RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 BLNKQ8WV28 456 aa3.93□□□□□ -1.78
SMARCE1P3-201ENST00000553649 TVP23CQ96ET8 276 aa3.93□□□□□ -1.78
SMARCE1P3-201ENST00000553649 PYGO2Q9BRQ0 406 aa3.93□□□□□ -1.78
SMARCE1P3-201ENST00000553649 SMIM3Q9BZL3 60 aa3.93□□□□□ -1.78
SMARCE1P3-201ENST00000553649 FNDC4Q9H6D8 234 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1P3-201ENST00000553649 AAMDCQ9H7C9 122 aa3.93□□□□□ -1.78
SMARCE1P3-201ENST00000553649 NACAE9PAV3 2078 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 J3KT08 172 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 TAX1BP3O14907 124 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 CXCL1P09341 107 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 CTRLP40313 264 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 OPRK1P41145 380 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 HSPE1P61604 102 aaKnown RBP3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 SNRPD3P62318 126 aaKnown RBP3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 PSG9Q00887 426 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 PMCHL1Q16048 86 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 VWC2Q2TAL6 325 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 SPATA12Q7Z6I5 190 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 ZNF114Q8NC26 417 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 OR5H2Q8NGV7 314 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 OR52I2Q8NH67 350 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 SMIM4Q8WVI0 70 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 SLC25A38Q96DW6 304 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 SGK494Q96LW2 274 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 NIPSNAP3BQ9BS92 247 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 TM2D2Q9BX73 214 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 PPDPFQ9H3Y8 114 aa3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 MRPL36Q9P0J6 103 aaKnown RBP3.92□□□□□ -1.78
SMARCE1P3-201ENST00000553649 A0A0U1RRA0 63 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 FAM90A26D6RGX4 464 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 H3BMM0 161 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 K7EP34 96 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 HYPMO75409 117 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 NDUFB4O95168 129 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 CRYBB3P26998 211 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 H2BFSP57053 126 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 SEC11AP67812 179 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 MRPL23Q16540 153 aaKnown RBP3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 FFAR4Q5NUL3 377 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 GDF5OSQ5U4N7 250 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 SIGLEC15Q6ZMC9 328 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 C6orf223Q8N319 242 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 MBD3L1Q8WWY6 194 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 SEC22AQ96IW7 307 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 WDR61Q9GZS3 305 aaKnown RBP3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 PAM16Q9Y3D7 125 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 YTHDF2Q9Y5A9 579 aaKnown RBP3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 DNAH8Q96JB1 4490 aa3.91□□□□□ -1.78
SMARCE1P3-201ENST00000553649 NBDYA0A0U1RRE5 68 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 IGKV1-39P01597 117 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 IGKV1-17P01599 117 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 HBE1P02100 147 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 IGKV1D-39P04432 117 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 IL4P05112 153 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 CRYGDP07320 174 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 SPINK8P0C7L1 97 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 SEC11BP0C7V7 166 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 RNASE2P10153 161 aaKnown RBP3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 HLA-DRB4P13762 266 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 ORM2P19652 201 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 HRH1P35367 487 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 HINT1P49773 126 aaPredicted RBP3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 SUB1P53999 127 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 TAS2R46P59540 309 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 DAD1P61803 113 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 SSBP1Q04837 148 aaKnown RBP3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 ZNF415Q09FC8 603 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 SPATA45Q537H7 98 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 ZNF709Q8N972 641 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 EIF5A2Q9GZV4 153 aaKnown RBP3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 PARLQ9H300 379 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 MAP1LC3AQ9H492 121 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 ST20Q9HBF5 79 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 HLA-DRB4X5D2U9 266 aa3.9□□□□□ -1.79
SMARCE1P3-201ENST00000553649 TEX48A0A1B0GUV7 120 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 C9JQL5 133 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 F8W1H4 67 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 H3BRM9 83 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 IGKV1-5P01602 117 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 PRM2P04554 102 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 DEFB130BP0DP73 79 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 DEFB130AP0DP74 79 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 SRIP30626 198 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 UBE2NLQ5JXB2 153 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 SPATA31B1PQ5VZV4 182 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 Q6Q795 121 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 FAM159AQ6UWV7 190 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 FAM219AQ8IW50 185 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 TMED6Q8WW62 240 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 S100A16Q96FQ6 103 aaKnown RBP3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 PMCHL2Q9BQD1 86 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 NPVFQ9HCQ7 196 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 NRN1Q9NPD7 142 aa3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 LSM5Q9Y4Y9 91 aaKnown RBP3.89□□□□□ -1.79
SMARCE1P3-201ENST00000553649 TINCRA0A1B0GVN0 87 aa3.88□□□□□ -1.79
SMARCE1P3-201ENST00000553649 DUXBA0A1W2PPF3 345 aa3.88□□□□□ -1.79
SMARCE1P3-201ENST00000553649 F6UB75 175 aa3.88□□□□□ -1.79
SMARCE1P3-201ENST00000553649 TMEM250H0YL14 139 aa3.88□□□□□ -1.79
SMARCE1P3-201ENST00000553649 SFT2D2O95562 160 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms