RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 G3V318 75 aa9.21□□□□□ -0.93
VDR-208ENST00000550325 H3BMM0 161 aa9.21□□□□□ -0.93
VDR-208ENST00000550325 TNFRSF13BO14836 293 aaPredicted RBP9.21□□□□□ -0.93
VDR-208ENST00000550325 LINC01620Q4KN68 170 aa9.21□□□□□ -0.93
VDR-208ENST00000550325 UBE2WQ96B02 151 aa9.21□□□□□ -0.93
VDR-208ENST00000550325 NBL1P41271 181 aa9.21□□□□□ -0.94
VDR-208ENST00000550325 FAM57AQ8TBR7 257 aa9.21□□□□□ -0.94
VDR-208ENST00000550325 LRBAP50851 2863 aa9.21□□□□□ -0.94
VDR-208ENST00000550325 SRD5A1P18405 259 aa9.21□□□□□ -0.94
VDR-208ENST00000550325 CRYGDP07320 174 aa9.2□□□□□ -0.94
VDR-208ENST00000550325 SLC25A29Q8N8R3 303 aa9.2□□□□□ -0.94
VDR-208ENST00000550325 OR10J6PQ8NGY7 276 aa9.2□□□□□ -0.94
VDR-208ENST00000550325 SVEP1Q4LDE5 3571 aa9.2□□□□□ -0.94
VDR-208ENST00000550325 IGLV4-69A0A075B6H9 119 aa9.19□□□□□ -0.94
VDR-208ENST00000550325 IGHV3-33P01772 117 aa9.19□□□□□ -0.94
VDR-208ENST00000550325 PAPPA-AS1Q5QFB9 102 aa9.19□□□□□ -0.94
VDR-208ENST00000550325 ZNRF2Q8NHG8 242 aa9.19□□□□□ -0.94
VDR-208ENST00000550325 TRAV21A0A0B4J279 112 aa9.18□□□□□ -0.94
VDR-208ENST00000550325 LINC01560Q8TB33 94 aa9.18□□□□□ -0.94
VDR-208ENST00000550325 CCDC168Q8NDH2 2452 aa9.18□□□□□ -0.94
VDR-208ENST00000550325 LY6LH3BQJ8 138 aa9.18□□□□□ -0.94
VDR-208ENST00000550325 SPXQ9BT56 116 aa9.18□□□□□ -0.94
VDR-208ENST00000550325 RBAKDNA6NC62 111 aa9.18□□□□□ -0.94
VDR-208ENST00000550325 TSHBP01222 138 aa9.18□□□□□ -0.94
VDR-208ENST00000550325 ZNF672Q499Z4 452 aaPredicted RBP9.18□□□□□ -0.94
VDR-208ENST00000550325 CLEC2BQ92478 149 aa9.18□□□□□ -0.94
VDR-208ENST00000550325 ZNF580Q9UK33 172 aa9.18□□□□□ -0.94
VDR-208ENST00000550325 TRAV12-3A0A0B4J271 114 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 FAM110AQ9BQ89 295 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 ANKHD1Q8IWZ3 2542 aaKnown RBP9.17□□□□□ -0.94
VDR-208ENST00000550325 ATP6V0E1O15342 81 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 IGKV3-20P01619 116 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 CD3EP07766 207 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 Q6ZSV7 163 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 IGHV7-81A0A0B4J1V7 117 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 SDHAF1A6NFY7 115 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 IGFL2Q6UWQ7 119 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 NPBQ8NG41 125 aa9.17□□□□□ -0.94
VDR-208ENST00000550325 TMEM95Q3KNT9 176 aa9.16□□□□□ -0.94
VDR-208ENST00000550325 SBSPONQ8IVN8 264 aa9.16□□□□□ -0.94
VDR-208ENST00000550325 C20orf173Q96LM9 149 aa9.16□□□□□ -0.94
VDR-208ENST00000550325 ODF3Q96PU9 254 aa9.16□□□□□ -0.94
VDR-208ENST00000550325 CREBBPQ92793 2442 aa9.16□□□□□ -0.94
VDR-208ENST00000550325 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.16□□□□□ -0.94
VDR-208ENST00000550325 TRIAP1O43715 76 aa9.16□□□□□ -0.94
VDR-208ENST00000550325 RNASE13Q5GAN3 156 aaKnown RBP9.16□□□□□ -0.94
VDR-208ENST00000550325 VMO1Q7Z5L0 202 aa9.16□□□□□ -0.94
VDR-208ENST00000550325 ZFAND3Q9H8U3 227 aa9.16□□□□□ -0.94
VDR-208ENST00000550325 SORL1Q92673 2214 aa9.15□□□□□ -0.94
VDR-208ENST00000550325 COX6CP09669 75 aa9.15□□□□□ -0.94
VDR-208ENST00000550325 TMEM263Q8WUH6 116 aaKnown RBP9.15□□□□□ -0.94
VDR-208ENST00000550325 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.15□□□□□ -0.94
VDR-208ENST00000550325 A0A0J9YXV3 536 aa9.15□□□□□ -0.95
VDR-208ENST00000550325 LY6DQ14210 128 aa9.15□□□□□ -0.95
VDR-208ENST00000550325 PKD1L2Q7Z442 2459 aa9.15□□□□□ -0.95
VDR-208ENST00000550325 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
VDR-208ENST00000550325 VCYO14598 125 aa9.14□□□□□ -0.95
VDR-208ENST00000550325 RPL13AP40429 203 aaKnown RBP9.14□□□□□ -0.95
VDR-208ENST00000550325 C9orf47Q6ZRZ4 202 aa9.14□□□□□ -0.95
VDR-208ENST00000550325 HTN1P15515 57 aa9.14□□□□□ -0.95
VDR-208ENST00000550325 SUMO4Q6EEV6 95 aa9.14□□□□□ -0.95
VDR-208ENST00000550325 EEF1AKMT3Q96AZ1 226 aa9.14□□□□□ -0.95
VDR-208ENST00000550325 CSPG4Q6UVK1 2322 aa9.14□□□□□ -0.95
VDR-208ENST00000550325 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.14□□□□□ -0.95
VDR-208ENST00000550325 CLPSL1A2RUU4 121 aa9.14□□□□□ -0.95
VDR-208ENST00000550325 B9A039 149 aa9.14□□□□□ -0.95
VDR-208ENST00000550325 PPP1R17O96001 155 aa9.14□□□□□ -0.95
VDR-208ENST00000550325 TRBV10-2A0A0K0K1G8 114 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 EIF4EBP3O60516 100 aaPredicted RBP9.13□□□□□ -0.95
VDR-208ENST00000550325 IGHV3-11P01762 117 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 UBE2E1P51965 193 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 IGHV4-4A0A075B6R2 117 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 ID1P41134 155 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 PIP4P1Q86T03 277 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 LINC00477Q96M19 166 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 CCDC140Q96MF4 163 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 LRRK2Q5S007 2527 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 GPHB5Q86YW7 130 aa9.13□□□□□ -0.95
VDR-208ENST00000550325 M0R2P5 195 aa9.12□□□□□ -0.95
VDR-208ENST00000550325 MRPL23Q16540 153 aaKnown RBP9.12□□□□□ -0.95
VDR-208ENST00000550325 TMEM219Q86XT9 240 aa9.12□□□□□ -0.95
VDR-208ENST00000550325 DAND5Q8N907 189 aa9.12□□□□□ -0.95
VDR-208ENST00000550325 LGALS9O00182 355 aa9.12□□□□□ -0.95
VDR-208ENST00000550325 COL27A1Q8IZC6 1860 aaPredicted RBP9.12□□□□□ -0.95
VDR-208ENST00000550325 ASH1LQ9NR48 2969 aaKnown RBP9.12□□□□□ -0.95
VDR-208ENST00000550325 IGHV3OR16-10A0A075B7F0 116 aa9.12□□□□□ -0.95
VDR-208ENST00000550325 RNF223E7ERA6 249 aa9.12□□□□□ -0.95
VDR-208ENST00000550325 ZFAND2AQ8N6M9 145 aa9.12□□□□□ -0.95
VDR-208ENST00000550325 TMEM141Q96I45 108 aa9.12□□□□□ -0.95
VDR-208ENST00000550325 CENPVL3A0A0U1RRI6 287 aa9.12□□□□□ -0.95
VDR-208ENST00000550325 ZNF22P17026 224 aaPredicted RBP9.12□□□□□ -0.95
VDR-208ENST00000550325 DUX5Q96PT3 197 aa9.11□□□□□ -0.95
VDR-208ENST00000550325 A8MZ25 164 aa9.11□□□□□ -0.95
VDR-208ENST00000550325 C9orf153Q5TBE3 101 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms