RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 COX19Q49B96 90 aa7.76□□□□□ -1.17
SHMT2-218ENST00000555213 DMRTA1Q5VZB9 504 aa7.76□□□□□ -1.17
SHMT2-218ENST00000555213 CEMP1Q6PRD7 247 aaPredicted RBP7.76□□□□□ -1.17
SHMT2-218ENST00000555213 ZFP82Q8N141 532 aa7.76□□□□□ -1.17
SHMT2-218ENST00000555213 TPPP3Q9BW30 176 aa7.76□□□□□ -1.17
SHMT2-218ENST00000555213 MRPL18Q9H0U6 180 aaKnown RBP7.76□□□□□ -1.17
SHMT2-218ENST00000555213 TMA7Q9Y2S6 64 aaKnown RBP7.76□□□□□ -1.17
SHMT2-218ENST00000555213 DEFB131BA0A096LNP1 70 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 A0A1B0GW15 77 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 GAGE12BA1L429 117 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 C1orf196B1AJZ1 125 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST1H2BKO60814 126 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 GAGE7O76087 117 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 ATP5G1P05496 136 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST1H2BJP06899 126 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 GAGE12FP0CL80 117 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 GAGE12GP0CL81 117 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 GAGE12IP0CL82 117 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HTN3P15516 51 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST1H2BOP23527 126 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST1H2BBP33778 126 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST1H2BDP58876 126 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST1H2BCP62807 126 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST2H2BEQ16778 126 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 KIAA1644Q3SXP7 199 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.75□□□□□ -1.17
SHMT2-218ENST00000555213 CASC10Q5T4H9 136 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST1H2BHQ93079 126 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 RNF185Q96GF1 192 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST1H2BNQ99877 126 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 HIST1H2BMQ99879 126 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 KIF25-AS1Q9Y6Z4 181 aa7.75□□□□□ -1.17
SHMT2-218ENST00000555213 M0R2P5 195 aa7.74□□□□□ -1.17
SHMT2-218ENST00000555213 HLA-DQA1P01909 254 aa7.74□□□□□ -1.17
SHMT2-218ENST00000555213 LINC00315P59091 139 aa7.74□□□□□ -1.17
SHMT2-218ENST00000555213 CACNG7P62955 275 aa7.74□□□□□ -1.17
SHMT2-218ENST00000555213 TWIST1Q15672 202 aa7.74□□□□□ -1.17
SHMT2-218ENST00000555213 FAM104BQ5XKR9 115 aa7.74□□□□□ -1.17
SHMT2-218ENST00000555213 Q6ZTI0 123 aa7.74□□□□□ -1.17
SHMT2-218ENST00000555213 LINC00612Q8N6U2 182 aa7.74□□□□□ -1.17
SHMT2-218ENST00000555213 TMEM191AQ9H0A3 160 aa7.74□□□□□ -1.17
SHMT2-218ENST00000555213 MRPL16Q9NX20 251 aaKnown RBP7.74□□□□□ -1.17
SHMT2-218ENST00000555213 APCSP02743 223 aa7.73□□□□□ -1.17
SHMT2-218ENST00000555213 MT-ND6P03923 174 aa7.73□□□□□ -1.17
SHMT2-218ENST00000555213 RAB4AP20338 218 aa7.73□□□□□ -1.17
SHMT2-218ENST00000555213 EVI2AP22794 236 aa7.73□□□□□ -1.17
SHMT2-218ENST00000555213 RAB4BP61018 213 aa7.73□□□□□ -1.17
SHMT2-218ENST00000555213 PTH2Q96A98 100 aa7.73□□□□□ -1.17
SHMT2-218ENST00000555213 NDUFAF3Q9BU61 184 aa7.73□□□□□ -1.17
SHMT2-218ENST00000555213 JPT2Q9H910 190 aa7.73□□□□□ -1.17
SHMT2-218ENST00000555213 F5H768 121 aa7.72□□□□□ -1.17
SHMT2-218ENST00000555213 GAS8-AS1O95177 125 aa7.72□□□□□ -1.17
SHMT2-218ENST00000555213 TCTAP57738 103 aa7.72□□□□□ -1.17
SHMT2-218ENST00000555213 RAB5BP61020 215 aa7.72□□□□□ -1.17
SHMT2-218ENST00000555213 AMN1Q8IY45 258 aa7.72□□□□□ -1.17
SHMT2-218ENST00000555213 POM121L12Q8N7R1 296 aa7.72□□□□□ -1.17
SHMT2-218ENST00000555213 SYT8Q8NBV8 401 aa7.72□□□□□ -1.17
SHMT2-218ENST00000555213 C18orf15Q96N68 181 aa7.72□□□□□ -1.17
SHMT2-218ENST00000555213 ALKBH7Q9BT30 221 aaPredicted RBP7.72□□□□□ -1.17
SHMT2-218ENST00000555213 PHLDA3Q9Y5J5 127 aa7.72□□□□□ -1.17
SHMT2-218ENST00000555213 IGLL5B9A064 214 aa7.71□□□□□ -1.18
SHMT2-218ENST00000555213 M0R381 172 aa7.71□□□□□ -1.18
SHMT2-218ENST00000555213 CRYGDP07320 174 aa7.71□□□□□ -1.18
SHMT2-218ENST00000555213 ZNF876PQ49A33 203 aa7.71□□□□□ -1.18
SHMT2-218ENST00000555213 MRPL51Q4U2R6 128 aaKnown RBP7.71□□□□□ -1.18
SHMT2-218ENST00000555213 SPANXN1Q5VSR9 72 aa7.71□□□□□ -1.18
SHMT2-218ENST00000555213 RASL10AQ92737 203 aa7.71□□□□□ -1.18
SHMT2-218ENST00000555213 BORCS7Q96B45 105 aa7.71□□□□□ -1.18
SHMT2-218ENST00000555213 SAMD10Q9BYL1 202 aa7.71□□□□□ -1.18
SHMT2-218ENST00000555213 C5orf52A6NGY3 159 aa7.7□□□□□ -1.18
SHMT2-218ENST00000555213 NUPR1O60356 82 aa7.7□□□□□ -1.18
SHMT2-218ENST00000555213 S100A8P05109 93 aa7.7□□□□□ -1.18
SHMT2-218ENST00000555213 LINC00310P59036 64 aa7.7□□□□□ -1.18
SHMT2-218ENST00000555213 Q0VG73 95 aa7.7□□□□□ -1.18
SHMT2-218ENST00000555213 COA6Q5JTJ3 125 aaKnown RBP7.7□□□□□ -1.18
SHMT2-218ENST00000555213 PIK3CD-AS1Q5SR53 167 aa7.7□□□□□ -1.18
SHMT2-218ENST00000555213 LCE2DQ5TA82 110 aaPredicted RBP7.7□□□□□ -1.18
SHMT2-218ENST00000555213 TRAV4A0A0B4J268 109 aa7.69□□□□□ -1.18
SHMT2-218ENST00000555213 LOC105371267A0A1B0GV96 52 aa7.69□□□□□ -1.18
SHMT2-218ENST00000555213 NDUFA6P56556 154 aa7.69□□□□□ -1.18
SHMT2-218ENST00000555213 SNRPEP62304 92 aaKnown RBP7.69□□□□□ -1.18
SHMT2-218ENST00000555213 UFSP1Q6NVU6 142 aa7.69□□□□□ -1.18
SHMT2-218ENST00000555213 C14orf178Q8N769 122 aaPredicted RBP7.69□□□□□ -1.18
SHMT2-218ENST00000555213 OR4C5Q8NGB2 326 aa7.69□□□□□ -1.18
SHMT2-218ENST00000555213 URB1-AS1Q96HZ7 61 aa7.69□□□□□ -1.18
SHMT2-218ENST00000555213 TRGV4A0A0C4DH28 118 aa7.68□□□□□ -1.18
SHMT2-218ENST00000555213 A8MWV9 139 aa7.68□□□□□ -1.18
SHMT2-218ENST00000555213 SMKR1H3BMG3 65 aa7.68□□□□□ -1.18
SHMT2-218ENST00000555213 CIDEAO60543 219 aa7.68□□□□□ -1.18
SHMT2-218ENST00000555213 IGHV3-53P01767 116 aa7.68□□□□□ -1.18
SHMT2-218ENST00000555213 GATA1P15976 413 aaPredicted RBP7.68□□□□□ -1.18
SHMT2-218ENST00000555213 HOXA5P20719 270 aa7.68□□□□□ -1.18
SHMT2-218ENST00000555213 SRIP30626 198 aa7.68□□□□□ -1.18
SHMT2-218ENST00000555213 C15orf53Q8NAA6 179 aa7.68□□□□□ -1.18
SHMT2-218ENST00000555213 C18orf32Q8TCD1 76 aa7.68□□□□□ -1.18
SHMT2-218ENST00000555213 IFITM10A6NMD0 228 aa7.67□□□□□ -1.18
SHMT2-218ENST00000555213 IQCJQ1A5X6 159 aa7.67□□□□□ -1.18
SHMT2-218ENST00000555213 NRACQ8N912 160 aa7.67□□□□□ -1.18
SHMT2-218ENST00000555213 NACAE9PAV3 2078 aa7.66□□□□□ -1.18
SHMT2-218ENST00000555213 TRAV26-1A0A087WT03 109 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms