RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 C7orf66A4D0T2 115 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 RBAKDNA6NC62 111 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 PGPA6NDG6 321 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 F6UZH7 168 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 CST7O76096 145 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 CRPP02741 224 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 FAUP35544 74 aaKnown RBP3.37□□□□□ -1.87
HOXB3-213ENST00000552000 RPL29P47914 159 aaKnown RBP3.37□□□□□ -1.87
HOXB3-213ENST00000552000 RPL19P84098 196 aaKnown RBP3.37□□□□□ -1.87
HOXB3-213ENST00000552000 BAXQ07812 192 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 Q0VG73 95 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 FOXI1Q12951 378 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 CTF1Q16619 201 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 IAH1Q2TAA2 248 aaPredicted RBP3.37□□□□□ -1.87
HOXB3-213ENST00000552000 ZNF506Q5JVG8 444 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 SPANXN2Q5MJ10 180 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 KCNIP4Q6PIL6 250 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 MIR17HGQ75NE6 70 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 C14orf178Q8N769 122 aaPredicted RBP3.37□□□□□ -1.87
HOXB3-213ENST00000552000 OR10G9Q8NGN4 311 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 OR2T35Q8NGX2 323 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 C7orf33Q8WU49 177 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 ASB13Q8WXK3 278 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 KCNS1Q96KK3 526 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 FAM167A-AS1Q96KT0 104 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 C20orf85Q9H1P6 137 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 UQCC1Q9NVA1 299 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 GSKIPQ9P0R6 139 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 LENEPQ9Y5L5 61 aa3.37□□□□□ -1.87
HOXB3-213ENST00000552000 C9orf170A2RU37 121 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 FAM24AA6NFZ4 105 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 TMEM262E9PQX1 116 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 FGF7P21781 194 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 BCAP31P51572 246 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 RANP62826 216 aaKnown RBP3.36□□□□□ -1.87
HOXB3-213ENST00000552000 PRR3P79522 188 aaKnown RBP3.36□□□□□ -1.87
HOXB3-213ENST00000552000 REG3GQ6UW15 175 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 ENHOQ6UWT2 76 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 C15orf54Q8N8G6 183 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 GTSF1Q8WW33 167 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 FXYD5Q96DB9 178 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 RNF185Q96GF1 192 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 SGK494Q96LW2 274 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 C9orf85Q96MD7 179 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 SLC25A21Q9BQT8 299 aaPredicted RBP3.36□□□□□ -1.87
HOXB3-213ENST00000552000 CHCHD7Q9BUK0 85 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 PARLQ9H300 379 aa3.36□□□□□ -1.87
HOXB3-213ENST00000552000 RSL24D1Q9UHA3 163 aaKnown RBP3.36□□□□□ -1.87
HOXB3-213ENST00000552000 HSBP1L1C9JCN9 74 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 OR7C2O60412 319 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 FGF8P55075 233 aaPredicted RBP3.35□□□□□ -1.87
HOXB3-213ENST00000552000 LGALSLQ3ZCW2 172 aaPredicted RBP3.35□□□□□ -1.87
HOXB3-213ENST00000552000 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 TOMM5Q8N4H5 51 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 OR2G3Q8NGZ4 309 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 SPACA4Q8TDM5 124 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 TMED6Q8WW62 240 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 TVP23CQ96ET8 276 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 HYLS1Q96M11 299 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 LINC00479Q96M42 142 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 NMES1Q9C002 83 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 JPT2Q9H910 190 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 TREM1Q9NP99 234 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 PLAC8Q9NZF1 115 aa3.35□□□□□ -1.87
HOXB3-213ENST00000552000 LSM5Q9Y4Y9 91 aaKnown RBP3.35□□□□□ -1.87
HOXB3-213ENST00000552000 IGHV3-64A0A075B6Q5 118 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 hDV102S1A0JD36 115 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 ATP6V1G2O95670 118 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 ANGP03950 147 aaKnown RBP3.34□□□□□ -1.87
HOXB3-213ENST00000552000 AP3S2P59780 193 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 SEC61GP60059 68 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 CNBPP62633 177 aaKnown RBP3.34□□□□□ -1.87
HOXB3-213ENST00000552000 UBE2L3P68036 154 aaKnown RBP3.34□□□□□ -1.87
HOXB3-213ENST00000552000 SPCS2Q15005 226 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 MPV17L2Q567V2 206 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 PIK3CD-AS1Q5SR53 167 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 CLPSL2Q6UWE3 100 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 SPINK6Q6UWN8 80 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 ZFP2Q6ZN57 461 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 GOLT1AQ6ZVE7 132 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 TMEM75Q8N9X5 138 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 LYPD6BQ8NI32 183 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 FAM210AQ96ND0 272 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 FLVCR2Q9UPI3 526 aa3.34□□□□□ -1.87
HOXB3-213ENST00000552000 IGSF23A1L1A6 192 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 A8MWV9 139 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 CCSO14618 274 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 RNASE3P12724 160 aaKnown RBP3.33□□□□□ -1.88
HOXB3-213ENST00000552000 SULT1A1P50225 295 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 ZNF80P51504 273 aaPredicted RBP3.33□□□□□ -1.88
HOXB3-213ENST00000552000 SEC61BP60468 96 aaKnown RBP3.33□□□□□ -1.88
HOXB3-213ENST00000552000 MIAQ16674 131 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 PYDC2Q56P42 97 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 PAPPA-AS1Q5QFB9 102 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 UFSP1Q6NVU6 142 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 KRTAP26-1Q6PEX3 210 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 OR11H4Q8NGC9 324 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 OR10G7Q8NGN6 311 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 CMTM2Q8TAZ6 248 aa3.33□□□□□ -1.88
HOXB3-213ENST00000552000 PTH2Q96A98 100 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms