RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SAP30O75446 220 aa8.42□□□□□ -1.06
RAB5C-208ENST00000551338 PPP1R17O96001 155 aa8.42□□□□□ -1.06
RAB5C-208ENST00000551338 INSP01308 110 aa8.42□□□□□ -1.06
RAB5C-208ENST00000551338 IGLV1-51P01701 117 aa8.42□□□□□ -1.06
RAB5C-208ENST00000551338 CRYGDP07320 174 aa8.42□□□□□ -1.06
RAB5C-208ENST00000551338 RPL32P62910 135 aaKnown RBP8.42□□□□□ -1.06
RAB5C-208ENST00000551338 TRPT1Q86TN4 253 aaKnown RBP8.42□□□□□ -1.06
RAB5C-208ENST00000551338 ZNF469Q96JG9 3925 aaPredicted RBP8.42□□□□□ -1.06
RAB5C-208ENST00000551338 WNK1Q9H4A3 2382 aa8.41□□□□□ -1.06
RAB5C-208ENST00000551338 NBPF19A0A087WUL8 3843 aa8.41□□□□□ -1.06
RAB5C-208ENST00000551338 OR11H12B2RN74 326 aa8.41□□□□□ -1.06
RAB5C-208ENST00000551338 M0R143 59 aa8.41□□□□□ -1.06
RAB5C-208ENST00000551338 HNRNPA3P51991 378 aaKnown RBP8.41□□□□□ -1.06
RAB5C-208ENST00000551338 ZNF415Q09FC8 603 aa8.41□□□□□ -1.06
RAB5C-208ENST00000551338 MORN3Q6PF18 240 aaPredicted RBP8.41□□□□□ -1.06
RAB5C-208ENST00000551338 Q6ZN92 141 aa8.41□□□□□ -1.06
RAB5C-208ENST00000551338 NDUFA11Q86Y39 141 aa8.41□□□□□ -1.06
RAB5C-208ENST00000551338 TP73-AS1Q9UF72 201 aa8.41□□□□□ -1.06
RAB5C-208ENST00000551338 GOLT1BQ9Y3E0 138 aa8.41□□□□□ -1.06
RAB5C-208ENST00000551338 ACANP16112 2415 aa8.41□□□□□ -1.06
RAB5C-208ENST00000551338 TRBV6-5A0A0K0K1A5 114 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 K7EMI3 77 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 ATP5LO75964 103 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 PRM2P04554 102 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
RAB5C-208ENST00000551338 ODF1Q14990 250 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 ZNF56Q15929 161 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 ORMDL2Q53FV1 153 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 LBHQ53QV2 105 aaPredicted RBP8.4□□□□□ -1.06
RAB5C-208ENST00000551338 ANKRD39Q53RE8 183 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 FAM74A4Q5TZK3 123 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 C11orf72Q8NBR9 251 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 CSTL1Q9H114 145 aa8.4□□□□□ -1.06
RAB5C-208ENST00000551338 HSBP1L1C9JCN9 74 aa8.39□□□□□ -1.07
RAB5C-208ENST00000551338 F5H697 171 aa8.39□□□□□ -1.07
RAB5C-208ENST00000551338 NUDT3O95989 172 aa8.39□□□□□ -1.07
RAB5C-208ENST00000551338 ZNF876PQ49A33 203 aa8.39□□□□□ -1.07
RAB5C-208ENST00000551338 NEGR1Q7Z3B1 354 aa8.39□□□□□ -1.07
RAB5C-208ENST00000551338 STHQ8IWL8 128 aa8.39□□□□□ -1.07
RAB5C-208ENST00000551338 PTH2Q96A98 100 aa8.39□□□□□ -1.07
RAB5C-208ENST00000551338 TOMM6Q96B49 74 aa8.39□□□□□ -1.07
RAB5C-208ENST00000551338 C19orf73Q9NVV2 129 aa8.39□□□□□ -1.07
RAB5C-208ENST00000551338 DKK2Q9UBU2 259 aa8.39□□□□□ -1.07
RAB5C-208ENST00000551338 CENPEQ02224 2701 aa8.38□□□□□ -1.07
RAB5C-208ENST00000551338 M0QY20 66 aa8.38□□□□□ -1.07
RAB5C-208ENST00000551338 FOSL1P15407 271 aa8.38□□□□□ -1.07
RAB5C-208ENST00000551338 HTN1P15515 57 aa8.38□□□□□ -1.07
RAB5C-208ENST00000551338 CMC4P56277 68 aaPredicted RBP8.38□□□□□ -1.07
RAB5C-208ENST00000551338 BEAN1Q3B7T3 259 aa8.38□□□□□ -1.07
RAB5C-208ENST00000551338 C1orf158Q8N1D5 194 aa8.38□□□□□ -1.07
RAB5C-208ENST00000551338 LINC01587Q99440 93 aa8.38□□□□□ -1.07
RAB5C-208ENST00000551338 FAM110AQ9BQ89 295 aa8.38□□□□□ -1.07
RAB5C-208ENST00000551338 ZMAT4Q9H898 229 aa8.38□□□□□ -1.07
RAB5C-208ENST00000551338 MXRA5Q9NR99 2828 aa8.38□□□□□ -1.07
RAB5C-208ENST00000551338 HELZ2Q9BYK8 2649 aaKnown RBP8.37□□□□□ -1.07
RAB5C-208ENST00000551338 A0A1B0GV90 55 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 SDHAF1A6NFY7 115 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 M0R2P5 195 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 PIK3CD-AS1Q5SR53 167 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 UFSP1Q6NVU6 142 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 C2orf66Q6UXQ4 117 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 LINC00482Q8N8I6 264 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 IL17DQ8TAD2 202 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 WFDC10AQ9H1F0 79 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 EDA2RQ9HAV5 297 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 XCL2Q9UBD3 114 aa8.37□□□□□ -1.07
RAB5C-208ENST00000551338 MRPS16Q9Y3D3 137 aaKnown RBP8.37□□□□□ -1.07
RAB5C-208ENST00000551338 FASNP49327 2511 aaKnown RBP8.37□□□□□ -1.07
RAB5C-208ENST00000551338 PRSS1P07477 247 aa8.36□□□□□ -1.07
RAB5C-208ENST00000551338 COX8AP10176 69 aa8.36□□□□□ -1.07
RAB5C-208ENST00000551338 SLC25A34Q6PIV7 304 aa8.36□□□□□ -1.07
RAB5C-208ENST00000551338 SPXQ9BT56 116 aa8.36□□□□□ -1.07
RAB5C-208ENST00000551338 MYO9AB2RTY4 2548 aa8.36□□□□□ -1.07
RAB5C-208ENST00000551338 TRBV27A0A0K0K1C4 114 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 A8MWV9 139 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 VCYO14598 125 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 CRLF1O75462 422 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 PF4P02776 101 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 FGF6P10767 208 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 RIPPLY3P57055 190 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 ZFP2Q6ZN57 461 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 SCGB3A1Q96QR1 104 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 MRPL16Q9NX20 251 aaKnown RBP8.35□□□□□ -1.07
RAB5C-208ENST00000551338 UNC79Q9P2D8 2635 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 HIVEP2P31629 2446 aa8.35□□□□□ -1.07
RAB5C-208ENST00000551338 A0A087WX48 190 aa8.34□□□□□ -1.07
RAB5C-208ENST00000551338 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
RAB5C-208ENST00000551338 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.34□□□□□ -1.07
RAB5C-208ENST00000551338 DPM2O94777 84 aa8.34□□□□□ -1.07
RAB5C-208ENST00000551338 IGKCP01834 107 aa8.34□□□□□ -1.07
RAB5C-208ENST00000551338 GIG44P09565 113 aaPredicted RBP8.34□□□□□ -1.07
RAB5C-208ENST00000551338 AZU1P20160 251 aa8.34□□□□□ -1.07
RAB5C-208ENST00000551338 C2orf91Q6ZV80 131 aa8.34□□□□□ -1.07
RAB5C-208ENST00000551338 STPG4Q8N801 248 aa8.34□□□□□ -1.07
RAB5C-208ENST00000551338 RS1O15537 224 aa8.33□□□□□ -1.08
RAB5C-208ENST00000551338 NUTF2P61970 127 aaKnown RBP8.33□□□□□ -1.08
RAB5C-208ENST00000551338 BATFQ16520 125 aa8.33□□□□□ -1.08
RAB5C-208ENST00000551338 CFAP126Q5VTH2 177 aa8.33□□□□□ -1.08
RAB5C-208ENST00000551338 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.33□□□□□ -1.08
RAB5C-208ENST00000551338 NEXN-AS1Q8NBZ9 246 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms