RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TWIST1Q15672 202 aa8.97□□□□□ -0.97
SHMT2-214ENST00000554604 EBLN2Q6P2I7 272 aa8.97□□□□□ -0.97
SHMT2-214ENST00000554604 FOXI2Q6ZQN5 318 aa8.97□□□□□ -0.97
SHMT2-214ENST00000554604 CSNK1G2-AS1Q8NCQ2 148 aa8.97□□□□□ -0.97
SHMT2-214ENST00000554604 KLLNB2CW77 178 aa8.96□□□□□ -0.98
SHMT2-214ENST00000554604 F6UB75 175 aa8.96□□□□□ -0.98
SHMT2-214ENST00000554604 LINC00614P0C842 121 aa8.96□□□□□ -0.98
SHMT2-214ENST00000554604 RBMY1A1P0DJD3 496 aaKnown RBP8.96□□□□□ -0.98
SHMT2-214ENST00000554604 RBMY1CP0DJD4 496 aa8.96□□□□□ -0.98
SHMT2-214ENST00000554604 RBMY1FQ15415 496 aaKnown RBP8.96□□□□□ -0.98
SHMT2-214ENST00000554604 MRPL51Q4U2R6 128 aaKnown RBP8.96□□□□□ -0.98
SHMT2-214ENST00000554604 AMN1Q8IY45 258 aa8.96□□□□□ -0.98
SHMT2-214ENST00000554604 ORMDL3Q8N138 153 aa8.96□□□□□ -0.98
SHMT2-214ENST00000554604 X6R8D5 127 aa8.96□□□□□ -0.98
SHMT2-214ENST00000554604 PLECQ15149 4684 aaKnown RBP8.95□□□□□ -0.98
SHMT2-214ENST00000554604 M0R2Z0 102 aa8.95□□□□□ -0.98
SHMT2-214ENST00000554604 DUSP14O95147 198 aaKnown RBP8.95□□□□□ -0.98
SHMT2-214ENST00000554604 PPBPP02775 128 aa8.95□□□□□ -0.98
SHMT2-214ENST00000554604 LEPP41159 167 aa8.95□□□□□ -0.98
SHMT2-214ENST00000554604 FXYD7P58549 80 aa8.95□□□□□ -0.98
SHMT2-214ENST00000554604 FAM19A2Q8N3H0 131 aa8.95□□□□□ -0.98
SHMT2-214ENST00000554604 DNAH1Q9P2D7 4330 aa8.95□□□□□ -0.98
SHMT2-214ENST00000554604 IGHV3OR16-12A0A075B7B8 117 aa8.94□□□□□ -0.98
SHMT2-214ENST00000554604 A0A0J9YX75 114 aa8.94□□□□□ -0.98
SHMT2-214ENST00000554604 D6R8Y8 96 aa8.94□□□□□ -0.98
SHMT2-214ENST00000554604 TSTD3H0UI37 97 aa8.94□□□□□ -0.98
SHMT2-214ENST00000554604 KRTDAPP60985 99 aa8.94□□□□□ -0.98
SHMT2-214ENST00000554604 RNF185Q96GF1 192 aa8.94□□□□□ -0.98
SHMT2-214ENST00000554604 PRELID3AQ96N28 172 aa8.94□□□□□ -0.98
SHMT2-214ENST00000554604 CLUHP3Q96NS8 147 aa8.94□□□□□ -0.98
SHMT2-214ENST00000554604 LAMTOR2Q9Y2Q5 125 aa8.94□□□□□ -0.98
SHMT2-214ENST00000554604 MUC21A0A0G2JKD1 596 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 MUC21A0A140T8X8 626 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 C3orf79P0CE67 100 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 RNASE4P34096 147 aaKnown RBP8.93□□□□□ -0.98
SHMT2-214ENST00000554604 ASIPP42127 132 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 MUC21Q5SSG8 566 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 TEX43Q6ZNM6 134 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 Q6ZQT7 251 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 SMIM15Q7Z3B0 74 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 ZNF664Q8N3J9 261 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 Q8N976 141 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 OR10AG1Q8NH19 301 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 MSRB1Q9NZV6 116 aa8.93□□□□□ -0.98
SHMT2-214ENST00000554604 ALMS1Q8TCU4 4167 aa8.92□□□□□ -0.98
SHMT2-214ENST00000554604 IGHV1-24A0A0C4DH33 117 aa8.92□□□□□ -0.98
SHMT2-214ENST00000554604 LINC00587B1AMM8 73 aa8.92□□□□□ -0.98
SHMT2-214ENST00000554604 IGLL5B9A064 214 aa8.92□□□□□ -0.98
SHMT2-214ENST00000554604 J3KRW8 73 aa8.92□□□□□ -0.98
SHMT2-214ENST00000554604 CKS2P33552 79 aa8.92□□□□□ -0.98
SHMT2-214ENST00000554604 ANXA2RQ3ZCQ2 193 aa8.92□□□□□ -0.98
SHMT2-214ENST00000554604 ZNF705AQ6ZN79 300 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-214ENST00000554604 FA2HQ7L5A8 372 aa8.92□□□□□ -0.98
SHMT2-214ENST00000554604 SCRT2Q9NQ03 307 aa8.92□□□□□ -0.98
SHMT2-214ENST00000554604 GOLT1BQ9Y3E0 138 aa8.92□□□□□ -0.98
SHMT2-214ENST00000554604 TRAV10A0A0B4J240 114 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 C7orf71A4D174 169 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 SMIM9A6NGZ8 99 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 A8MTW9 85 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 H3BVH4 76 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 TSPOP30536 169 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 EMP1P54849 157 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 TCTAP57738 103 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 SSTP61278 116 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 SPANXN1Q5VSR9 72 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 Q6ZTC4 211 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 PRSS3P2Q8NHM4 247 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 AP5S1Q9NUS5 200 aa8.91□□□□□ -0.98
SHMT2-214ENST00000554604 NPYP01303 97 aa8.9□□□□□ -0.98
SHMT2-214ENST00000554604 BTF3P20290 206 aaKnown RBP8.9□□□□□ -0.98
SHMT2-214ENST00000554604 S100A4P26447 101 aaKnown RBP8.9□□□□□ -0.98
SHMT2-214ENST00000554604 KIR3DS1Q14943 382 aa8.9□□□□□ -0.98
SHMT2-214ENST00000554604 LGALS9CQ6DKI2 356 aa8.9□□□□□ -0.98
SHMT2-214ENST00000554604 TMEM208Q9BTX3 173 aa8.9□□□□□ -0.98
SHMT2-214ENST00000554604 PRO1933Q9H354 126 aa8.9□□□□□ -0.98
SHMT2-214ENST00000554604 CELA1Q9UNI1 258 aa8.9□□□□□ -0.98
SHMT2-214ENST00000554604 LINC01546A6NGU7 62 aa8.89□□□□□ -0.99
SHMT2-214ENST00000554604 NXPH4O95158 308 aa8.89□□□□□ -0.99
SHMT2-214ENST00000554604 LEPROTL1O95214 131 aa8.89□□□□□ -0.99
SHMT2-214ENST00000554604 SPART-AS1P0CW21 52 aa8.89□□□□□ -0.99
SHMT2-214ENST00000554604 DDTP30046 118 aa8.89□□□□□ -0.99
SHMT2-214ENST00000554604 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
SHMT2-214ENST00000554604 TDRG1Q3Y452 100 aa8.89□□□□□ -0.99
SHMT2-214ENST00000554604 FAM159AQ6UWV7 190 aa8.89□□□□□ -0.99
SHMT2-214ENST00000554604 MAP1LC3AQ9H492 121 aa8.89□□□□□ -0.99
SHMT2-214ENST00000554604 HSPB8Q9UJY1 196 aa8.89□□□□□ -0.99
SHMT2-214ENST00000554604 HYDINQ4G0P3 5121 aa8.88□□□□□ -0.99
SHMT2-214ENST00000554604 DEFB131BA0A096LNP1 70 aa8.88□□□□□ -0.99
SHMT2-214ENST00000554604 PRSS47A8MTI9 375 aa8.88□□□□□ -0.99
SHMT2-214ENST00000554604 SMKR1H3BMG3 65 aa8.88□□□□□ -0.99
SHMT2-214ENST00000554604 CRXO43186 299 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-214ENST00000554604 RNASE3P12724 160 aaKnown RBP8.88□□□□□ -0.99
SHMT2-214ENST00000554604 EVI2AP22794 236 aa8.88□□□□□ -0.99
SHMT2-214ENST00000554604 IFI27P40305 119 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-214ENST00000554604 CDKN1BP46527 198 aa8.88□□□□□ -0.99
SHMT2-214ENST00000554604 RRN3P1Q2M238 152 aa8.88□□□□□ -0.99
SHMT2-214ENST00000554604 C12orf74Q32Q52 190 aa8.88□□□□□ -0.99
SHMT2-214ENST00000554604 AMTNQ6UX39 209 aa8.88□□□□□ -0.99
SHMT2-214ENST00000554604 MRAP2Q96G30 205 aa8.88□□□□□ -0.99
SHMT2-214ENST00000554604 C20orf144Q9BQM9 153 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms