RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 C10orf126Q8N4M7 172 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 C14orf178Q8N769 122 aaPredicted RBP3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 LINC00482Q8N8I6 264 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 SYT8Q8NBV8 401 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 DCANP1Q8TF63 244 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 PPDPFLQ8WWR9 84 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 RPL39LQ96EH5 51 aaKnown RBP3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 AMELXQ99217 191 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 MDFICQ9P1T7 246 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 TP53TG1Q9Y2A0 90 aa3.93□□□□□ -1.78
TMEM55B-204ENST00000553602 FRYQ5TBA9 3013 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV3OR16-13A0A075B7E8 117 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV3-49A0A0A0MS15 119 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV3-74A0A0B4J1X5 117 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 LEPROTO15243 131 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 DUSP14O95147 198 aaKnown RBP3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 APOMO95445 188 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV3-30P01768 117 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 P0DMU3 169 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 FAM231AP0DMU4 169 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 FAM231CP0DMU5 169 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV3-30-5P0DP03 117 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 FOXI1Q12951 378 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 SRSF9Q13242 221 aaKnown RBP eCLIP3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 CLEC2AQ6UVW9 174 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 Q6ZQT7 251 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 TRPT1Q86TN4 253 aaKnown RBP3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 PTH2Q96A98 100 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 PLEKHB2Q96CS7 222 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 RNF183Q96D59 192 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 RHPN1-AS1Q9BWJ2 59 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 PYGO1Q9Y3Y4 419 aa3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 RP1L1Q8IWN7 2480 aaPredicted RBP3.92□□□□□ -1.78
TMEM55B-204ENST00000553602 TRGV11A0A075B6L2 103 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV3-16A0A0C4DH30 117 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 TMEM223A0PJW6 202 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 A8MTW9 85 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 TMEM262E9PQX1 116 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 J3QQQ9 107 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 M0QY20 66 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 TRBV12-3P01733 135 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 IGHV4-39P01824 125 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 GATA3P23771 443 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 Q5PR19 223 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 AMTNQ6UX39 209 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 SH2D6Q7Z4S9 175 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 TMEM219Q86XT9 240 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 PIMREGQ9BSJ6 248 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 KLK15Q9H2R5 256 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 UBTD1Q9HAC8 227 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 PRO1854Q9UHT4 67 aa3.91□□□□□ -1.78
TMEM55B-204ENST00000553602 SPTA1P02549 2419 aa3.9□□□□□ -1.78
TMEM55B-204ENST00000553602 TRAV2A0A0B4J234 112 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 A8MWV9 139 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 K7EQG2 157 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 GNRH2O43555 120 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 CFC1BP0CG36 223 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 CFC1P0CG37 223 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 LGALS3P17931 250 aaKnown RBP3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 PSMB8P28062 276 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 TSPEAR-AS2P59090 65 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 SNRPD3P62318 126 aaKnown RBP3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 SMAGPQ0VAQ4 97 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 C20orf203Q8NBC4 194 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 C10orf105Q8TEF2 133 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 ZNF418Q8TF45 676 aaPredicted RBP3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 GTSF1LQ9H1H1 148 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 FASNP49327 2511 aaKnown RBP3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 DSPP15924 2871 aaKnown RBP3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 NBEAQ8NFP9 2946 aa3.9□□□□□ -1.79
TMEM55B-204ENST00000553602 ZFYVE26Q68DK2 2539 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 IGHV1OR15-1A0A075B7D0 117 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 F6UB75 175 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 H3BUX3 64 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 I3L3M4 83 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 M0R2P5 195 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 RHODO00212 210 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 TIMM17BO60830 172 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 IGHV3-33P01772 117 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 MSMBP08118 114 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 GYPEP15421 78 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 ZNF22P17026 224 aaPredicted RBP3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 RPL13AP40429 203 aaKnown RBP3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 DSCR9P59020 149 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 MRPS36P82909 103 aaKnown RBP3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 Q6ZUT4 128 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 ZNRF2Q8NHG8 242 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 LINC00467Q9BRT7 94 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 SPANXDQ9BXN6 97 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 PPDPFQ9H3Y8 114 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 SPANXA1Q9NS26 97 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 SPANXCQ9NY87 97 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 PCNX1Q96RV3 2341 aa3.89□□□□□ -1.79
TMEM55B-204ENST00000553602 CELSR3Q9NYQ7 3312 aa3.88□□□□□ -1.79
TMEM55B-204ENST00000553602 ATRXP46100 2492 aa3.88□□□□□ -1.79
TMEM55B-204ENST00000553602 IGLV4-3A0A075B6K6 122 aa3.88□□□□□ -1.79
TMEM55B-204ENST00000553602 IGHV4-61A0A0C4DH41 118 aa3.88□□□□□ -1.79
TMEM55B-204ENST00000553602 LOC107984156A0A0G2JMH3 177 aa3.88□□□□□ -1.79
TMEM55B-204ENST00000553602 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms