RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ARMS2P0C7Q2 107 aa10.72□□□□□ -0.69
CDK4-215ENST00000553237 BLOC1S1P78537 153 aa10.72□□□□□ -0.69
CDK4-215ENST00000553237 DNLZQ5SXM8 178 aa10.72□□□□□ -0.69
CDK4-215ENST00000553237 DMRTA1Q5VZB9 504 aa10.72□□□□□ -0.69
CDK4-215ENST00000553237 C10orf126Q8N4M7 172 aa10.72□□□□□ -0.69
CDK4-215ENST00000553237 ATP6V0E2Q8NHE4 81 aa10.72□□□□□ -0.69
CDK4-215ENST00000553237 SAMD10Q9BYL1 202 aa10.72□□□□□ -0.69
CDK4-215ENST00000553237 MED9Q9NWA0 146 aa10.72□□□□□ -0.69
CDK4-215ENST00000553237 PGPEP1Q9NXJ5 209 aa10.72□□□□□ -0.69
CDK4-215ENST00000553237 DNAH5Q8TE73 4624 aa10.71□□□□□ -0.69
CDK4-215ENST00000553237 GAGE12JA6NER3 117 aa10.71□□□□□ -0.69
CDK4-215ENST00000553237 TAGLN2P37802 199 aaKnown RBP10.71□□□□□ -0.69
CDK4-215ENST00000553237 GAGE1Q13065 139 aa10.71□□□□□ -0.69
CDK4-215ENST00000553237 GAGE4Q13068 117 aa10.71□□□□□ -0.69
CDK4-215ENST00000553237 GAGE5Q13069 117 aa10.71□□□□□ -0.69
CDK4-215ENST00000553237 GAGE13Q4V321 117 aa10.71□□□□□ -0.69
CDK4-215ENST00000553237 CENPWQ5EE01 88 aa10.71□□□□□ -0.69
CDK4-215ENST00000553237 PRR27Q6MZM9 219 aa10.71□□□□□ -0.69
CDK4-215ENST00000553237 GTSF1LQ9H1H1 148 aa10.71□□□□□ -0.69
CDK4-215ENST00000553237 ABCA13Q86UQ4 5058 aa10.71□□□□□ -0.7
CDK4-215ENST00000553237 RAB19A4D1S5 217 aa10.7□□□□□ -0.7
CDK4-215ENST00000553237 IGHV3-30P01768 117 aa10.7□□□□□ -0.7
CDK4-215ENST00000553237 IGHV3-33P01772 117 aa10.7□□□□□ -0.7
CDK4-215ENST00000553237 IGHV3-30-3P0DP02 117 aa10.7□□□□□ -0.7
CDK4-215ENST00000553237 IGHV3-30-5P0DP03 117 aa10.7□□□□□ -0.7
CDK4-215ENST00000553237 RPL19P84098 196 aaKnown RBP10.7□□□□□ -0.7
CDK4-215ENST00000553237 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
CDK4-215ENST00000553237 LELP1Q5T871 98 aa10.7□□□□□ -0.7
CDK4-215ENST00000553237 ZFP2Q6ZN57 461 aa10.7□□□□□ -0.7
CDK4-215ENST00000553237 Q9UF83 564 aa10.7□□□□□ -0.7
CDK4-215ENST00000553237 IGLV2-8P01709 118 aa10.69□□□□□ -0.7
CDK4-215ENST00000553237 PIK3CD-AS1Q5SR53 167 aa10.69□□□□□ -0.7
CDK4-215ENST00000553237 C14orf178Q8N769 122 aaPredicted RBP10.69□□□□□ -0.7
CDK4-215ENST00000553237 SYT8Q8NBV8 401 aa10.69□□□□□ -0.7
CDK4-215ENST00000553237 SCRT2Q9NQ03 307 aa10.69□□□□□ -0.7
CDK4-215ENST00000553237 PHLDA3Q9Y5J5 127 aa10.69□□□□□ -0.7
CDK4-215ENST00000553237 APOBP04114 4563 aaKnown RBP10.68□□□□□ -0.7
CDK4-215ENST00000553237 IBA57-AS1B1ANH7 110 aa10.68□□□□□ -0.7
CDK4-215ENST00000553237 GNG4P50150 75 aa10.68□□□□□ -0.7
CDK4-215ENST00000553237 UFSP1Q6NVU6 142 aa10.68□□□□□ -0.7
CDK4-215ENST00000553237 LYPD6BQ8NI32 183 aa10.68□□□□□ -0.7
CDK4-215ENST00000553237 Q9HAA7 133 aa10.68□□□□□ -0.7
CDK4-215ENST00000553237 A0A087WWL8 130 aa10.67□□□□□ -0.7
CDK4-215ENST00000553237 M0R381 172 aa10.67□□□□□ -0.7
CDK4-215ENST00000553237 PSCAO43653 123 aa10.67□□□□□ -0.7
CDK4-215ENST00000553237 FAM74A4Q5TZK3 123 aa10.67□□□□□ -0.7
CDK4-215ENST00000553237 Q8N1X5 172 aa10.67□□□□□ -0.7
CDK4-215ENST00000553237 TRBV20OR9-2A0A075B6H5 130 aa10.66□□□□□ -0.7
CDK4-215ENST00000553237 RBFOX3A6NFN3 312 aa10.66□□□□□ -0.7
CDK4-215ENST00000553237 CDPF1Q6NVV7 123 aa10.66□□□□□ -0.7
CDK4-215ENST00000553237 Q8N3U1 123 aa10.66□□□□□ -0.7
CDK4-215ENST00000553237 SMIM12Q96EX1 92 aa10.66□□□□□ -0.7
CDK4-215ENST00000553237 CXCL1P09341 107 aa10.65□□□□□ -0.7
CDK4-215ENST00000553237 LINC00694P0DN24 101 aa10.65□□□□□ -0.7
CDK4-215ENST00000553237 ZFP82Q8N141 532 aa10.65□□□□□ -0.7
CDK4-215ENST00000553237 DAZAP1Q96EP5 407 aaKnown RBP10.65□□□□□ -0.7
CDK4-215ENST00000553237 SFRP2Q96HF1 295 aa10.65□□□□□ -0.7
CDK4-215ENST00000553237 RHODO00212 210 aa10.64□□□□□ -0.71
CDK4-215ENST00000553237 KRTAP10-1P60331 282 aa10.64□□□□□ -0.71
CDK4-215ENST00000553237 MUC21A0A0G2JKD1 596 aa10.63□□□□□ -0.71
CDK4-215ENST00000553237 MUC21A0A140T8X8 626 aa10.63□□□□□ -0.71
CDK4-215ENST00000553237 C19orf71A6NCJ1 209 aa10.63□□□□□ -0.71
CDK4-215ENST00000553237 LRCOL1A6NCL2 159 aa10.63□□□□□ -0.71
CDK4-215ENST00000553237 OR2D3Q8NGH3 330 aa10.63□□□□□ -0.71
CDK4-215ENST00000553237 OR10AG1Q8NH19 301 aa10.63□□□□□ -0.71
CDK4-215ENST00000553237 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
CDK4-215ENST00000553237 TMEM250H0YL14 139 aa10.62□□□□□ -0.71
CDK4-215ENST00000553237 SNAI2O43623 268 aa10.62□□□□□ -0.71
CDK4-215ENST00000553237 TOR2AQ5JU69 321 aa10.62□□□□□ -0.71
CDK4-215ENST00000553237 EIF5A2Q9GZV4 153 aaKnown RBP10.62□□□□□ -0.71
CDK4-215ENST00000553237 BIN3Q9NQY0 253 aa10.62□□□□□ -0.71
CDK4-215ENST00000553237 P01737 135 aa10.61□□□□□ -0.71
CDK4-215ENST00000553237 OR5AL1P0C617 328 aa10.61□□□□□ -0.71
CDK4-215ENST00000553237 GZMBP10144 247 aa10.61□□□□□ -0.71
CDK4-215ENST00000553237 GCSHP23434 173 aa10.61□□□□□ -0.71
CDK4-215ENST00000553237 CEBPGP53567 150 aa10.61□□□□□ -0.71
CDK4-215ENST00000553237 XGP55808 180 aa10.61□□□□□ -0.71
CDK4-215ENST00000553237 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
CDK4-215ENST00000553237 SSTP61278 116 aa10.61□□□□□ -0.71
CDK4-215ENST00000553237 TEX261Q6UWH6 196 aa10.61□□□□□ -0.71
CDK4-215ENST00000553237 DAZ4Q86SG3 579 aaKnown RBP10.61□□□□□ -0.71
CDK4-215ENST00000553237 OCC1Q8TAD7 63 aa10.61□□□□□ -0.71
CDK4-215ENST00000553237 FAM210AQ96ND0 272 aa10.61□□□□□ -0.71
CDK4-215ENST00000553237 DAZ3Q9NR90 486 aaKnown RBP10.61□□□□□ -0.71
CDK4-215ENST00000553237 A0A087WWC5 75 aa10.6□□□□□ -0.71
CDK4-215ENST00000553237 SPANXN1Q5VSR9 72 aa10.6□□□□□ -0.71
CDK4-215ENST00000553237 TPPP3Q9BW30 176 aa10.6□□□□□ -0.71
CDK4-215ENST00000553237 IGLV5-52A0A0A0MRZ9 124 aa10.59□□□□□ -0.71
CDK4-215ENST00000553237 K7EN84 100 aa10.59□□□□□ -0.71
CDK4-215ENST00000553237 LAGE3Q14657 143 aa10.59□□□□□ -0.71
CDK4-215ENST00000553237 FER1L6-AS1Q8NA97 138 aa10.59□□□□□ -0.71
CDK4-215ENST00000553237 NUDT10Q8NFP7 164 aa10.59□□□□□ -0.71
CDK4-215ENST00000553237 NUDT11Q96G61 164 aa10.59□□□□□ -0.71
CDK4-215ENST00000553237 TM2D2Q9BX73 214 aa10.59□□□□□ -0.71
CDK4-215ENST00000553237 XKRY2A2RUG3 117 aa10.58□□□□□ -0.72
CDK4-215ENST00000553237 IGLC6P0CF74 106 aa10.58□□□□□ -0.72
CDK4-215ENST00000553237 Q8N814 137 aa10.58□□□□□ -0.72
CDK4-215ENST00000553237 RNASE7Q9H1E1 156 aaKnown RBP10.58□□□□□ -0.72
CDK4-215ENST00000553237 RPL36AP83881 106 aaKnown RBP10.57□□□□□ -0.72
CDK4-215ENST00000553237 RPL36ALQ969Q0 106 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms