RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 C7orf71A4D174 169 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 G3V4G9 280 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 SMKR1H3BMG3 65 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 S100A9P06702 114 aaKnown RBP4.19□□□□□ -1.74
ATXN3-230ENST00000554673 RPS10P46783 165 aaKnown RBP4.19□□□□□ -1.74
ATXN3-230ENST00000554673 HERV-K104P63124 156 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 SMUG1Q53HV7 270 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 FAM162BQ5T6X4 162 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 UFSP1Q6NVU6 142 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 ERASQ7Z444 233 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 LINC00477Q96M19 166 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 CHTOPQ9Y3Y2 248 aaKnown RBP4.19□□□□□ -1.74
ATXN3-230ENST00000554673 LENEPQ9Y5L5 61 aa4.19□□□□□ -1.74
ATXN3-230ENST00000554673 NBEAL1Q6ZS30 2694 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 COL7A1Q02388 2944 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 IGHV4-4A0A075B6R2 117 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 A0A096LNJ9 63 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 IGHV4-28A0A0C4DH34 117 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 TRBV7-9A0A0J9YWB2 115 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 H3BVH4 76 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 P01737 135 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 PRB2P02812 416 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-230ENST00000554673 RPL35AP18077 110 aaKnown RBP4.18□□□□□ -1.74
ATXN3-230ENST00000554673 CSN1S1P47710 185 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 EGFEM1PQ0D2K5 195 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 FABP9Q0Z7S8 132 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 TDRG1Q3Y452 100 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 SPATA12Q7Z6I5 190 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 OR4B1Q8NGF8 309 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 DYNLRB2Q8TF09 96 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 ALKBH7Q9BT30 221 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-230ENST00000554673 U3KQK5 164 aa4.18□□□□□ -1.74
ATXN3-230ENST00000554673 TMEM189A5PLL7 270 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 FABP5P3A8MUU1 101 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 PPP1R2P9O14990 202 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 COA6Q5JTJ3 125 aaKnown RBP4.17□□□□□ -1.74
ATXN3-230ENST00000554673 SAPCD1Q5SSQ6 148 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 TMEM78Q5T7P6 136 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 ZNF493Q6ZR52 646 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 LINC00173Q6ZV60 143 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 AMN1Q8IY45 258 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 NRACQ8N912 160 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 Q8N976 141 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 OR10J6PQ8NGY7 276 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 GFRA4Q9GZZ7 299 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 RETNQ9HD89 108 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 XCL2Q9UBD3 114 aa4.17□□□□□ -1.74
ATXN3-230ENST00000554673 PRKDCP78527 4128 aaKnown RBP4.16□□□□□ -1.74
ATXN3-230ENST00000554673 IGLV2-18A0A075B6J9 118 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 TRAV9-1A0A075B6T8 112 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 TRAV26-2A0A0B4J265 109 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 SNURFLB1AK76 121 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 NCR2O95944 276 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 NPYP01303 97 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 ORM1P02763 201 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 CRYGDP07320 174 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 OR5AL1P0C617 328 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 NTF3P20783 257 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 EVI2AP22794 236 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 MRPL51Q4U2R6 128 aaKnown RBP4.16□□□□□ -1.74
ATXN3-230ENST00000554673 ZNF705AQ6ZN79 300 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-230ENST00000554673 HIST3H2BBQ8N257 126 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 FER1L6-AS1Q8NA97 138 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 C18orf32Q8TCD1 76 aa4.16□□□□□ -1.74
ATXN3-230ENST00000554673 LOC102724200A0A096LPH7 203 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-230ENST00000554673 TRAV21A0A0B4J279 112 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 hDV102S1A0JD36 115 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 FAM231BA6NCW3 169 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 OR4C46A6NHA9 309 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 FBLL1A6NHQ2 334 aaKnown RBP4.15□□□□□ -1.75
ATXN3-230ENST00000554673 A8MWL6 223 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 OR11H12B2RN74 326 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 K7EIL1 84 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 GAGE7O76087 117 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 GPX1P07203 203 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 GAGE12FP0CL80 117 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 GAGE12GP0CL81 117 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 GAGE12IP0CL82 117 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 P0DMU3 169 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 FAM231AP0DMU4 169 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 FAM231CP0DMU5 169 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 RAB4AP20338 218 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 ID1P41134 155 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 CDKN1BP46527 198 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 GAGE1Q13065 139 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 GAGE4Q13068 117 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 S100A7AQ86SG5 101 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 OR2K2Q8NGT1 345 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 RASL10AQ92737 203 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 FAM104AQ969W3 186 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 BTF3L4Q96K17 158 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 LINC00467Q9BRT7 94 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 GNB1LQ9BYB4 327 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 NAT8BQ9UHF3 227 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 NAGKQ9UJ70 344 aa4.15□□□□□ -1.75
ATXN3-230ENST00000554673 IGHV1OR15-1A0A075B7D0 117 aa4.14□□□□□ -1.75
ATXN3-230ENST00000554673 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
ATXN3-230ENST00000554673 AMBPP02760 352 aa4.14□□□□□ -1.75
ATXN3-230ENST00000554673 SRIP30626 198 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms