RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 SLC25A16P16260 332 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 PLNP26678 52 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 ZNF672Q499Z4 452 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-207ENST00000554439 TCTEX1D4Q5JR98 221 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 TMEM78Q5T7P6 136 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 SUMO4Q6EEV6 95 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 KRTAP5-4Q6L8H1 288 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 OR11H1Q8NG94 326 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 OR11H2Q8NH07 326 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 FAM57AQ8TBR7 257 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 RASL10AQ92737 203 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 MRAP2Q96G30 205 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 SCGB3A1Q96QR1 104 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 PRADC1Q9BSG0 188 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 RAB1BQ9H0U4 201 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 ZNF292O60281 2723 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 ZFHX2Q9C0A1 2572 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-207ENST00000554439 COL6A6A6NMZ7 2263 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 TRAV8-2A0A0B4J237 113 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 CLPSL1A2RUU4 121 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 TCL1BO95988 128 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 SRSF9Q13242 221 aaKnown RBP eCLIP1.93□□□□□ -2.1
PRPF39-207ENST00000554439 TAL2Q16559 108 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 C15orf32Q32M92 178 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 PRR30Q53SZ7 412 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-207ENST00000554439 SCGB1D4Q6XE38 83 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 Q6ZS92 163 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 Q6ZUT4 128 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 C14orf178Q8N769 122 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-207ENST00000554439 NPBQ8NG41 125 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 BAALCQ8WXS3 180 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 SMIM2Q9BVW6 85 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 DPM3Q9P2X0 92 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 SS18L2Q9UHA2 77 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 SORL1Q92673 2214 aa1.93□□□□□ -2.1
PRPF39-207ENST00000554439 SPTAN1Q13813 2472 aaKnown RBP1.93□□□□□ -2.1
PRPF39-207ENST00000554439 IGHV7-81A0A0B4J1V7 117 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 GAGE12JA6NER3 117 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 G3V318 75 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 BUB3O43684 328 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 DUSP14O95147 198 aaKnown RBP1.92□□□□□ -2.1
PRPF39-207ENST00000554439 CRYGDP07320 174 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 MGPP08493 103 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 COX6B1P14854 86 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 CRIP2P52943 208 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-207ENST00000554439 TSPEAR-AS2P59090 65 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 ECSCRQ19T08 205 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 C2orf66Q6UXQ4 117 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 CLEC19AQ6UXS0 136 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 LINC01560Q8TB33 94 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 DLX4Q92988 240 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-207ENST00000554439 TOMM6Q96B49 74 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 CEP295Q9C0D2 2601 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 AKAP9Q99996 3911 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 ATRXP46100 2492 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 IGKV3-7A0A075B6H7 116 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 TRAV12-1A0A0B4J245 112 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 C11orf86A6NJI1 115 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 H7C2G1 150 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 GNRH2O43555 120 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 TSHBP01222 138 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 SLPIP03973 132 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 CD7P09564 240 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 CFC1BP0CG36 223 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 CFC1P0CG37 223 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 UBE2D1P51668 147 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 UBE2D3P61077 147 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 UBE2D2P62837 147 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 RPL39P62891 51 aaKnown RBP1.92□□□□□ -2.1
PRPF39-207ENST00000554439 PSMG4Q5JS54 123 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 TRPT1Q86TN4 253 aaKnown RBP1.92□□□□□ -2.1
PRPF39-207ENST00000554439 ANKRD29Q8N6D5 301 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 RNF5Q99942 180 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 Q9H8V8 135 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 JPT2Q9H910 190 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 HIF1ANQ9NWT6 349 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 LINC00527Q9UJ94 153 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 CELSR2Q9HCU4 2923 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 IGLV4-69A0A075B6H9 119 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 IGHV3-64A0A075B6Q5 118 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 F6UB75 175 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 PRTN3P24158 256 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 SEC61BP60468 96 aaKnown RBP1.92□□□□□ -2.1
PRPF39-207ENST00000554439 IGFL3Q6UXB1 125 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 PIP4P1Q86T03 277 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 NDUFA11Q86Y39 141 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 GPHB5Q86YW7 130 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 DEFB123Q8N688 67 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 LY6G5BQ8NDX9 201 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 OR11H6Q8NGC7 330 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 ZNF48Q96MX3 618 aaPredicted RBP1.92□□□□□ -2.1
PRPF39-207ENST00000554439 ERG28Q9UKR5 140 aa1.92□□□□□ -2.1
PRPF39-207ENST00000554439 TRBV20-1A0A075B6N2 111 aa1.91□□□□□ -2.1
PRPF39-207ENST00000554439 A0A0J9YY99 117 aa1.91□□□□□ -2.1
PRPF39-207ENST00000554439 RBAKDNA6NC62 111 aa1.91□□□□□ -2.1
PRPF39-207ENST00000554439 ODF3BA8MYP8 253 aa1.91□□□□□ -2.1
PRPF39-207ENST00000554439 ATP6V0E1O15342 81 aa1.91□□□□□ -2.1
PRPF39-207ENST00000554439 CRLF1O75462 422 aa1.91□□□□□ -2.1
PRPF39-207ENST00000554439 SCGB1C2P0DMR2 95 aa1.91□□□□□ -2.1
PRPF39-207ENST00000554439 S100A4P26447 101 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms