RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
ERBB3-215ENST00000550828 LCE6AA0A183 80 aa9.47□□□□□ -0.89
ERBB3-215ENST00000550828 ZFAND6Q6FIF0 208 aa9.47□□□□□ -0.89
ERBB3-215ENST00000550828 SVBPQ8N300 66 aa9.47□□□□□ -0.89
ERBB3-215ENST00000550828 OR4C5Q8NGB2 326 aa9.47□□□□□ -0.89
ERBB3-215ENST00000550828 CTDSP1Q9GZU7 261 aa9.47□□□□□ -0.89
ERBB3-215ENST00000550828 NAT8BQ9UHF3 227 aa9.47□□□□□ -0.89
ERBB3-215ENST00000550828 PLECQ15149 4684 aaKnown RBP9.47□□□□□ -0.89
ERBB3-215ENST00000550828 A0A1B0GUT8 65 aa9.46□□□□□ -0.9
ERBB3-215ENST00000550828 A8MWV9 139 aa9.46□□□□□ -0.9
ERBB3-215ENST00000550828 F5H768 121 aa9.46□□□□□ -0.9
ERBB3-215ENST00000550828 EVI2AP22794 236 aa9.46□□□□□ -0.9
ERBB3-215ENST00000550828 C14orf178Q8N769 122 aaPredicted RBP9.46□□□□□ -0.9
ERBB3-215ENST00000550828 RPS10P5Q9NQ39 176 aa9.46□□□□□ -0.9
ERBB3-215ENST00000550828 TENM2Q9NT68 2774 aa9.45□□□□□ -0.9
ERBB3-215ENST00000550828 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
ERBB3-215ENST00000550828 SNAPINO95295 136 aa9.45□□□□□ -0.9
ERBB3-215ENST00000550828 GATA1P15976 413 aaPredicted RBP9.45□□□□□ -0.9
ERBB3-215ENST00000550828 TWIST1Q15672 202 aa9.45□□□□□ -0.9
ERBB3-215ENST00000550828 TMEM88Q6PEY1 159 aa9.45□□□□□ -0.9
ERBB3-215ENST00000550828 CEMP1Q6PRD7 247 aaPredicted RBP9.45□□□□□ -0.9
ERBB3-215ENST00000550828 VSIG2Q96IQ7 327 aa9.45□□□□□ -0.9
ERBB3-215ENST00000550828 AP1S3Q96PC3 154 aa9.45□□□□□ -0.9
ERBB3-215ENST00000550828 Q9UF83 564 aa9.45□□□□□ -0.9
ERBB3-215ENST00000550828 FAM74A4Q5TZK3 123 aa9.44□□□□□ -0.9
ERBB3-215ENST00000550828 MRPL54Q6P161 138 aaKnown RBP9.44□□□□□ -0.9
ERBB3-215ENST00000550828 TMEM242Q9NWH2 141 aa9.44□□□□□ -0.9
ERBB3-215ENST00000550828 BIRC6Q9NR09 4857 aa9.44□□□□□ -0.9
ERBB3-215ENST00000550828 DNAH1Q9P2D7 4330 aa9.43□□□□□ -0.9
ERBB3-215ENST00000550828 TRAV26-1A0A087WT03 109 aa9.43□□□□□ -0.9
ERBB3-215ENST00000550828 A0A0J9YY99 117 aa9.43□□□□□ -0.9
ERBB3-215ENST00000550828 LOC100131303A0A0U1RQF7 123 aa9.43□□□□□ -0.9
ERBB3-215ENST00000550828 CRYBA4P53673 196 aa9.43□□□□□ -0.9
ERBB3-215ENST00000550828 ZFP2Q6ZN57 461 aa9.43□□□□□ -0.9
ERBB3-215ENST00000550828 IMMP2LQ96T52 175 aa9.43□□□□□ -0.9
ERBB3-215ENST00000550828 URGCP-MRPS24S4R325 110 aa9.43□□□□□ -0.9
ERBB3-215ENST00000550828 VPS13DQ5THJ4 4388 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 TRGV4A0A0C4DH28 118 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 RHODO00212 210 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 ATP6V1G1O75348 118 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 TRGC1P0CF51 173 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 P0DMU3 169 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 FAM231AP0DMU4 169 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 FAM231CP0DMU5 169 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 RIGQ13278 110 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 SLC25A29Q8N8R3 303 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 GATD1Q8NB37 220 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 RNF185Q96GF1 192 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 YPEL4Q96NS1 127 aa9.42□□□□□ -0.9
ERBB3-215ENST00000550828 NUPR2A6NF83 97 aa9.41□□□□□ -0.9
ERBB3-215ENST00000550828 CBLN2Q8IUK8 224 aa9.41□□□□□ -0.9
ERBB3-215ENST00000550828 BORCS7Q96B45 105 aa9.41□□□□□ -0.9
ERBB3-215ENST00000550828 DPH3P1Q9H4G8 78 aa9.41□□□□□ -0.9
ERBB3-215ENST00000550828 PRO0255Q9UI72 69 aa9.41□□□□□ -0.9
ERBB3-215ENST00000550828 HHLA3Q9XRX5 114 aa9.41□□□□□ -0.9
ERBB3-215ENST00000550828 IGLL5B9A064 214 aa9.4□□□□□ -0.9
ERBB3-215ENST00000550828 GAS8-AS1O95177 125 aa9.4□□□□□ -0.9
ERBB3-215ENST00000550828 MGPP08493 103 aa9.4□□□□□ -0.9
ERBB3-215ENST00000550828 CAMPP49913 170 aa9.4□□□□□ -0.9
ERBB3-215ENST00000550828 HBBP68871 147 aa9.4□□□□□ -0.9
ERBB3-215ENST00000550828 ZNF56Q15929 161 aa9.4□□□□□ -0.9
ERBB3-215ENST00000550828 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.9
ERBB3-215ENST00000550828 ATP5L2Q7Z4Y8 100 aa9.4□□□□□ -0.9
ERBB3-215ENST00000550828 AMN1Q8IY45 258 aa9.4□□□□□ -0.9
ERBB3-215ENST00000550828 TMEM191AQ9H0A3 160 aa9.4□□□□□ -0.9
ERBB3-215ENST00000550828 ALMS1Q8TCU4 4167 aa9.4□□□□□ -0.91
ERBB3-215ENST00000550828 TRAV26-2A0A0B4J265 109 aa9.39□□□□□ -0.91
ERBB3-215ENST00000550828 PAX4O43316 350 aa9.39□□□□□ -0.91
ERBB3-215ENST00000550828 CIDEAO60543 219 aa9.39□□□□□ -0.91
ERBB3-215ENST00000550828 SCO1O75880 301 aa9.39□□□□□ -0.91
ERBB3-215ENST00000550828 RAB4BP61018 213 aa9.39□□□□□ -0.91
ERBB3-215ENST00000550828 ELOBQ15370 118 aa9.39□□□□□ -0.91
ERBB3-215ENST00000550828 BTF3L4Q96K17 158 aa9.39□□□□□ -0.91
ERBB3-215ENST00000550828 APLNQ9ULZ1 77 aa9.39□□□□□ -0.91
ERBB3-215ENST00000550828 EPPK1P58107 5090 aaKnown RBP9.38□□□□□ -0.91
ERBB3-215ENST00000550828 TRAV9-1A0A075B6T8 112 aa9.38□□□□□ -0.91
ERBB3-215ENST00000550828 A0A096LPF7 62 aa9.38□□□□□ -0.91
ERBB3-215ENST00000550828 TGIF2-C20orf24A0A0A6YYL0 155 aa9.38□□□□□ -0.91
ERBB3-215ENST00000550828 TRBV6-4A0A1B0GX49 114 aa9.38□□□□□ -0.91
ERBB3-215ENST00000550828 K7EQD1 137 aa9.38□□□□□ -0.91
ERBB3-215ENST00000550828 M0QY20 66 aa9.38□□□□□ -0.91
ERBB3-215ENST00000550828 SMIM17P0DL12 118 aa9.38□□□□□ -0.91
ERBB3-215ENST00000550828 LINC00694P0DN24 101 aa9.38□□□□□ -0.91
ERBB3-215ENST00000550828 KCNIP4Q6PIL6 250 aa9.38□□□□□ -0.91
ERBB3-215ENST00000550828 RYR2Q92736 4967 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 A0A1B0GW15 77 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 H3BNG1 76 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 GYPEP15421 78 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 RAB4AP20338 218 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 SLAQ13239 276 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 RHOHQ15669 191 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 FAM104BQ5XKR9 115 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 TMEM136Q6ZRR5 245 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 FAM210BQ96KR6 192 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 KRTAP17-1Q9BYP8 105 aa9.37□□□□□ -0.91
ERBB3-215ENST00000550828 F5H697 171 aa9.36□□□□□ -0.91
ERBB3-215ENST00000550828 SMKR1H3BMG3 65 aa9.36□□□□□ -0.91
ERBB3-215ENST00000550828 S100PP25815 95 aa9.36□□□□□ -0.91
ERBB3-215ENST00000550828 MRPL51Q4U2R6 128 aaKnown RBP9.36□□□□□ -0.91
ERBB3-215ENST00000550828 NEXN-AS1Q8NBZ9 246 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms