RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 Q6ZSA8 131 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 PRNTQ86SH4 94 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 FAM30AQ9NZY2 134 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 COX11Q9Y6N1 276 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 RNF213Q63HN8 5207 aa5.05□□□□□ -1.6
NEK3-201ENST00000550331 A0A087WWC5 75 aa5.04□□□□□ -1.6
NEK3-201ENST00000550331 IGKV3D-20A0A0C4DH25 116 aa5.04□□□□□ -1.6
NEK3-201ENST00000550331 A0A1W2PRE2 83 aa5.04□□□□□ -1.6
NEK3-201ENST00000550331 PLA2G1BP04054 148 aaKnown RBP5.04□□□□□ -1.6
NEK3-201ENST00000550331 ATP6V0CP27449 155 aa5.04□□□□□ -1.6
NEK3-201ENST00000550331 HSD17B11Q8NBQ5 300 aa5.04□□□□□ -1.6
NEK3-201ENST00000550331 AQP10Q96PS8 301 aa5.04□□□□□ -1.6
NEK3-201ENST00000550331 ACTR3CQ9C0K3 210 aaPredicted RBP5.04□□□□□ -1.6
NEK3-201ENST00000550331 PLA2G2DQ9UNK4 145 aa5.04□□□□□ -1.6
NEK3-201ENST00000550331 GAGE12JA6NER3 117 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 FABP5P3A8MUU1 101 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 RHODO00212 210 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 SEC11BP0C7V7 166 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 S100A4P26447 101 aaKnown RBP5.03□□□□□ -1.6
NEK3-201ENST00000550331 ASIPP42127 132 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 FGF8P55075 233 aaPredicted RBP5.03□□□□□ -1.6
NEK3-201ENST00000550331 GAGE1Q13065 139 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 GAGE4Q13068 117 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 GAGE5Q13069 117 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 WFDC2Q14508 124 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 LGALSLQ3ZCW2 172 aaPredicted RBP5.03□□□□□ -1.6
NEK3-201ENST00000550331 GAGE13Q4V321 117 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 UFSP1Q6NVU6 142 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 DAZ4Q86SG3 579 aaKnown RBP5.03□□□□□ -1.6
NEK3-201ENST00000550331 RMI2Q96E14 147 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 LINC00479Q96M42 142 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 DAZ3Q9NR90 486 aaKnown RBP5.03□□□□□ -1.6
NEK3-201ENST00000550331 IL36BQ9NZH7 164 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 TNFSF18Q9UNG2 199 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 ARL2-SNX15V9GYD0 113 aa5.03□□□□□ -1.6
NEK3-201ENST00000550331 PRSS47A8MTI9 375 aa5.02□□□□□ -1.61
NEK3-201ENST00000550331 DNLZQ5SXM8 178 aa5.02□□□□□ -1.61
NEK3-201ENST00000550331 OR2T35Q8NGX2 323 aa5.02□□□□□ -1.61
NEK3-201ENST00000550331 DEFB104AQ8WTQ1 72 aa5.02□□□□□ -1.61
NEK3-201ENST00000550331 URGCP-MRPS24S4R325 110 aa5.02□□□□□ -1.61
NEK3-201ENST00000550331 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.01□□□□□ -1.61
NEK3-201ENST00000550331 TRAV34A0A0B4J273 112 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 B4DEV8 164 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 H3BVH4 76 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 PEX7O00628 323 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 LECT2O14960 151 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 IFNA7P01567 189 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 COX8CQ7Z4L0 72 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 Q86TA4 180 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 NIT1Q86X76 327 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 C14orf178Q8N769 122 aaPredicted RBP5.01□□□□□ -1.61
NEK3-201ENST00000550331 Q8N976 141 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 OR11H4Q8NGC9 324 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 HIST1H2BAQ96A08 127 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 CHCHD7Q9BUK0 85 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 SAMD10Q9BYL1 202 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 NKX6-2Q9C056 277 aaPredicted RBP5.01□□□□□ -1.61
NEK3-201ENST00000550331 Q9UF83 564 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 ALG5Q9Y673 324 aa5.01□□□□□ -1.61
NEK3-201ENST00000550331 TRBV10-1A0A0K0K1A3 114 aa5□□□□□ -1.61
NEK3-201ENST00000550331 CTXND1A0A1B0GTU2 59 aa5□□□□□ -1.61
NEK3-201ENST00000550331 RNF222A6NCQ9 220 aa5□□□□□ -1.61
NEK3-201ENST00000550331 KRBOX1C9JBD0 128 aa5□□□□□ -1.61
NEK3-201ENST00000550331 ARMS2P0C7Q2 107 aa5□□□□□ -1.61
NEK3-201ENST00000550331 ELOBQ15370 118 aa5□□□□□ -1.61
NEK3-201ENST00000550331 ZNF726P1Q15940 193 aa5□□□□□ -1.61
NEK3-201ENST00000550331 ATRAIDQ6UW56 229 aa5□□□□□ -1.61
NEK3-201ENST00000550331 SCXQ7RTU7 201 aa5□□□□□ -1.61
NEK3-201ENST00000550331 BAALCQ8WXS3 180 aa5□□□□□ -1.61
NEK3-201ENST00000550331 SFRP2Q96HF1 295 aa5□□□□□ -1.61
NEK3-201ENST00000550331 TCEAL7Q9BRU2 100 aa5□□□□□ -1.61
NEK3-201ENST00000550331 JPT2Q9H910 190 aa5□□□□□ -1.61
NEK3-201ENST00000550331 ZFP30Q9Y2G7 519 aa5□□□□□ -1.61
NEK3-201ENST00000550331 PKHD1L1Q86WI1 4243 aa5□□□□□ -1.61
NEK3-201ENST00000550331 IGKV2D-24A0A075B6R9 120 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 A0A087WX48 190 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 BORCS7-ASMTA0A0B4J1R7 106 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 RBFOX3A6NFN3 312 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 FAM74A7A6NL05 159 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 M0R036 132 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 SH2D1AO60880 128 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 PTTG1O95997 202 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 CRIP1P50238 77 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 UBE2G2P60604 165 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 FAM162BQ5T6X4 162 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 FAM74A4Q5TZK3 123 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 RPL7L1Q6DKI1 246 aaKnown RBP4.99□□□□□ -1.61
NEK3-201ENST00000550331 KCNIP4Q6PIL6 250 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 ZFP82Q8N141 532 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 INO80EQ8NBZ0 244 aaPredicted RBP4.99□□□□□ -1.61
NEK3-201ENST00000550331 ZC2HC1AQ96GY0 325 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 CHAC1Q9BUX1 264 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 MED28Q9H204 178 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 KLK12Q9UKR0 248 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 PHLDA3Q9Y5J5 127 aa4.99□□□□□ -1.61
NEK3-201ENST00000550331 TRBV7-3A0A075B6L6 115 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 A0A087WWL8 130 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 TRBV6-1A0A0K0K1D8 114 aa4.98□□□□□ -1.61
NEK3-201ENST00000550331 GIPP09681 153 aaPredicted RBP4.98□□□□□ -1.61
NEK3-201ENST00000550331 TPT1P13693 172 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms