RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 TMEM141Q96I45 108 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 RHPN1-AS1Q9BWJ2 59 aa4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 ANKHD1Q8IWZ3 2542 aaKnown RBP4.48□□□□□ -1.69
CHMP4A-210ENST00000552620 BOD1L1Q8NFC6 3051 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 DMXL1Q9Y485 3027 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 TRBV7-3A0A075B6L6 115 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 IGLV5-39A0A0G2JS06 123 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 A0A1B0GWB2 263 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 TMEM89A2RUT3 159 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 KLLNB2CW77 178 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 J3QR89 54 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 RNASE3P12724 160 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 HERVK_113P61574 105 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 FAM159AQ6UWV7 190 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 C2orf66Q6UXQ4 117 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 C10orf105Q8TEF2 133 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 HIST1H4GQ99525 98 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 PRORYQ9H606 182 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 DAZ1Q9NQZ3 744 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 NHP2Q9NX24 153 aaKnown RBP4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 CYSLTR1Q9Y271 337 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 KIF25-AS1Q9Y6Z4 181 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 WNK2Q9Y3S1 2297 aa4.47□□□□□ -1.69
CHMP4A-210ENST00000552620 AKAP13Q12802 2813 aa4.46□□□□□ -1.69
CHMP4A-210ENST00000552620 BSNQ9UPA5 3926 aa4.46□□□□□ -1.69
CHMP4A-210ENST00000552620 ADGRG4Q8IZF6 3080 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 ANKRD11Q6UB99 2663 aaPredicted RBP4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 IGHV4-61A0A0C4DH41 118 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 TRBV6-5A0A0K0K1A5 114 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 H3BUX3 64 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 GNRH2O43555 120 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 SAP30O75446 220 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 TRBV12-3P01733 135 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 MGPP08493 103 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 POLR2KP53803 58 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 DSCR9P59020 149 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 RRN3P1Q2M238 152 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 Q6ZQT7 251 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 BAALCQ8WXS3 180 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 ZNF479Q96JC4 524 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 TIMM17AQ99595 171 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 NAA38Q9BRA0 125 aaKnown RBP4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 TTTY13Q9BZ97 58 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 LINC00527Q9UJ94 153 aa4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 PTPRZ1P23471 2315 aaPredicted RBP4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 ZFHX2Q9C0A1 2572 aaPredicted RBP4.46□□□□□ -1.7
CHMP4A-210ENST00000552620 IGHV3OR16-10A0A075B7F0 116 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 IGIPA6NJ69 53 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 C19orf84I3L1E1 186 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 LGALS9O00182 355 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 DUSP14O95147 198 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 IGHV3-11P01762 117 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 MSMBP08118 114 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 LGALS1P09382 135 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 VPREB1P12018 145 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 RIPPLY3P57055 190 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 LINC00315P59091 139 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 SCGB2A2Q13296 93 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 PMVKQ15126 192 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 ZFP2Q6ZN57 461 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 Q6ZSV7 163 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 RPL39LQ96EH5 51 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 KIR2DL4Q99706 377 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 CCL19Q99731 98 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 PRADC1Q9BSG0 188 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 ZFHX4Q86UP3 3567 aa4.45□□□□□ -1.7
CHMP4A-210ENST00000552620 DMXL2Q8TDJ6 3036 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 SPENQ96T58 3664 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 TRBV27A0A0K0K1C4 114 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 C11orf86A6NJI1 115 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 ZNF815PA8K554 130 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 B4DSR2 109 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 K7ERJ3 54 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 KALRNO60229 2985 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 CRYGDP07320 174 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 IGHV4-38-2P0DP08 117 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 SCGB1A1P11684 91 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 COX6B1P14854 86 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 BLCAPP62952 87 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 RPL24P83731 157 aaKnown RBP4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 RHOHQ15669 191 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 LY6EQ16553 131 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 BRD3OSQ6XYD6 125 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 DCANP1Q8TF63 244 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 SPANXB1Q9NS25 103 aaPredicted RBP4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 GVINP1Q7Z2Y8 2422 aa4.44□□□□□ -1.7
CHMP4A-210ENST00000552620 PIEZO2Q9H5I5 2752 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 IGHV3-16A0A0C4DH30 117 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 IGHV4-28A0A0C4DH34 117 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 F6UB75 175 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 CD7P09564 240 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 PSMB8P28062 276 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 UBE2D1P51668 147 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 ATP5J2P56134 94 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 SNRPD3P62318 126 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 SRSF9Q13242 221 aaKnown RBP eCLIP4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 LY6DQ14210 128 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 LYRM7Q5U5X0 104 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 SCGB1D4Q6XE38 83 aa4.43□□□□□ -1.7
CHMP4A-210ENST00000552620 TRPT1Q86TN4 253 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms