RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 UBE2CO00762 179 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 SNAI2O43623 268 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 INSP01308 110 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 ARMS2P0C7Q2 107 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 Q0VG73 95 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 SPINK13Q1W4C9 94 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 ANXA2RQ3ZCQ2 193 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 DNLZQ5SXM8 178 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 GDF5OSQ5U4N7 250 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 ZNF493Q6ZR52 646 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 TMEM256Q8N2U0 113 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 C1QTNF4Q9BXJ3 329 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 CNFNQ9BYD5 112 aa5.19□□□□□ -1.58
DEPDC4-208ENST00000549341 DNAH2Q9P225 4427 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 IGHV1OR15-1A0A075B7D0 117 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 LOC105371267A0A1B0GV96 52 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 PHOX2AO14813 284 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 PPBPP02775 128 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 CD7P09564 240 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 SMIM17P0DL12 118 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 NTF3P20783 257 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 SRIP30626 198 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 AKR1D1P51857 326 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 DEFB1P60022 68 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 TDRG1Q3Y452 100 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 COA6Q5JTJ3 125 aaKnown RBP5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 MUC21Q5SSG8 566 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 GFI1BQ5VTD9 330 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 MORN3Q6PF18 240 aaPredicted RBP5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 TMEM18Q96B42 140 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 TMEM208Q9BTX3 173 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 TMEM191AQ9H0A3 160 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 WFDC10AQ9H1F0 79 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 TIMM8BQ9Y5J9 83 aaPredicted RBP5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 FAT2Q9NYQ8 4349 aa5.18□□□□□ -1.58
DEPDC4-208ENST00000549341 IGHV4-4A0A075B6R2 117 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 LOC102724200A0A096LPH7 203 aaPredicted RBP5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 CBY3A6NI87 242 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 H3BVH4 76 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 M0R2Z0 102 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 ZNF324O75467 553 aaPredicted RBP5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 PPP1R17O96001 155 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 CKS2P33552 79 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 ZNF415Q09FC8 603 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 KIAA1644Q3SXP7 199 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 PRR9Q5T870 116 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 FAM104BQ5XKR9 115 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 CEMP1Q6PRD7 247 aaPredicted RBP5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 ORMDL3Q8N138 153 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 AP1S3Q96PC3 154 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 SAMD10Q9BYL1 202 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 LAMTOR2Q9Y2Q5 125 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 KLK5Q9Y337 293 aaPredicted RBP5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 GOLT1BQ9Y3E0 138 aa5.17□□□□□ -1.58
DEPDC4-208ENST00000549341 TRAV12-2A0A075B6T6 113 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 A0A0J9YWU9 116 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 RAB4AP20338 218 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 PMCHP20382 165 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 SSTP61278 116 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 SLAQ13239 276 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 ODF3L2Q3SX64 289 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 AMTNQ6UX39 209 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 TRPT1Q86TN4 253 aaKnown RBP5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 DEFB125Q8N687 156 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 LINC01587Q99440 93 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 LINC00467Q9BRT7 94 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 ALKBH7Q9BT30 221 aaPredicted RBP5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 DPH3P1Q9H4G8 78 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 C11orf21Q9P2W6 132 aa5.16□□□□□ -1.58
DEPDC4-208ENST00000549341 DMBT1Q9UGM3 2413 aaPredicted RBP5.15□□□□□ -1.58
DEPDC4-208ENST00000549341 M0R381 172 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 GNRH2O43555 120 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 HSBP1O75506 76 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 FXYD7P58549 80 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 FA2HQ7L5A8 372 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 HIST3H2BBQ8N257 126 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 OR10AG1Q8NH19 301 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 PRSS3P2Q8NHM4 247 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 CHCHD1Q96BP2 118 aaKnown RBP5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 MRAP2Q96G30 205 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 PACRGQ96M98 296 aaPredicted RBP5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 PRELID3AQ96N28 172 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 SPXQ9BT56 116 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 MAP1LC3AQ9H492 121 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 SCRT2Q9NQ03 307 aa5.15□□□□□ -1.59
DEPDC4-208ENST00000549341 HSPG2P98160 4391 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 IGHV3-16A0A0C4DH30 117 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 MUC21A0A0G2JKD1 596 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 MUC21A0A140T8X8 626 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 ESDP10768 282 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 MRPL51Q4U2R6 128 aaKnown RBP5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 PDZD11Q5EBL8 140 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 PIK3CD-AS1Q5SR53 167 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 LGALS9CQ6DKI2 356 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 AMN1Q8IY45 258 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 C18orf32Q8TCD1 76 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 NDUFAF3Q9BU61 184 aa5.14□□□□□ -1.59
DEPDC4-208ENST00000549341 A8MWV9 139 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 D6R8Y8 96 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 M0R2P5 195 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms