RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 UBE2CO00762 179 aa5.81□□□□□ -1.48
DEPDC4-207ENST00000549249 MT-ND6P03923 174 aa5.81□□□□□ -1.48
DEPDC4-207ENST00000549249 EVI2AP22794 236 aa5.81□□□□□ -1.48
DEPDC4-207ENST00000549249 AMN1Q8IY45 258 aa5.81□□□□□ -1.48
DEPDC4-207ENST00000549249 ZFP82Q8N141 532 aa5.81□□□□□ -1.48
DEPDC4-207ENST00000549249 FRZBQ92765 325 aa5.81□□□□□ -1.48
DEPDC4-207ENST00000549249 RCHY1Q96PM5 261 aa5.81□□□□□ -1.48
DEPDC4-207ENST00000549249 TMA7Q9Y2S6 64 aaKnown RBP5.81□□□□□ -1.48
DEPDC4-207ENST00000549249 C1orf196B1AJZ1 125 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 M0R2P5 195 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 APCSP02743 223 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 S100A8P05109 93 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 TRGC1P0CF51 173 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 LINC00310P59036 64 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 LINC00315P59091 139 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 RRN3P1Q2M238 152 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 FAM104BQ5XKR9 115 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 Q6ZWC4 215 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 PTH2Q96A98 100 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 RNF183Q96D59 192 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 C16orf74Q96GX8 76 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 TMEM191AQ9H0A3 160 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 RETNQ9HD89 108 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 MRPL16Q9NX20 251 aaKnown RBP5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 KIF25-AS1Q9Y6Z4 181 aa5.8□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST1H2BKO60814 126 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 GAS8-AS1O95177 125 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST1H2BJP06899 126 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 CRYGDP07320 174 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 RAB4AP20338 218 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST1H2BOP23527 126 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST1H2BBP33778 126 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST1H2BDP58876 126 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST1H2BCP62807 126 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 DAZ2Q13117 558 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST2H2BEQ16778 126 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 ZNF876PQ49A33 203 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 MRPL51Q4U2R6 128 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 Q8NAQ8 132 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 SYT8Q8NBV8 401 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 OR11H2Q8NH07 326 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST1H2BHQ93079 126 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 AP1S3Q96PC3 154 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST1H2BNQ99877 126 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 HIST1H2BMQ99879 126 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 OVOL2Q9BRP0 275 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 SPXQ9BT56 116 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 SAMD10Q9BYL1 202 aa5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 NOP10Q9NPE3 64 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-207ENST00000549249 A0A087WWL8 130 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 IGHV4-28A0A0C4DH34 117 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 SMIM9A6NGZ8 99 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 SMKR1H3BMG3 65 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 PIK3CD-AS1Q5SR53 167 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 UFSP1Q6NVU6 142 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 Q6ZTI0 123 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 SBSPONQ8IVN8 264 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 C14orf178Q8N769 122 aaPredicted RBP5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 POM121L12Q8N7R1 296 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 RASL10AQ92737 203 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 DPH3P1Q9H4G8 78 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 U3KQK5 164 aa5.78□□□□□ -1.48
DEPDC4-207ENST00000549249 TRGV1A0A0A0MS02 117 aa5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 TRAV26-2A0A0B4J265 109 aa5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 D6R8Y8 96 aa5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 RS1O15537 224 aa5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 NCR2O95944 276 aa5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 MGPP08493 103 aa5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 GATA1P15976 413 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 SRIP30626 198 aa5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 RAB5BP61020 215 aa5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 MRAPQ8TCY5 172 aa5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 ALKBH7Q9BT30 221 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 TP53TG1Q9Y2A0 90 aa5.77□□□□□ -1.49
DEPDC4-207ENST00000549249 DEFB4AO15263 64 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 MIFP14174 115 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 EMP1P54849 157 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 IQCJQ1A5X6 159 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 LGALS9BQ3B8N2 356 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 FAM74A4Q5TZK3 123 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 CFAP126Q5VTH2 177 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 SMIM15Q7Z3B0 74 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 LINC00612Q8N6U2 182 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 C18orf32Q8TCD1 76 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 NDUFAF3Q9BU61 184 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 CELA1Q9UNI1 258 aa5.76□□□□□ -1.49
DEPDC4-207ENST00000549249 IGHV3-73A0A0B4J1V6 119 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 GAGE12BA1L429 117 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 A8MWV9 139 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 GAGE7O76087 117 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 NPYP01303 97 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 GAGE12FP0CL80 117 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 GAGE12GP0CL81 117 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 GAGE12IP0CL82 117 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 DEFB121Q5J5C9 76 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 SUMO4Q6EEV6 95 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 Q6ZSN1 163 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 ORMDL3Q8N138 153 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 NRACQ8N912 160 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms