RNA–Protein interactions for RNA: ENST00000549395.1

LETMD1-219, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 475 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-219ENST00000549395 TSPAN13O95857 204 aa4.52□□□□□ -1.69
LETMD1-219ENST00000549395 P01737 135 aa4.52□□□□□ -1.69
LETMD1-219ENST00000549395 VAMP2P63027 116 aa4.52□□□□□ -1.69
LETMD1-219ENST00000549395 UBE2L3P68036 154 aaKnown RBP4.52□□□□□ -1.69
LETMD1-219ENST00000549395 C1orf137Q5JT78 98 aa4.52□□□□□ -1.69
LETMD1-219ENST00000549395 SPANXN2Q5MJ10 180 aa4.52□□□□□ -1.69
LETMD1-219ENST00000549395 NTM-AS1Q6ZSK4 140 aa4.52□□□□□ -1.69
LETMD1-219ENST00000549395 FER1L6-AS1Q8NA97 138 aa4.52□□□□□ -1.69
LETMD1-219ENST00000549395 SUN5Q8TC36 379 aa4.52□□□□□ -1.69
LETMD1-219ENST00000549395 NPCDR1Q9BY65 106 aa4.52□□□□□ -1.69
LETMD1-219ENST00000549395 LINC00474Q9P2X8 69 aa4.52□□□□□ -1.69
LETMD1-219ENST00000549395 MUC17Q685J3 4493 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
LETMD1-219ENST00000549395 MT-ND6P03923 174 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 GZMBP10144 247 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 FAUP35544 74 aaKnown RBP4.51□□□□□ -1.69
LETMD1-219ENST00000549395 SMCPP49901 116 aaPredicted RBP4.51□□□□□ -1.69
LETMD1-219ENST00000549395 GNG5P63218 68 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 CTF1Q16619 201 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 DIRC1Q969H9 104 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 TRIM63Q969Q1 353 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 SLC25A21Q9BQT8 299 aaPredicted RBP4.51□□□□□ -1.69
LETMD1-219ENST00000549395 NDFIP1Q9BT67 221 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 Q9H521 79 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 OTORQ9NRC9 128 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 OR5AC2Q9NZP5 309 aa4.51□□□□□ -1.69
LETMD1-219ENST00000549395 LSM5Q9Y4Y9 91 aaKnown RBP4.51□□□□□ -1.69
LETMD1-219ENST00000549395 TRAV1-1A0A0B4J248 108 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 IGKV3D-20A0A0C4DH25 116 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 H0Y9J4 135 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 H3BVH4 76 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 S100A11P31949 105 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 UBE2D1P51668 147 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 FAM74A1Q5RGS3 127 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 C20orf203Q8NBC4 194 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 NEXN-AS1Q8NBZ9 246 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 OR10G8Q8NGN5 311 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 SFRP2Q96HF1 295 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 NAA50Q9GZZ1 169 aaKnown RBP4.5□□□□□ -1.69
LETMD1-219ENST00000549395 VCX3AQ9NNX9 186 aa4.5□□□□□ -1.69
LETMD1-219ENST00000549395 LYRM2Q9NU23 88 aaPredicted RBP4.5□□□□□ -1.69
LETMD1-219ENST00000549395 IGSF23A1L1A6 192 aa4.49□□□□□ -1.69
LETMD1-219ENST00000549395 EIF3GO75821 320 aaKnown RBP eCLIP4.49□□□□□ -1.69
LETMD1-219ENST00000549395 KRTAP1-4P0C5Y4 121 aa4.49□□□□□ -1.69
LETMD1-219ENST00000549395 SULT1A1P50225 295 aa4.49□□□□□ -1.69
LETMD1-219ENST00000549395 CFAP161Q6P656 301 aa4.49□□□□□ -1.69
LETMD1-219ENST00000549395 OR11H4Q8NGC9 324 aa4.49□□□□□ -1.69
LETMD1-219ENST00000549395 THAP6Q8TBB0 222 aa4.49□□□□□ -1.69
LETMD1-219ENST00000549395 MITD1Q8WV92 249 aa4.49□□□□□ -1.69
LETMD1-219ENST00000549395 CDIP1Q9H305 208 aa4.49□□□□□ -1.69
LETMD1-219ENST00000549395 IL36BQ9NZH7 164 aa4.49□□□□□ -1.69
LETMD1-219ENST00000549395 MBD2Q9UBB5 411 aa4.49□□□□□ -1.69
LETMD1-219ENST00000549395 IGLV4-60A0A075B6I1 120 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 TRBV25-1A0A075B6N4 114 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 A0A1W2PNN7 141 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 GAGE12HA6NDE8 117 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 M0R381 172 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 IGLV7-43P04211 117 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 ARMS2P0C7Q2 107 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 RAB2AP61019 212 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 HBG1P69891 147 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 HBG2P69892 147 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 ZFP69Q49AA0 526 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 SMUG1Q53HV7 270 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 TOMM5Q8N4H5 51 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 ARL6IP6Q8N6S5 226 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.48□□□□□ -1.69
LETMD1-219ENST00000549395 DERL1Q9BUN8 251 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 C11orf1Q9H5F2 150 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 RSL24D1Q9UHA3 163 aaKnown RBP4.48□□□□□ -1.69
LETMD1-219ENST00000549395 PSG8Q9UQ74 426 aa4.48□□□□□ -1.69
LETMD1-219ENST00000549395 A0A087WXM4 84 aa4.47□□□□□ -1.69
LETMD1-219ENST00000549395 RPL13AP40429 203 aaKnown RBP4.47□□□□□ -1.69
LETMD1-219ENST00000549395 AMTP48728 403 aa4.47□□□□□ -1.69
LETMD1-219ENST00000549395 CYCSP99999 105 aaKnown RBP4.47□□□□□ -1.69
LETMD1-219ENST00000549395 ATP6V1FQ16864 119 aa4.47□□□□□ -1.69
LETMD1-219ENST00000549395 ANKRD39Q53RE8 183 aa4.47□□□□□ -1.69
LETMD1-219ENST00000549395 KHDC3LQ587J8 217 aa4.47□□□□□ -1.69
LETMD1-219ENST00000549395 TMEM97Q5BJF2 176 aa4.47□□□□□ -1.69
LETMD1-219ENST00000549395 TMEM252Q8N6L7 170 aa4.47□□□□□ -1.69
LETMD1-219ENST00000549395 FLVCR2Q9UPI3 526 aa4.47□□□□□ -1.69
LETMD1-219ENST00000549395 PHLDA3Q9Y5J5 127 aa4.47□□□□□ -1.69
LETMD1-219ENST00000549395 GVQW2A0A096LPI5 108 aaPredicted RBP4.46□□□□□ -1.7
LETMD1-219ENST00000549395 TRBV6-1A0A0K0K1D8 114 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 GRIFINA4D1Z8 144 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 B4DEV8 164 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 SULT1A2P50226 295 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 PTTG1IPP53801 180 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 AP3S2P59780 193 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 RAB4BP61018 213 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 GAGE2BQ13066 116 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 ZNF56Q15929 161 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 IQCJQ1A5X6 159 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 PRR27Q6MZM9 219 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 PHF5AQ7RTV0 110 aaKnown RBP4.46□□□□□ -1.7
LETMD1-219ENST00000549395 PRNTQ86SH4 94 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 STX12Q86Y82 276 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 LINC00526Q96FQ7 95 aa4.46□□□□□ -1.7
LETMD1-219ENST00000549395 RETNLBQ9BQ08 111 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms