RNA–Protein interactions for RNA: ENST00000550136.1

PTCH1-220, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 2,388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-220ENST00000550136 C10orf128Q5T292 105 aa7.11□□□□□ -1.27
PTCH1-220ENST00000550136 CCL4L1Q8NHW4 92 aa7.11□□□□□ -1.27
PTCH1-220ENST00000550136 DCANP1Q8TF63 244 aa7.11□□□□□ -1.27
PTCH1-220ENST00000550136 GNG12Q9UBI6 72 aa7.11□□□□□ -1.27
PTCH1-220ENST00000550136 DIDO1Q9BTC0 2240 aaKnown RBP7.1□□□□□ -1.27
PTCH1-220ENST00000550136 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.1□□□□□ -1.27
PTCH1-220ENST00000550136 TMEM223A0PJW6 202 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 CCL21O00585 134 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 FSTL3O95633 263 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 DLX1P56177 255 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 LYZL1Q6UWQ5 148 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 RNF7Q9UBF6 113 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 BUB3O43684 328 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 FAM53AQ6NSI3 398 aaPredicted RBP7.1□□□□□ -1.27
PTCH1-220ENST00000550136 GFRALQ6UXV0 394 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 FAM223AQ8IWN6 122 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 UBALD1Q8TB05 177 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 SLC50A1Q9BRV3 221 aa7.1□□□□□ -1.27
PTCH1-220ENST00000550136 PRRC2CQ9Y520 2896 aaKnown RBP7.09□□□□□ -1.27
PTCH1-220ENST00000550136 NIPBLQ6KC79 2804 aaeCLIP7.09□□□□□ -1.27
PTCH1-220ENST00000550136 IGLV2-18A0A075B6J9 118 aa7.09□□□□□ -1.27
PTCH1-220ENST00000550136 USP17L23D6RBM5 183 aa7.09□□□□□ -1.27
PTCH1-220ENST00000550136 SS18L1O75177 396 aaPredicted RBP7.09□□□□□ -1.27
PTCH1-220ENST00000550136 ORMDL2Q53FV1 153 aa7.09□□□□□ -1.27
PTCH1-220ENST00000550136 Q6ZS46 218 aa7.09□□□□□ -1.27
PTCH1-220ENST00000550136 DAZ4Q86SG3 579 aaKnown RBP7.09□□□□□ -1.27
PTCH1-220ENST00000550136 RNASE6Q93091 150 aaKnown RBP7.09□□□□□ -1.27
PTCH1-220ENST00000550136 DAZ1Q9NQZ3 744 aaKnown RBP7.09□□□□□ -1.27
PTCH1-220ENST00000550136 POLEQ07864 2286 aa7.09□□□□□ -1.27
PTCH1-220ENST00000550136 LST1O00453 97 aa7.09□□□□□ -1.28
PTCH1-220ENST00000550136 SPRY2O43597 315 aa7.09□□□□□ -1.28
PTCH1-220ENST00000550136 IGLV2-11P01706 119 aa7.09□□□□□ -1.28
PTCH1-220ENST00000550136 PRNTQ86SH4 94 aa7.09□□□□□ -1.28
PTCH1-220ENST00000550136 DAND5Q8N907 189 aa7.09□□□□□ -1.28
PTCH1-220ENST00000550136 PRR25Q96S07 402 aa7.09□□□□□ -1.28
PTCH1-220ENST00000550136 TIMM21Q9BVV7 248 aa7.09□□□□□ -1.28
PTCH1-220ENST00000550136 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 PRSS38A1L453 326 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 COX6CP09669 75 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 LAGE3Q14657 143 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 C16orf47Q6ZP98 133 aaPredicted RBP7.08□□□□□ -1.28
PTCH1-220ENST00000550136 MRPL55Q7Z7F7 128 aaKnown RBP7.08□□□□□ -1.28
PTCH1-220ENST00000550136 KLHL30-AS1Q8NEE0 82 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 KRTAP4-6Q9BYQ5 205 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 LAMTOR3Q9UHA4 124 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 RNASE2P10153 161 aaKnown RBP7.08□□□□□ -1.28
PTCH1-220ENST00000550136 HILS1P60008 231 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 SS18Q15532 418 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 PATE1Q8WXA2 126 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 RNF185Q96GF1 192 aa7.08□□□□□ -1.28
PTCH1-220ENST00000550136 FGF23Q9GZV9 251 aaPredicted RBP7.08□□□□□ -1.28
PTCH1-220ENST00000550136 IGHG2P01859 326 aa7.07□□□□□ -1.28
PTCH1-220ENST00000550136 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.07□□□□□ -1.28
PTCH1-220ENST00000550136 PATE2Q6UY27 113 aa7.07□□□□□ -1.28
PTCH1-220ENST00000550136 FDCSPQ8NFU4 85 aa7.07□□□□□ -1.28
PTCH1-220ENST00000550136 Q9H3A6 140 aa7.07□□□□□ -1.28
PTCH1-220ENST00000550136 TRAV3A0A0B4J244 114 aa7.06□□□□□ -1.28
PTCH1-220ENST00000550136 H3BTX0 84 aa7.06□□□□□ -1.28
PTCH1-220ENST00000550136 ICOSQ9Y6W8 199 aa7.06□□□□□ -1.28
PTCH1-220ENST00000550136 FAM223BA6NKX1 122 aa7.06□□□□□ -1.28
PTCH1-220ENST00000550136 H7BZZ5 65 aa7.06□□□□□ -1.28
PTCH1-220ENST00000550136 CFHR3Q02985 330 aa7.06□□□□□ -1.28
PTCH1-220ENST00000550136 FAM27BQ5VT28 67 aa7.06□□□□□ -1.28
PTCH1-220ENST00000550136 Q6JHZ5 121 aa7.06□□□□□ -1.28
PTCH1-220ENST00000550136 NUP37Q8NFH4 326 aa7.06□□□□□ -1.28
PTCH1-220ENST00000550136 WNT9BO14905 357 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 PAX4O43316 350 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 LINC00205P59089 165 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 SNRPD3P62318 126 aaKnown RBP7.05□□□□□ -1.28
PTCH1-220ENST00000550136 IGFL3Q6UXB1 125 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 S1PR3Q99500 378 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 CTSZQ9UBR2 303 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 TIMM17BO60830 172 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 KRTAP10-9P60411 292 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 CIRBPQ14011 172 aaKnown RBP7.05□□□□□ -1.28
PTCH1-220ENST00000550136 LINC00305Q7Z4B0 112 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 NRACQ8N912 160 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 TMEM75Q8N9X5 138 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 ITLN2Q8WWU7 325 aaPredicted RBP7.05□□□□□ -1.28
PTCH1-220ENST00000550136 SRXN1Q9BYN0 137 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 PHPT1Q9NRX4 125 aaPredicted RBP7.05□□□□□ -1.28
PTCH1-220ENST00000550136 TMEM14BQ9NUH8 114 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 LINC00474Q9P2X8 69 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 Q9UF83 564 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 TACC2O95359 2948 aa7.05□□□□□ -1.28
PTCH1-220ENST00000550136 PLAC8L1A1L4L8 177 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 XCL1P47992 114 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 CRIP1P50238 77 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 CD69Q07108 199 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 MSMPQ1L6U9 139 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 C2orf83Q53S99 150 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 LYPD5Q6UWN5 251 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 XCL2Q9UBD3 114 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 USF3Q68DE3 2245 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 RBMY1BA6NDE4 496 aaKnown RBP7.04□□□□□ -1.28
PTCH1-220ENST00000550136 RBMY1EA6NEQ0 496 aaKnown RBP7.04□□□□□ -1.28
PTCH1-220ENST00000550136 GAS8-AS1O95177 125 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 PRSS2P07478 247 aa7.04□□□□□ -1.28
PTCH1-220ENST00000550136 RBMY1DP0C7P1 496 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms