RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 FAM210BQ96KR6 192 aa5.35□□□□□ -1.55
NPAS3-213ENST00000552874 RPP21Q9H633 154 aaKnown RBP5.35□□□□□ -1.55
NPAS3-213ENST00000552874 OSTCQ9NRP0 149 aa5.35□□□□□ -1.55
NPAS3-213ENST00000552874 NAT8Q9UHE5 227 aa5.35□□□□□ -1.55
NPAS3-213ENST00000552874 KIF25-AS1Q9Y6Z4 181 aa5.35□□□□□ -1.55
NPAS3-213ENST00000552874 LCE6AA0A183 80 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 P01737 135 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 IGHV3-53P01767 116 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 CRYGDP07320 174 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 GATA1P15976 413 aaPredicted RBP5.34□□□□□ -1.55
NPAS3-213ENST00000552874 LINC00315P59091 139 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 C10orf91Q5T1B1 145 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 UQCC3Q6UW78 93 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 Q6ZSN1 163 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 COMMD7Q86VX2 200 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 LINC00476Q8WZB0 136 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 SFRP2Q96HF1 295 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 SAMD10Q9BYL1 202 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 BIN3Q9NQY0 253 aa5.34□□□□□ -1.55
NPAS3-213ENST00000552874 TRGV2A0A075B6R0 118 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 TRAV26-1A0A087WT03 109 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 IGLL5B9A064 214 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 H3BNG1 76 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 HTN3P15516 51 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 CRYBA4P53673 196 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 FOXA3P55318 350 aaPredicted RBP5.33□□□□□ -1.56
NPAS3-213ENST00000552874 TCTAP57738 103 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 RPS20P60866 119 aaKnown RBP5.33□□□□□ -1.56
NPAS3-213ENST00000552874 TMEM241Q24JQ0 296 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 SOHLH1Q5JUK2 328 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 ZFP2Q6ZN57 461 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 ZFP82Q8N141 532 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 KLK5Q9Y337 293 aaPredicted RBP5.33□□□□□ -1.56
NPAS3-213ENST00000552874 LRP1BQ9NZR2 4599 aa5.33□□□□□ -1.56
NPAS3-213ENST00000552874 DNAH8Q96JB1 4490 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 A0A096LPF7 62 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 MUC21A0A0G2JKD1 596 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 MUC21A0A140T8X8 626 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 TMEM218A2RU14 115 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 F5H768 121 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 GATCO43716 136 aaKnown RBP5.32□□□□□ -1.56
NPAS3-213ENST00000552874 S100A4P26447 101 aaKnown RBP5.32□□□□□ -1.56
NPAS3-213ENST00000552874 ADIRFQ15847 76 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 LYZL1Q6UWQ5 148 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 FER1L6-AS1Q8NA97 138 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 C15orf53Q8NAA6 179 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 MSRB1Q9NZV6 116 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 Q9UF83 564 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 BIRC6Q9NR09 4857 aa5.32□□□□□ -1.56
NPAS3-213ENST00000552874 LOC100131303A0A0U1RQF7 123 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 TMEM238LA0A1B0GVL6 79 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 A0A1W2PPQ1 181 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 FAM231BA6NCW3 169 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 A8MWV9 139 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 M0R381 172 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 WDR73Q6P4I2 378 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 C14orf178Q8N769 122 aaPredicted RBP5.31□□□□□ -1.56
NPAS3-213ENST00000552874 SLC25A29Q8N8R3 303 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 OR4C5Q8NGB2 326 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 TSKUQ8WUA8 353 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 GFRA4Q9GZZ7 299 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 PRO0255Q9UI72 69 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 CARHSP1Q9Y2V2 147 aaKnown RBP5.31□□□□□ -1.56
NPAS3-213ENST00000552874 PHLDA3Q9Y5J5 127 aa5.31□□□□□ -1.56
NPAS3-213ENST00000552874 A0A0J9YY99 117 aa5.3□□□□□ -1.56
NPAS3-213ENST00000552874 TRBV6-4A0A1B0GX49 114 aa5.3□□□□□ -1.56
NPAS3-213ENST00000552874 SMIM27A0A1W2PRY6 76 aa5.3□□□□□ -1.56
NPAS3-213ENST00000552874 RHODO00212 210 aa5.3□□□□□ -1.56
NPAS3-213ENST00000552874 CIDEAO60543 219 aa5.3□□□□□ -1.56
NPAS3-213ENST00000552874 ERVFC1-1P60608 527 aa5.3□□□□□ -1.56
NPAS3-213ENST00000552874 PNRC1Q12796 327 aaPredicted RBP5.3□□□□□ -1.56
NPAS3-213ENST00000552874 LGALS9CQ6DKI2 356 aa5.3□□□□□ -1.56
NPAS3-213ENST00000552874 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
NPAS3-213ENST00000552874 SYT8Q8NBV8 401 aa5.3□□□□□ -1.56
NPAS3-213ENST00000552874 DAZAP1Q96EP5 407 aaKnown RBP5.3□□□□□ -1.56
NPAS3-213ENST00000552874 SEC11CQ9BY50 192 aa5.3□□□□□ -1.56
NPAS3-213ENST00000552874 APOBP04114 4563 aaKnown RBP5.3□□□□□ -1.56
NPAS3-213ENST00000552874 A0A087WWL8 130 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 IGHV3-73A0A0B4J1V6 119 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 A0A1B0GXF2 115 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 XKRY2A2RUG3 117 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 PCP4L1A6NKN8 68 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 HIGD1CA8MV81 97 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 A8MWL6 223 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 F2Z2F3 143 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 F8W036 122 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 K7EQD1 137 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 PAX4O43316 350 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 SCO1O75880 301 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 P0DMU3 169 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 FAM231AP0DMU4 169 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 FAM231CP0DMU5 169 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 CACNG7P62955 275 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 RNF212Q495C1 297 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 ANKRD39Q53RE8 183 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 NUP35Q8NFH5 326 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 OR10G8Q8NGN5 311 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 AP1S3Q96PC3 154 aa5.29□□□□□ -1.56
NPAS3-213ENST00000552874 HHLA3Q9XRX5 114 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms