RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 FBN2P35556 2912 aa11.71□□□□□ -0.54
ARHGEF40-203ENST00000554514 ZNF256Q9Y2P7 627 aaPredicted RBP11.71□□□□□ -0.54
ARHGEF40-203ENST00000554514 ZNF462Q96JM2 2506 aa11.71□□□□□ -0.54
ARHGEF40-203ENST00000554514 MED14OSP0DP75 135 aa11.7□□□□□ -0.54
ARHGEF40-203ENST00000554514 K7EMT4 169 aa11.7□□□□□ -0.54
ARHGEF40-203ENST00000554514 LINC00315P59091 139 aa11.7□□□□□ -0.54
ARHGEF40-203ENST00000554514 CD300EQ496F6 205 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF40-203ENST00000554514 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
ARHGEF40-203ENST00000554514 CYSLTR1Q9Y271 337 aa11.7□□□□□ -0.54
ARHGEF40-203ENST00000554514 ZNF56Q15929 161 aa11.7□□□□□ -0.54
ARHGEF40-203ENST00000554514 HIST2H2BDQ6DRA6 164 aa11.7□□□□□ -0.54
ARHGEF40-203ENST00000554514 KIF25-AS1Q9Y6Z4 181 aa11.7□□□□□ -0.54
ARHGEF40-203ENST00000554514 PTPN13Q12923 2485 aa11.69□□□□□ -0.54
ARHGEF40-203ENST00000554514 MXRA5Q9NR99 2828 aa11.69□□□□□ -0.54
ARHGEF40-203ENST00000554514 SLC25A16P16260 332 aa11.69□□□□□ -0.54
ARHGEF40-203ENST00000554514 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
ARHGEF40-203ENST00000554514 K7ERU9 68 aa11.69□□□□□ -0.54
ARHGEF40-203ENST00000554514 PRADC1Q9BSG0 188 aa11.69□□□□□ -0.54
ARHGEF40-203ENST00000554514 IGHV4OR15-8A0A075B7B6 117 aa11.68□□□□□ -0.54
ARHGEF40-203ENST00000554514 A0A087WW49 117 aa11.68□□□□□ -0.54
ARHGEF40-203ENST00000554514 MYMXA0A1B0GTQ4 84 aa11.68□□□□□ -0.54
ARHGEF40-203ENST00000554514 Q8N1Y9 231 aa11.68□□□□□ -0.54
ARHGEF40-203ENST00000554514 BEX4Q9NWD9 120 aaPredicted RBP11.68□□□□□ -0.54
ARHGEF40-203ENST00000554514 CUBNO60494 3623 aa11.68□□□□□ -0.54
ARHGEF40-203ENST00000554514 SDHAF1A6NFY7 115 aa11.68□□□□□ -0.54
ARHGEF40-203ENST00000554514 DEFB136Q30KP8 78 aa11.68□□□□□ -0.54
ARHGEF40-203ENST00000554514 TM2D2Q9BX73 214 aa11.68□□□□□ -0.54
ARHGEF40-203ENST00000554514 ZFP2Q6ZN57 461 aa11.67□□□□□ -0.54
ARHGEF40-203ENST00000554514 KLHL30-AS1Q8NEE0 82 aa11.67□□□□□ -0.54
ARHGEF40-203ENST00000554514 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
ARHGEF40-203ENST00000554514 A0A0J9YX75 114 aa11.67□□□□□ -0.54
ARHGEF40-203ENST00000554514 SCGB1D4Q6XE38 83 aa11.67□□□□□ -0.54
ARHGEF40-203ENST00000554514 PHLDA1Q8WV24 401 aaPredicted RBP11.67□□□□□ -0.54
ARHGEF40-203ENST00000554514 TLN2Q9Y4G6 2542 aa11.67□□□□□ -0.54
ARHGEF40-203ENST00000554514 ZNF815PA8K554 130 aa11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 PPP1R17O96001 155 aa11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 TSHBP01222 138 aa11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 KIR2DL4Q99706 377 aa11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 NXPH4O95158 308 aa11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 C12orf74Q32Q52 190 aa11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 MYO9AB2RTY4 2548 aa11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 IGHV3-16A0A0C4DH30 117 aa11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 LGALS1P09382 135 aaKnown RBP11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 GATA3P23771 443 aa11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 C18orf65Q6ZTR6 163 aa11.66□□□□□ -0.54
ARHGEF40-203ENST00000554514 C11orf86A6NJI1 115 aa11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 CRYGDP07320 174 aa11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 HOXD3P31249 432 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 RPL24P83731 157 aaKnown RBP11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 MTURNQ8N3F0 131 aa11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 OR5A1Q8NGJ0 315 aa11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 PLEKHB2Q96CS7 222 aa11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 NAV2Q8IVL1 2488 aa11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 ZNF479Q96JC4 524 aa11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 DUX3Q96PT4 197 aa11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 OPRPNQ99935 248 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF40-203ENST00000554514 IGHV3-73A0A0B4J1V6 119 aa11.64□□□□□ -0.55
ARHGEF40-203ENST00000554514 IGLL5B9A064 214 aa11.64□□□□□ -0.55
ARHGEF40-203ENST00000554514 K7EQG2 157 aa11.64□□□□□ -0.55
ARHGEF40-203ENST00000554514 PRM2P04554 102 aa11.64□□□□□ -0.55
ARHGEF40-203ENST00000554514 VCYO14598 125 aa11.64□□□□□ -0.55
ARHGEF40-203ENST00000554514 HOXA3O43365 443 aaPredicted RBP11.64□□□□□ -0.55
ARHGEF40-203ENST00000554514 POLR2KP53803 58 aaKnown RBP11.64□□□□□ -0.55
ARHGEF40-203ENST00000554514 DSCR9P59020 149 aa11.64□□□□□ -0.55
ARHGEF40-203ENST00000554514 AMTNQ6UX39 209 aa11.64□□□□□ -0.55
ARHGEF40-203ENST00000554514 TEX15Q9BXT5 2789 aa11.64□□□□□ -0.55
ARHGEF40-203ENST00000554514 KNCNA6PVL3 124 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 KHDC1LQ5JSQ8 128 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 TMEM170BQ5T4T1 132 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 SFTA2Q6UW10 78 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 SHISA2Q6UWI4 295 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 TRBV7-3A0A075B6L6 115 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 IGHV1OR15-1A0A075B7D0 117 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 E9PLD3 99 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 SLURP1P55000 103 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 SRSF9Q13242 221 aaKnown RBP eCLIP11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 ZNF876PQ49A33 203 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 SYT8Q8NBV8 401 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 VPREB3Q9UKI3 123 aa11.63□□□□□ -0.55
ARHGEF40-203ENST00000554514 POM121L12Q8N7R1 296 aa11.62□□□□□ -0.55
ARHGEF40-203ENST00000554514 IGLV4-69A0A075B6H9 119 aa11.62□□□□□ -0.55
ARHGEF40-203ENST00000554514 TCTEX1D4Q5JR98 221 aa11.62□□□□□ -0.55
ARHGEF40-203ENST00000554514 SAMD13Q5VXD3 122 aa11.62□□□□□ -0.55
ARHGEF40-203ENST00000554514 C9orf85Q96MD7 179 aa11.62□□□□□ -0.55
ARHGEF40-203ENST00000554514 IGIPA6NJ69 53 aa11.61□□□□□ -0.55
ARHGEF40-203ENST00000554514 COX6B1P14854 86 aa11.61□□□□□ -0.55
ARHGEF40-203ENST00000554514 PMVKQ15126 192 aa11.61□□□□□ -0.55
ARHGEF40-203ENST00000554514 H3BMG7 143 aa11.61□□□□□ -0.55
ARHGEF40-203ENST00000554514 KRTAP10-9P60411 292 aa11.61□□□□□ -0.55
ARHGEF40-203ENST00000554514 TAL2Q16559 108 aa11.61□□□□□ -0.55
ARHGEF40-203ENST00000554514 MORN3Q6PF18 240 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF40-203ENST00000554514 ZNF702PQ9H963 129 aa11.61□□□□□ -0.55
ARHGEF40-203ENST00000554514 SONP18583 2426 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-203ENST00000554514 A0A096LNT2 108 aa11.6□□□□□ -0.55
ARHGEF40-203ENST00000554514 IGHV3-64A0A075B6Q5 118 aa11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 M0QY20 66 aa11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 LGALS9O00182 355 aa11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 ZNF580Q9UK33 172 aa11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 USP24Q9UPU5 2620 aa11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 A0A1B0GV72 72 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms