RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 MSRB1Q9NZV6 116 aa4.51□□□□□ -1.69
VPS33B-203ENST00000554264 TGP01266 2768 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 A0A1B0GV72 72 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 E9PLD3 99 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 M0R381 172 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 TIMM23O14925 209 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 NCR2O95944 276 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 NPYP01303 97 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 PRSS1P07477 247 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 COL8A2P25067 703 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 LEPP41159 167 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 LAGE3Q14657 143 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 SAMD13Q5VXD3 122 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 CEND1Q8N111 149 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 Q8N9P0 234 aaPredicted RBP4.5□□□□□ -1.69
VPS33B-203ENST00000554264 C20orf78Q9BR46 151 aa4.5□□□□□ -1.69
VPS33B-203ENST00000554264 TIMM8BQ9Y5J9 83 aaPredicted RBP4.5□□□□□ -1.69
VPS33B-203ENST00000554264 TRBV25-1A0A075B6N4 114 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 A0A087WX48 190 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 IGHV3-72A0A0B4J1Y9 119 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 LOC389332A0A1B0GUA5 103 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 A0A1B0GWB2 263 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 TMEM213A2RRL7 107 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 ODF3BA8MYP8 253 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 F8VRH5 84 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.49□□□□□ -1.69
VPS33B-203ENST00000554264 H3BTX0 84 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 H7C1H1 209 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 ORM1P02763 201 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 TCTAP57738 103 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 KRTAP10-11P60412 298 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 RPL32P62910 135 aaKnown RBP4.49□□□□□ -1.69
VPS33B-203ENST00000554264 TMEM78Q5T7P6 136 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 Q8N6K4 173 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 FAM110DQ8TAY7 271 aaPredicted RBP4.49□□□□□ -1.69
VPS33B-203ENST00000554264 SIGMAR1Q99720 223 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 HHLA3Q9XRX5 114 aa4.49□□□□□ -1.69
VPS33B-203ENST00000554264 TRBV7-1A0A0A6YYK4 115 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 IGHV1-69DA0A0B4J2H0 117 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 CENPVL3A0A0U1RRI6 287 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 A0A1W2PRD5 423 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 A0A1W2PRF3 423 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 A0A1W2PRM7 423 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 OR11H12B2RN74 326 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 M0R3E3 92 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 SNAI2O43623 268 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 FAM106CPP0CH98 169 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 COX7A1P24310 79 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 CD24P25063 80 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 CNTFRP26992 372 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 ODF3L2Q3SX64 289 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 PIK3CD-AS1Q5SR53 167 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 C9orf47Q6ZRZ4 202 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 C9orf139Q6ZV77 190 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 OR11H1Q8NG94 326 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 OR11H2Q8NH07 326 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 RNF185Q96GF1 192 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 ZNF479Q96JC4 524 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 ONECUT1Q9UBC0 465 aa4.48□□□□□ -1.69
VPS33B-203ENST00000554264 IGLV2-18A0A075B6J9 118 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 TRBV20-1A0A075B6N2 111 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 IGKV2-40A0A087WW87 121 aaPredicted RBP4.47□□□□□ -1.69
VPS33B-203ENST00000554264 IGHV3-21A0A0B4J1V1 117 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 IGLL5B9A064 214 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 BRI3O95415 125 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 IGKV2D-40P01614 121 aaPredicted RBP4.47□□□□□ -1.69
VPS33B-203ENST00000554264 IGKV2-30P06310 120 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 CTSGP08311 255 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 HERVK_113P61574 105 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 RRN3P1Q2M238 152 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 TCTEX1D4Q5JR98 221 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 ZC2HC1BQ5TFG8 222 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 RUSC1-AS1Q66K80 236 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 PCP2Q8IVA1 136 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 PHLDA1Q8WV24 401 aaPredicted RBP4.47□□□□□ -1.69
VPS33B-203ENST00000554264 EEF1AKMT3Q96AZ1 226 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 LINC00477Q96M19 166 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 C17orf77Q96MU5 243 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 DUX5Q96PT3 197 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 METTL26Q96S19 204 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 SMIM2Q9BVW6 85 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 SPANXA1Q9NS26 97 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 HILPDAQ9Y5L2 63 aa4.47□□□□□ -1.69
VPS33B-203ENST00000554264 TMSB15BA0A087X1C1 80 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 TRAV21A0A0B4J279 112 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 MYMXA0A1B0GTQ4 84 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 FAM223BA6NKX1 122 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 H3BMG7 143 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 M0QXV9 152 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 OVOL1O14753 267 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 BUB3O43684 328 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 SAP30O75446 220 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 TMEM11P17152 192 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 RPL24P83731 157 aaKnown RBP4.46□□□□□ -1.7
VPS33B-203ENST00000554264 HES1Q14469 280 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 C12orf74Q32Q52 190 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 FAM106AQ4KMX7 169 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 DGAT2L7PQ6IED9 249 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 FAM223AQ8IWN6 122 aa4.46□□□□□ -1.7
VPS33B-203ENST00000554264 RAB37Q96AX2 223 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms