RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 MED14OSP0DP75 135 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 NTF3P20783 257 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 CTRLP40313 264 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 CAMPP49913 170 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 LYZP61626 148 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 GNG5P63218 68 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 GDF5OSQ5U4N7 250 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 PET117Q6UWS5 81 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 TMEM70Q9BUB7 260 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 AAMDCQ9H7C9 122 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 HSPB8Q9UJY1 196 aa6.35□□□□□ -1.39
TDP1-208ENST00000553989 HECTD4Q9Y4D8 3996 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 IGLV2-18A0A075B6J9 118 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 A0A1B0GUT8 65 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 H3BRN7 92 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 CRXO43186 299 aaPredicted RBP6.34□□□□□ -1.39
TDP1-208ENST00000553989 IGKV3-20P01619 116 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 SPART-AS1P0CW21 52 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 CT45A10P0DMU9 189 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 RPL7P18124 248 aaKnown RBP6.34□□□□□ -1.39
TDP1-208ENST00000553989 FXYD7P58549 80 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 TDRG1Q3Y452 100 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 SIGLEC15Q6ZMC9 328 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 COX8CQ7Z4L0 72 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 CSNK1G2-AS1Q8NCQ2 148 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 OR2D3Q8NGH3 330 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 GLMPQ8WWB7 406 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 PGLYRP4Q96LB8 373 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 PSG8Q9UQ74 426 aa6.34□□□□□ -1.39
TDP1-208ENST00000553989 DNAH10Q8IVF4 4471 aa6.34□□□□□ -1.4
TDP1-208ENST00000553989 PCLOQ9Y6V0 5065 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 A0A1B0GVY2 172 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 TMEM189A5PLL7 270 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 HSBP1L1C9JCN9 74 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 H3BMM0 161 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 IGLV2-11P01706 119 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 HTN3P15516 51 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 ZNF25P17030 456 aaPredicted RBP6.33□□□□□ -1.4
TDP1-208ENST00000553989 HNRNPA3P51991 378 aaKnown RBP6.33□□□□□ -1.4
TDP1-208ENST00000553989 PSG3Q16557 428 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 RNASEKQ6P5S7 137 aaKnown RBP6.33□□□□□ -1.4
TDP1-208ENST00000553989 Q6ZN92 141 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 GOLT1AQ6ZVE7 132 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 PRNTQ86SH4 94 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 Q86TA4 180 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 FAM19A2Q8N3H0 131 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 GTSF1Q8WW33 167 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 RNF125Q96EQ8 232 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 MAP1LC3CQ9BXW4 147 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 TMEM191AQ9H0A3 160 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 ST20Q9HBF5 79 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 KIAA1109Q2LD37 5005 aa6.33□□□□□ -1.4
TDP1-208ENST00000553989 RTL8CO15255 209 aa6.32□□□□□ -1.4
TDP1-208ENST00000553989 LEPROTL1O95214 131 aa6.32□□□□□ -1.4
TDP1-208ENST00000553989 HLA-DRB4P13762 266 aa6.32□□□□□ -1.4
TDP1-208ENST00000553989 ZNF493Q6ZR52 646 aa6.32□□□□□ -1.4
TDP1-208ENST00000553989 PMCHL2Q9BQD1 86 aa6.32□□□□□ -1.4
TDP1-208ENST00000553989 RPH3ALQ9UNE2 315 aa6.32□□□□□ -1.4
TDP1-208ENST00000553989 LAMTOR2Q9Y2Q5 125 aa6.32□□□□□ -1.4
TDP1-208ENST00000553989 GOLT1BQ9Y3E0 138 aa6.32□□□□□ -1.4
TDP1-208ENST00000553989 HLA-DRB4X5D2U9 266 aa6.32□□□□□ -1.4
TDP1-208ENST00000553989 TEX48A0A1B0GUV7 120 aa6.31□□□□□ -1.4
TDP1-208ENST00000553989 SMIM9A6NGZ8 99 aa6.31□□□□□ -1.4
TDP1-208ENST00000553989 MRPS12O15235 138 aaKnown RBP6.31□□□□□ -1.4
TDP1-208ENST00000553989 DLEU1O43261 78 aa6.31□□□□□ -1.4
TDP1-208ENST00000553989 BUB3O43684 328 aa6.31□□□□□ -1.4
TDP1-208ENST00000553989 ID1P41134 155 aa6.31□□□□□ -1.4
TDP1-208ENST00000553989 LGALS9BQ3B8N2 356 aa6.31□□□□□ -1.4
TDP1-208ENST00000553989 FAM222AQ5U5X8 452 aa6.31□□□□□ -1.4
TDP1-208ENST00000553989 EBLN2Q6P2I7 272 aa6.31□□□□□ -1.4
TDP1-208ENST00000553989 SPATA12Q7Z6I5 190 aa6.31□□□□□ -1.4
TDP1-208ENST00000553989 ORAOV1Q8WV07 137 aa6.31□□□□□ -1.4
TDP1-208ENST00000553989 SYS1-DBNDD2H3BUS1 97 aa6.3□□□□□ -1.4
TDP1-208ENST00000553989 TSPOP30536 169 aa6.3□□□□□ -1.4
TDP1-208ENST00000553989 DEFB1P60022 68 aa6.3□□□□□ -1.4
TDP1-208ENST00000553989 FOXI2Q6ZQN5 318 aa6.3□□□□□ -1.4
TDP1-208ENST00000553989 EXOC3-AS1Q8N2X6 119 aa6.3□□□□□ -1.4
TDP1-208ENST00000553989 PRSS3P2Q8NHM4 247 aa6.3□□□□□ -1.4
TDP1-208ENST00000553989 SGK494Q96LW2 274 aa6.3□□□□□ -1.4
TDP1-208ENST00000553989 TMEM208Q9BTX3 173 aa6.3□□□□□ -1.4
TDP1-208ENST00000553989 DAD1P61803 113 aa6.29□□□□□ -1.4
TDP1-208ENST00000553989 C1orf134Q5TEV5 83 aa6.29□□□□□ -1.4
TDP1-208ENST00000553989 FA2HQ7L5A8 372 aa6.29□□□□□ -1.4
TDP1-208ENST00000553989 ZNF575Q86XF7 245 aa6.29□□□□□ -1.4
TDP1-208ENST00000553989 PPP1R14DQ9NXH3 145 aa6.29□□□□□ -1.4
TDP1-208ENST00000553989 DKK2Q9UBU2 259 aa6.29□□□□□ -1.4
TDP1-208ENST00000553989 VPS13DQ5THJ4 4388 aa6.29□□□□□ -1.4
TDP1-208ENST00000553989 RBAKDNA6NC62 111 aa6.28□□□□□ -1.4
TDP1-208ENST00000553989 FABP5P3A8MUU1 101 aa6.28□□□□□ -1.4
TDP1-208ENST00000553989 H3BTX0 84 aa6.28□□□□□ -1.4
TDP1-208ENST00000553989 PPBPP02775 128 aa6.28□□□□□ -1.4
TDP1-208ENST00000553989 RRN3P1Q2M238 152 aa6.28□□□□□ -1.4
TDP1-208ENST00000553989 OR10AG1Q8NH19 301 aa6.28□□□□□ -1.4
TDP1-208ENST00000553989 ZC2HC1AQ96GY0 325 aa6.28□□□□□ -1.4
TDP1-208ENST00000553989 URB1-AS1Q96HZ7 61 aa6.28□□□□□ -1.4
TDP1-208ENST00000553989 DNAH6Q9C0G6 4158 aa6.28□□□□□ -1.4
TDP1-208ENST00000553989 TRAV8-1A0A0A6YYK1 113 aa6.27□□□□□ -1.41
TDP1-208ENST00000553989 IGHV1-24A0A0C4DH33 117 aa6.27□□□□□ -1.41
TDP1-208ENST00000553989 F6UB75 175 aa6.27□□□□□ -1.41
TDP1-208ENST00000553989 G0S2P27469 103 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms