RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 TMEM183AQ8IXX5 376 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 SVBPQ8N300 66 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 C16orf74Q96GX8 76 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 TP53TG3Q9ULZ0 132 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 EPDR1Q9UM22 224 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 PSG8Q9UQ74 426 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 STAB2Q8WWQ8 2551 aa3.3□□□□□ -1.88
ATXN3-220ENST00000553491 IGHV1OR15-1A0A075B7D0 117 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 A0A0J9YY99 117 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 A0A0U1RRA0 63 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 TEX48A0A1B0GUV7 120 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 RBAKDNA6NC62 111 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 LYRM9A8MSI8 78 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 A8MTW9 85 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 EPM2AB3EWF7 344 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 UMAD1C9J7I0 102 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 H7C423 109 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 IGHV3-53P01767 116 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 ORM1P02763 201 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 TCRAP04437 139 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 ATP5G1P05496 136 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 ATP5G3P48201 142 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 SSTP61278 116 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 S100A12P80511 92 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 PRR9Q5T870 116 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 ALKAL2Q6UX46 152 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 ZNF493Q6ZR52 646 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 C5orf17Q8NAS9 161 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 TMEM263Q8WUH6 116 aaKnown RBP3.29□□□□□ -1.88
ATXN3-220ENST00000553491 C20orf144Q9BQM9 153 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 PYGO2Q9BRQ0 406 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 NDUFAF3Q9BU61 184 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 GNG13Q9P2W3 67 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 CARHSP1Q9Y2V2 147 aaKnown RBP3.29□□□□□ -1.88
ATXN3-220ENST00000553491 KLF12Q9Y4X4 402 aa3.29□□□□□ -1.88
ATXN3-220ENST00000553491 TMSB15BA0A087X1C1 80 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 TRAV21A0A0B4J279 112 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 LCE6AA0A183 80 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 A0A1W2PRE2 83 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 FAM74A7A6NL05 159 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 KLLNB2CW77 178 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 C9JCJ5 164 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 M0R2N4 97 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 PEX7O00628 323 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 ZNF324O75467 553 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-220ENST00000553491 SNAPINO95295 136 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 GCGP01275 180 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 CRISP2P16562 243 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 S100A4P26447 101 aaKnown RBP3.28□□□□□ -1.88
ATXN3-220ENST00000553491 AKR1C3P42330 323 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 CEBPGP53567 150 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 CCL20P78556 96 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 SAPCD1Q5SSQ6 148 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 DPPA3Q6W0C5 159 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 Q6ZTI0 123 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 ZFAND2AQ8N6M9 145 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 CYB561D1Q8N8Q1 229 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 PCNPQ8WW12 178 aaKnown RBP3.28□□□□□ -1.88
ATXN3-220ENST00000553491 MBD3L1Q8WWY6 194 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 TVP23CQ96ET8 276 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 ODF3Q96PU9 254 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 SEC11CQ9BY50 192 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-220ENST00000553491 GFRA4Q9GZZ7 299 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 SMDT1Q9H4I9 107 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 MRPL16Q9NX20 251 aaKnown RBP3.28□□□□□ -1.88
ATXN3-220ENST00000553491 APLNQ9ULZ1 77 aa3.28□□□□□ -1.88
ATXN3-220ENST00000553491 TRGV4A0A0C4DH28 118 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 SERTM2A0A1B0GWG4 89 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 GRIFINA4D1Z8 144 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 FABP5P3A8MUU1 101 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 GGTLC3B5MD39 225 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 M0R036 132 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 IFNA1P01562 189 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 APOC3P02656 99 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 MGST1P10620 155 aaKnown RBP3.27□□□□□ -1.89
ATXN3-220ENST00000553491 RAB5CP51148 216 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 ZNF80P51504 273 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-220ENST00000553491 NDUFV3P56181 108 aaKnown RBP3.27□□□□□ -1.89
ATXN3-220ENST00000553491 TMEM75Q8N9X5 138 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 HIST1H2BAQ96A08 127 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 KCNS1Q96KK3 526 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 FAM19A4Q96LR4 140 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 LENEPQ9Y5L5 61 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 ARL2-SNX15V9GYD0 113 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
ATXN3-220ENST00000553491 IGLV2-18A0A075B6J9 118 aa3.26□□□□□ -1.89
ATXN3-220ENST00000553491 IGLV4-3A0A075B6K6 122 aa3.26□□□□□ -1.89
ATXN3-220ENST00000553491 TRAV26-1A0A087WT03 109 aa3.26□□□□□ -1.89
ATXN3-220ENST00000553491 A0A096LPF7 62 aa3.26□□□□□ -1.89
ATXN3-220ENST00000553491 IGHV3-73A0A0B4J1V6 119 aa3.26□□□□□ -1.89
ATXN3-220ENST00000553491 IGHV3-16A0A0C4DH30 117 aa3.26□□□□□ -1.89
ATXN3-220ENST00000553491 PLAC8L1A1L4L8 177 aa3.26□□□□□ -1.89
ATXN3-220ENST00000553491 FBLL1A6NHQ2 334 aaKnown RBP3.26□□□□□ -1.89
ATXN3-220ENST00000553491 B4DEV8 164 aa3.26□□□□□ -1.89
ATXN3-220ENST00000553491 SCO1O75880 301 aa3.26□□□□□ -1.89
ATXN3-220ENST00000553491 TYMSP04818 313 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms