RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 NRN1Q9NPD7 142 aa3.78□□□□□ -1.8
LINC01550-204ENST00000554822 TENM2Q9NT68 2774 aa3.78□□□□□ -1.8
LINC01550-204ENST00000554822 IGHV3OR16-8A0A075B7F1 116 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 IGKV2-40A0A087WW87 121 aaPredicted RBP3.77□□□□□ -1.81
LINC01550-204ENST00000554822 TRAV8-2A0A0B4J237 113 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 IGHV7-4-1A0A0J9YVY3 117 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 EPM2AB3EWF7 344 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 SPINK4O60575 86 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 NDUFA7O95182 113 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 IGKV2D-40P01614 121 aaPredicted RBP3.77□□□□□ -1.81
LINC01550-204ENST00000554822 RPS20P60866 119 aaKnown RBP3.77□□□□□ -1.81
LINC01550-204ENST00000554822 RAB4BP61018 213 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 SLC35B1P78383 322 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 JOSD1Q15040 202 aaPredicted RBP3.77□□□□□ -1.81
LINC01550-204ENST00000554822 PDZD11Q5EBL8 140 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 TCTEX1D4Q5JR98 221 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 FAM162BQ5T6X4 162 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 SAMD13Q5VXD3 122 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 TCF24Q7RTU0 167 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 BAGE3Q86Y29 109 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 GPHB5Q86YW7 130 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 Q8N2B8 174 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 TMEM86BQ8N661 226 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 MYOZ3Q8TDC0 251 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 DAZ1Q9NQZ3 744 aaKnown RBP3.77□□□□□ -1.81
LINC01550-204ENST00000554822 PEF1Q9UBV8 284 aaKnown RBP3.77□□□□□ -1.81
LINC01550-204ENST00000554822 ZMAT5Q9UDW3 170 aaKnown RBP3.77□□□□□ -1.81
LINC01550-204ENST00000554822 TP53TG3Q9ULZ0 132 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 UFC1Q9Y3C8 167 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 LENEPQ9Y5L5 61 aa3.77□□□□□ -1.81
LINC01550-204ENST00000554822 ABCA1O95477 2261 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 IGHV3-66A0A0C4DH42 116 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 A0A1B0GUT8 65 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 GRIFINA4D1Z8 144 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 TMEM189A5PLL7 270 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 FABP5P3A8MUU1 101 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 ZNF705FA8MVS1 300 aaPredicted RBP3.76□□□□□ -1.81
LINC01550-204ENST00000554822 OVOL1O14753 267 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 SH2D1AO60880 128 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 SERF1AO75920 110 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 TRBV12-3P01733 135 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 IGHV3-11P01762 117 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 HLA-DMBP28068 263 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 SRIP30626 198 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 ZNF138P52744 262 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 PKIAP61925 76 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 HIST1H1AQ02539 215 aaPredicted RBP3.76□□□□□ -1.81
LINC01550-204ENST00000554822 SLAQ13239 276 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 RIGQ13278 110 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 TMEM78Q5T7P6 136 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 GDF5OSQ5U4N7 250 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 UNQ9165/PRO28630Q6UXU0 137 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 ZNF493Q6ZR52 646 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 TMEM256Q8N2U0 113 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 C11orf45Q8TAV5 145 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 C18orf32Q8TCD1 76 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 BORCS7Q96B45 105 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 PGLYRP4Q96LB8 373 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 UBE2E2Q96LR5 201 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 FOXC2Q99958 501 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 AGPAT4-IT1Q9H0P7 198 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 VCX2Q9H322 139 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 ZNF702PQ9H963 129 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 SMPXQ9UHP9 88 aa3.76□□□□□ -1.81
LINC01550-204ENST00000554822 IGHV3OR16-13A0A075B7E8 117 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 LOC102724200A0A096LPH7 203 aaPredicted RBP3.75□□□□□ -1.81
LINC01550-204ENST00000554822 IGHV3-49A0A0A0MS15 119 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 IGHV3-74A0A0B4J1X5 117 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 TRBV7-9A0A0J9YWB2 115 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 F2Z2F3 143 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 TSTD3H0UI37 97 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 K7EQD1 137 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 LGALS9O00182 355 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 ZNF207O43670 478 aaKnown RBP3.75□□□□□ -1.81
LINC01550-204ENST00000554822 NUPR1O60356 82 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 GPX1P07203 203 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 LGALS1P09382 135 aaKnown RBP3.75□□□□□ -1.81
LINC01550-204ENST00000554822 IGLC6P0CF74 106 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 GZMBP10144 247 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 CTRLP40313 264 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 DEFA6Q01524 100 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 RNF182Q8N6D2 247 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 Q8TAT8 98 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 KCNS1Q96KK3 526 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 LINC00477Q96M19 166 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 RCHY1Q96PM5 261 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 RHPN1-AS1Q9BWJ2 59 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 Q9HAA7 133 aa3.75□□□□□ -1.81
LINC01550-204ENST00000554822 A0A1B0GUS0 222 aa3.74□□□□□ -1.81
LINC01550-204ENST00000554822 ARMS2P0C7Q2 107 aa3.74□□□□□ -1.81
LINC01550-204ENST00000554822 ZNF80P51504 273 aaPredicted RBP3.74□□□□□ -1.81
LINC01550-204ENST00000554822 PRKDCP78527 4128 aaKnown RBP3.74□□□□□ -1.81
LINC01550-204ENST00000554822 ERCC8Q13216 396 aa3.74□□□□□ -1.81
LINC01550-204ENST00000554822 IQCJQ1A5X6 159 aa3.74□□□□□ -1.81
LINC01550-204ENST00000554822 MUC21Q5SSG8 566 aa3.74□□□□□ -1.81
LINC01550-204ENST00000554822 LYZL1Q6UWQ5 148 aa3.74□□□□□ -1.81
LINC01550-204ENST00000554822 APRG1Q8IVJ8 170 aa3.74□□□□□ -1.81
LINC01550-204ENST00000554822 Q8N377 158 aa3.74□□□□□ -1.81
LINC01550-204ENST00000554822 SIGLECL1Q8N7X8 197 aa3.74□□□□□ -1.81
LINC01550-204ENST00000554822 FER1L6-AS1Q8NA97 138 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms