RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 MUC7Q8TAX7 377 aa2.48□□□□□ -2.01
SEC23A-207ENST00000554615 LINC01560Q8TB33 94 aa2.48□□□□□ -2.01
SEC23A-207ENST00000554615 DAZAP1Q96EP5 407 aaKnown RBP2.48□□□□□ -2.01
SEC23A-207ENST00000554615 C1QTNF4Q9BXJ3 329 aa2.48□□□□□ -2.01
SEC23A-207ENST00000554615 MRPL35Q9NZE8 188 aaKnown RBP2.48□□□□□ -2.01
SEC23A-207ENST00000554615 IGHV3OR16-10A0A075B7F0 116 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 IGHV4-31P0DP07 118 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 IGHV4-38-2P0DP08 117 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 FA2HQ7L5A8 372 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 TRPT1Q86TN4 253 aaKnown RBP2.47□□□□□ -2.01
SEC23A-207ENST00000554615 TSSC4Q9Y5U2 329 aaPredicted RBP2.47□□□□□ -2.01
SEC23A-207ENST00000554615 FBN2P35556 2912 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 IGHV4-61A0A0C4DH41 118 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 IGHV3-64DA0A0J9YX35 117 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 TRBV12-3P01733 135 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 IGHV3-33P01772 117 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 SLC35B1P78383 322 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 AMMECR1LQ6DCA0 310 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 DYNLRB1Q9NP97 96 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 PRRC2CQ9Y520 2896 aaKnown RBP2.47□□□□□ -2.01
SEC23A-207ENST00000554615 OTOGLQ3ZCN5 2332 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 LYNX1G3V0Z9 82 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 RHODO00212 210 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 VCYO14598 125 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 MSMBP08118 114 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 SMIM13P0DJ93 91 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 LYNX1P0DP58 116 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 CKS2P33552 79 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 HINT1P49773 126 aaPredicted RBP2.47□□□□□ -2.01
SEC23A-207ENST00000554615 GTF2H5Q6ZYL4 71 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 ZNF418Q8TF45 676 aaPredicted RBP2.47□□□□□ -2.01
SEC23A-207ENST00000554615 SPXQ9BT56 116 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 FAM103A1Q9BTL3 118 aaKnown RBP2.47□□□□□ -2.01
SEC23A-207ENST00000554615 CELA1Q9UNI1 258 aa2.47□□□□□ -2.01
SEC23A-207ENST00000554615 IGHV4-28A0A0C4DH34 117 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 TRBV10-1A0A0K0K1A3 114 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 DUSP14O95147 198 aaKnown RBP2.46□□□□□ -2.02
SEC23A-207ENST00000554615 ARL3P36405 182 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 DLX1P56177 255 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 C10orf126Q8N4M7 172 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 RNF182Q8N6D2 247 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 AP1S3Q96PC3 154 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 LAMA5O15230 3695 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 BOD1L1Q8NFC6 3051 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 IGHV3-72A0A0B4J1Y9 119 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 CCL21O00585 134 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 HOXA3O43365 443 aaPredicted RBP2.46□□□□□ -2.02
SEC23A-207ENST00000554615 ASIPP42127 132 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 CD300EQ496F6 205 aaPredicted RBP2.46□□□□□ -2.02
SEC23A-207ENST00000554615 SAMD5Q5TGI4 173 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 VHLLQ6RSH7 139 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 LINC01356Q8N9X3 169 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 VPREB3Q9UKI3 123 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 A8MZ25 164 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 H3BMM0 161 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 GATA1P15976 413 aaPredicted RBP2.46□□□□□ -2.02
SEC23A-207ENST00000554615 CAMPP49913 170 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 ZNF415Q09FC8 603 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 TMEM78Q5T7P6 136 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 SVIPQ8NHG7 77 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 Q8TAT8 98 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 PLEKHB2Q96CS7 222 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 BPESC1Q9GZL8 116 aa2.46□□□□□ -2.02
SEC23A-207ENST00000554615 G3V318 75 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 Q6ZS46 218 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 VSIG2Q96IQ7 327 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 TRGV11A0A075B6L2 103 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 IGHV1OR15-1A0A075B7D0 117 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 IGHV3-35A0A0C4DH35 117 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 IGHV1-58A0A0C4DH39 117 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 SMKR1H3BMG3 65 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 MIAQ16674 131 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 PRSS3P2Q8NHM4 247 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 CITED2Q99967 270 aaPredicted RBP2.45□□□□□ -2.02
SEC23A-207ENST00000554615 KMT2BQ9UMN6 2715 aaPredicted RBP2.45□□□□□ -2.02
SEC23A-207ENST00000554615 B4DSR2 109 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 I3L3M4 83 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 C5orf38Q86SI9 138 aa2.45□□□□□ -2.02
SEC23A-207ENST00000554615 RPL39LQ96EH5 51 aaKnown RBP2.45□□□□□ -2.02
SEC23A-207ENST00000554615 A0A1B0GX51 115 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 A8MWV9 139 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 H3BT86 120 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 NHLRC4P0CG21 123 aaPredicted RBP2.44□□□□□ -2.02
SEC23A-207ENST00000554615 ZC2HC1BQ5TFG8 222 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 C15orf53Q8NAA6 179 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 KIR2DL5BQ8NHK3 375 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 HINT2Q9BX68 163 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 IMUPQ9GZP8 106 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 DSPP15924 2871 aaKnown RBP2.44□□□□□ -2.02
SEC23A-207ENST00000554615 IGHV4-30-2A0A087WSY4 118 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 TRAV40A0A0B4J280 105 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 HSBP1L1C9JCN9 74 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 IGHV3-48P01763 117 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 PF4P02776 101 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 CLEC19AQ6UXS0 136 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 TEN1Q86WV5 123 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 CSMD1Q96PZ7 3565 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 GVQW2A0A096LPI5 108 aaPredicted RBP2.44□□□□□ -2.02
SEC23A-207ENST00000554615 TMEM238LA0A1B0GVL6 79 aa2.44□□□□□ -2.02
SEC23A-207ENST00000554615 K7ERU9 68 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms