q6UWK7 81 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 Q6YL49 198 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 NEGR1Q7Z3B1 354 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 Q8N1Y9 231 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 JPT2Q9H910 190 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 FSHBP01225 129 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 CRYGDP07320 174 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 HOXD3P31249 432 aaPredicted RBP7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 RHOHQ15669 191 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 ZNF56Q15929 161 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 NSUN5P1Q3KNT7 163 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 FAM74A4Q5TZK3 123 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 TRPT1Q86TN4 253 aaKnown RBP7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 WFDC12Q8WWY7 111 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 NRGNQ92686 78 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 ZNF479Q96JC4 524 aa7.39□□□□□ -1.23
RPGRIP1-208ENST00000555489 COL12A1Q99715 3063 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 CELSR1Q9NYQ6 3014 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 IGLV4-69A0A075B6H9 119 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 TRAV12-2A0A075B6T6 113 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 ZNF815PA8K554 130 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 IGLL5B9A064 214 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 M0QY20 66 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 COX6B1P14854 86 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 SPINK13Q1W4C9 94 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 MDFICQ9P1T7 246 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 MUC4Q99102 2169 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 ZFHX3Q15911 3703 aa7.38□□□□□ -1.23
RPGRIP1-208ENST00000555489 TSHBP01222 138 aa7.37□□□□□ -1.23
RPGRIP1-208ENST00000555489 IGKV3-20P01619 116 aa7.37□□□□□ -1.23
RPGRIP1-208ENST00000555489 SCGB1D4Q6XE38 83 aa7.37□□□□□ -1.23
RPGRIP1-208ENST00000555489 ZNF702PQ9H963 129 aa7.37□□□□□ -1.23
RPGRIP1-208ENST00000555489 ZNF256Q9Y2P7 627 aaPredicted RBP7.37□□□□□ -1.23
RPGRIP1-208ENST00000555489 C11orf86A6NJI1 115 aa7.37□□□□□ -1.23
RPGRIP1-208ENST00000555489 VPS13CQ709C8 3753 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 CFAP46Q8IYW2 2715 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 CACNA1AO00555 2505 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 TRAV2A0A0B4J234 112 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 F8W1H4 67 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 G3V4G9 280 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 ZNF876PQ49A33 203 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 AMTNQ6UX39 209 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 EDA2RQ9HAV5 297 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 SAP30O75446 220 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 RPL39P62891 51 aaKnown RBP7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 RRN3P1Q2M238 152 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 CD300EQ496F6 205 aaPredicted RBP7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 TCTEX1D4Q5JR98 221 aa7.36□□□□□ -1.23
RPGRIP1-208ENST00000555489 I3L3M4 83 aa7.35□□□□□ -1.23
RPGRIP1-208ENST00000555489 HOXA3O43365 443 aaPredicted RBP7.35□□□□□ -1.23
RPGRIP1-208ENST00000555489 IGHV4-31P0DP07 118 aa7.35□□□□□ -1.23
RPGRIP1-208ENST00000555489 SRSF9Q13242 221 aaKnown RBP eCLIP7.35□□□□□ -1.23
RPGRIP1-208ENST00000555489 A8MTW9 85 aa7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 PIK3CD-AS1Q5SR53 167 aa7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 MORN3Q6PF18 240 aaPredicted RBP7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 NFE4Q86UQ8 179 aa7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 Q8N2B8 174 aa7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 PEMTQ9UBM1 199 aa7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 Q5PR19 223 aa7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 TMEM170BQ5T4T1 132 aa7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 C20orf203Q8NBC4 194 aa7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 MAPK1IP1LQ8NDC0 245 aa7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 SPANXB1Q9NS25 103 aaPredicted RBP7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 BEX4Q9NWD9 120 aaPredicted RBP7.34□□□□□ -1.23
RPGRIP1-208ENST00000555489 LRRC75A-AS1Q8N1F1 130 aa7.33□□□□□ -1.24
RPGRIP1-208ENST00000555489 DUX5Q96PT3 197 aa7.33□□□□□ -1.24
RPGRIP1-208ENST00000555489 PIEZO1Q92508 2521 aa7.33□□□□□ -1.24
RPGRIP1-208ENST00000555489 SPG11Q96JI7 2443 aa7.33□□□□□ -1.24
RPGRIP1-208ENST00000555489 A0A0J9YY99 117 aa7.33□□□□□ -1.24
RPGRIP1-208ENST00000555489 UBE2D1P51668 147 aa7.33□□□□□ -1.24
RPGRIP1-208ENST00000555489 COTL1Q14019 142 aa7.33□□□□□ -1.24
RPGRIP1-208ENST00000555489 SPAG8Q99932 426 aaPredicted RBP7.33□□□□□ -1.24
RPGRIP1-208ENST00000555489 USP9XQ93008 2570 aaPredicted RBP7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 A8MWV9 139 aa7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 EMP1P54849 157 aa7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 LYRM7Q5U5X0 104 aa7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 KLHL30-AS1Q8NEE0 82 aa7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 ZNRF2Q8NHG8 242 aa7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 C4orf3Q8WVX3 66 aa7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 PLEKHB2Q96CS7 222 aa7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 MRPL16Q9NX20 251 aaKnown RBP7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 IGSF10Q6WRI0 2623 aa7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 CELSR2Q9HCU4 2923 aa7.32□□□□□ -1.24
RPGRIP1-208ENST00000555489 H3BMM0 161 aa7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 J3QQQ9 107 aa7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 J3QR89 54 aa7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 LGALS3P17931 250 aaKnown RBP7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 CRYBA4P53673 196 aa7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 DEFB131AP59861 70 aa7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 RPL24P83731 157 aaKnown RBP7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 PTH2Q96A98 100 aa7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 PGPEP1Q9NXJ5 209 aa7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 PYGO1Q9Y3Y4 419 aa7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 FLNCQ14315 2725 aa7.31□□□□□ -1.24
RPGRIP1-208ENST00000555489 H3BMG7 143 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms