RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TRBV6-5A0A0K0K1A5 114 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 CRLF1O75462 422 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 NCR2O95944 276 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 IGLV1-51P01701 117 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 INSL3P51460 131 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 SUMO2P61956 95 aaKnown RBP5.38□□□□□ -1.55
ATXN3-221ENST00000553498 ZNF415Q09FC8 603 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 LAGE3Q14657 143 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 LGALS9BQ3B8N2 356 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 LGALS9CQ6DKI2 356 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 STHQ8IWL8 128 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 C14orf178Q8N769 122 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-221ENST00000553498 DUX3Q96PT4 197 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 ST20Q9HBF5 79 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 KIF25-AS1Q9Y6Z4 181 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 POLQO75417 2590 aa5.38□□□□□ -1.55
ATXN3-221ENST00000553498 WNK2Q9Y3S1 2297 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 A0A096LNJ9 63 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 A0A1W2PRX2 142 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 CBY3A6NI87 242 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 KNCNA6PVL3 124 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 A8MWV9 139 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 SMKR1H3BMG3 65 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 H7C1H1 209 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 IGKV3-20P01619 116 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 BEAN1Q3B7T3 259 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 SPATA45Q537H7 98 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 MORN3Q6PF18 240 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-221ENST00000553498 ZNF705AQ6ZN79 300 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-221ENST00000553498 Q6ZQT7 251 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 TRPT1Q86TN4 253 aaKnown RBP5.37□□□□□ -1.55
ATXN3-221ENST00000553498 IFI27L1Q96BM0 104 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 SMIM2Q9BVW6 85 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 C1QTNF4Q9BXJ3 329 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 PRO1933Q9H354 126 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 UQCR10Q9UDW1 63 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 TIMM8BQ9Y5J9 83 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-221ENST00000553498 ANK3Q12955 4377 aaKnown RBP5.37□□□□□ -1.55
ATXN3-221ENST00000553498 CSMD1Q96PZ7 3565 aa5.37□□□□□ -1.55
ATXN3-221ENST00000553498 ABCA12Q86UK0 2595 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 TRAV12-2A0A075B6T6 113 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 M0R2P5 195 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 RHODO00212 210 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 VCYO14598 125 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 SAP30O75446 220 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 LINC00315P59091 139 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 ODF3L2Q3SX64 289 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 C11orf44Q8N8P7 122 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 RASL10AQ92737 203 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 SMR3AQ99954 134 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 PAM16Q9Y3D7 125 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 AKAP9Q99996 3911 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 ABCA1O95477 2261 aa5.36□□□□□ -1.55
ATXN3-221ENST00000553498 INAFM1C9JVW0 142 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 CIDEAO60543 219 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 MGPP08493 103 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 IGLC3P0DOY3 106 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 CTAG1AP78358 180 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 ZNF876PQ49A33 203 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 C14orf144Q96I85 54 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 KIR2DL4Q99706 377 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 PMCHL2Q9BQD1 86 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 MDFICQ9P1T7 246 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 SELENOKQ9Y6D0 94 aa5.35□□□□□ -1.55
ATXN3-221ENST00000553498 MXRA5Q9NR99 2828 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 TRAV12-1A0A0B4J245 112 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 TRAV26-2A0A0B4J265 109 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 TRBV27A0A0K0K1C4 114 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 RBMY1BA6NDE4 496 aaKnown RBP5.34□□□□□ -1.55
ATXN3-221ENST00000553498 RBMY1EA6NEQ0 496 aaKnown RBP5.34□□□□□ -1.55
ATXN3-221ENST00000553498 NUDT3O95989 172 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 CRYGDP07320 174 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 RBMY1DP0C7P1 496 aaKnown RBP5.34□□□□□ -1.55
ATXN3-221ENST00000553498 POLR2KP53803 58 aaKnown RBP5.34□□□□□ -1.55
ATXN3-221ENST00000553498 NSUN5P1Q3KNT7 163 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 SUMO4Q6EEV6 95 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 ZFP2Q6ZN57 461 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 TMEM158Q8WZ71 300 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 TOMM6Q96B49 74 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 LINC01587Q99440 93 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 MCRIP2Q9BUT9 160 aaKnown RBP5.34□□□□□ -1.55
ATXN3-221ENST00000553498 MRPS16Q9Y3D3 137 aaKnown RBP5.34□□□□□ -1.55
ATXN3-221ENST00000553498 GOLT1BQ9Y3E0 138 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 ITPR3Q14573 2671 aa5.34□□□□□ -1.55
ATXN3-221ENST00000553498 ZANQ9Y493 2812 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 F5H697 171 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-221ENST00000553498 M0QY20 66 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 M0R143 59 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 GAS8-AS1O95177 125 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 PRSS1P07477 247 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 NPSP0C0P6 89 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 RBMY1A1P0DJD3 496 aaKnown RBP5.33□□□□□ -1.56
ATXN3-221ENST00000553498 RBMY1CP0DJD4 496 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 IGLL1P15814 213 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 GATA1P15976 413 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-221ENST00000553498 PLNP26678 52 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 ODF1Q14990 250 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 RBMY1FQ15415 496 aaKnown RBP5.33□□□□□ -1.56
ATXN3-221ENST00000553498 RHOHQ15669 191 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms