RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 SYT8Q8NBV8 401 aa7.98□□□□□ -1.13
SRP54-203ENST00000553544 ZC2HC1AQ96GY0 325 aa7.98□□□□□ -1.13
SRP54-203ENST00000553544 LOC100131303A0A0U1RQF7 123 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 KRTAP29-1A8MX34 341 aaPredicted RBP7.97□□□□□ -1.13
SRP54-203ENST00000553544 SH2D1AO60880 128 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 CXCL1P09341 107 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 GNG4P50150 75 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 CCL20P78556 96 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 LINC01559Q495D7 138 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 ZNF506Q5JVG8 444 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 SLC25A29Q8N8R3 303 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 PCNPQ8WW12 178 aaKnown RBP7.97□□□□□ -1.13
SRP54-203ENST00000553544 TMEM70Q9BUB7 260 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 MED9Q9NWA0 146 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 IL36BQ9NZH7 164 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 MSRB1Q9NZV6 116 aa7.97□□□□□ -1.13
SRP54-203ENST00000553544 TRBV6-4A0A1B0GX49 114 aa7.96□□□□□ -1.14
SRP54-203ENST00000553544 XKRY2A2RUG3 117 aa7.96□□□□□ -1.14
SRP54-203ENST00000553544 TMEM250H0YL14 139 aa7.96□□□□□ -1.14
SRP54-203ENST00000553544 TIRAPP58753 221 aa7.96□□□□□ -1.14
SRP54-203ENST00000553544 HAMPP81172 84 aa7.96□□□□□ -1.14
SRP54-203ENST00000553544 DNLZQ5SXM8 178 aa7.96□□□□□ -1.14
SRP54-203ENST00000553544 SH2D6Q7Z4S9 175 aa7.96□□□□□ -1.14
SRP54-203ENST00000553544 LYPD6BQ8NI32 183 aa7.96□□□□□ -1.14
SRP54-203ENST00000553544 DAZAP1Q96EP5 407 aaKnown RBP7.96□□□□□ -1.14
SRP54-203ENST00000553544 LY96Q9Y6Y9 160 aa7.96□□□□□ -1.14
SRP54-203ENST00000553544 IGLV5-52A0A0A0MRZ9 124 aa7.95□□□□□ -1.14
SRP54-203ENST00000553544 RBFOX3A6NFN3 312 aa7.95□□□□□ -1.14
SRP54-203ENST00000553544 A8MWV9 139 aa7.95□□□□□ -1.14
SRP54-203ENST00000553544 PLA2G1BP04054 148 aaKnown RBP7.95□□□□□ -1.14
SRP54-203ENST00000553544 EVI2AP22794 236 aa7.95□□□□□ -1.14
SRP54-203ENST00000553544 CENPWQ5EE01 88 aa7.95□□□□□ -1.14
SRP54-203ENST00000553544 WFDC10BQ8IUB3 73 aa7.95□□□□□ -1.14
SRP54-203ENST00000553544 PHLDA3Q9Y5J5 127 aa7.95□□□□□ -1.14
SRP54-203ENST00000553544 KRBOX1C9JBD0 128 aa7.94□□□□□ -1.14
SRP54-203ENST00000553544 M0R036 132 aa7.94□□□□□ -1.14
SRP54-203ENST00000553544 RHODO00212 210 aa7.94□□□□□ -1.14
SRP54-203ENST00000553544 MGST1P10620 155 aaKnown RBP7.94□□□□□ -1.14
SRP54-203ENST00000553544 RPS20P60866 119 aaKnown RBP7.94□□□□□ -1.14
SRP54-203ENST00000553544 RHOHQ15669 191 aa7.94□□□□□ -1.14
SRP54-203ENST00000553544 PRR27Q6MZM9 219 aa7.94□□□□□ -1.14
SRP54-203ENST00000553544 TEX261Q6UWH6 196 aa7.94□□□□□ -1.14
SRP54-203ENST00000553544 ZFP82Q8N141 532 aa7.94□□□□□ -1.14
SRP54-203ENST00000553544 NHLRC2Q8NBF2 726 aa7.94□□□□□ -1.14
SRP54-203ENST00000553544 DEFB104AQ8WTQ1 72 aa7.94□□□□□ -1.14
SRP54-203ENST00000553544 MLST8Q9BVC4 326 aa7.94□□□□□ -1.14
SRP54-203ENST00000553544 EIF5A2Q9GZV4 153 aaKnown RBP7.94□□□□□ -1.14
SRP54-203ENST00000553544 IGHV3-73A0A0B4J1V6 119 aa7.93□□□□□ -1.14
SRP54-203ENST00000553544 H3BVH4 76 aa7.93□□□□□ -1.14
SRP54-203ENST00000553544 UFSP1Q6NVU6 142 aa7.93□□□□□ -1.14
SRP54-203ENST00000553544 ZFP2Q6ZN57 461 aa7.93□□□□□ -1.14
SRP54-203ENST00000553544 NTN5Q8WTR8 489 aaPredicted RBP7.93□□□□□ -1.14
SRP54-203ENST00000553544 PRADC1Q9BSG0 188 aa7.93□□□□□ -1.14
SRP54-203ENST00000553544 PARLQ9H300 379 aa7.93□□□□□ -1.14
SRP54-203ENST00000553544 PSCAO43653 123 aa7.92□□□□□ -1.14
SRP54-203ENST00000553544 P01737 135 aa7.92□□□□□ -1.14
SRP54-203ENST00000553544 ARMS2P0C7Q2 107 aa7.92□□□□□ -1.14
SRP54-203ENST00000553544 RAB14P61106 215 aa7.92□□□□□ -1.14
SRP54-203ENST00000553544 TOR2AQ5JU69 321 aa7.92□□□□□ -1.14
SRP54-203ENST00000553544 FAM210AQ96ND0 272 aa7.92□□□□□ -1.14
SRP54-203ENST00000553544 SMDT1Q9H4I9 107 aa7.92□□□□□ -1.14
SRP54-203ENST00000553544 UBR4Q5T4S7 5183 aa7.92□□□□□ -1.14
SRP54-203ENST00000553544 GRIFINA4D1Z8 144 aa7.91□□□□□ -1.14
SRP54-203ENST00000553544 DERL1Q9BUN8 251 aa7.91□□□□□ -1.14
SRP54-203ENST00000553544 SAMD10Q9BYL1 202 aa7.91□□□□□ -1.14
SRP54-203ENST00000553544 JPT2Q9H910 190 aa7.91□□□□□ -1.14
SRP54-203ENST00000553544 TMSB15BA0A087X1C1 80 aa7.9□□□□□ -1.14
SRP54-203ENST00000553544 IGHV3-38A0A0C4DH36 116 aa7.9□□□□□ -1.14
SRP54-203ENST00000553544 CRYGDP07320 174 aa7.9□□□□□ -1.14
SRP54-203ENST00000553544 OR5AL1P0C617 328 aa7.9□□□□□ -1.14
SRP54-203ENST00000553544 LINC00694P0DN24 101 aa7.9□□□□□ -1.14
SRP54-203ENST00000553544 LINC01556Q5JQF7 62 aa7.9□□□□□ -1.14
SRP54-203ENST00000553544 C10orf126Q8N4M7 172 aa7.9□□□□□ -1.14
SRP54-203ENST00000553544 GTSF1LQ9H1H1 148 aa7.9□□□□□ -1.14
SRP54-203ENST00000553544 FAM30AQ9NZY2 134 aa7.9□□□□□ -1.14
SRP54-203ENST00000553544 Q9UF83 564 aa7.9□□□□□ -1.14
SRP54-203ENST00000553544 LRCOL1A6NCL2 159 aa7.89□□□□□ -1.15
SRP54-203ENST00000553544 PEA15Q15121 130 aa7.89□□□□□ -1.15
SRP54-203ENST00000553544 FAM74A3Q4VXF1 159 aa7.89□□□□□ -1.15
SRP54-203ENST00000553544 LELP1Q5T871 98 aa7.89□□□□□ -1.15
SRP54-203ENST00000553544 SPANXN1Q5VSR9 72 aa7.89□□□□□ -1.15
SRP54-203ENST00000553544 ATP6V0E2Q8NHE4 81 aa7.89□□□□□ -1.15
SRP54-203ENST00000553544 SFRP2Q96HF1 295 aa7.89□□□□□ -1.15
SRP54-203ENST00000553544 SMIM7Q9BQ49 75 aa7.89□□□□□ -1.15
SRP54-203ENST00000553544 DNAH8Q96JB1 4490 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 TRAV8-6A0A0B4J262 113 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 RAB19A4D1S5 217 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 F2Z2F3 143 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 M0R381 172 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 SNAI2O43623 268 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 SMIM17P0DL12 118 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 CEBPGP53567 150 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 CACNG7P62955 275 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 C14orf178Q8N769 122 aaPredicted RBP7.88□□□□□ -1.15
SRP54-203ENST00000553544 OR2D3Q8NGH3 330 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 AP1S3Q96PC3 154 aa7.88□□□□□ -1.15
SRP54-203ENST00000553544 GAGE12JA6NER3 117 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 ZNF727A8MUV8 499 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 IBA57-AS1B1ANH7 110 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 GAGE1Q13065 139 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms