RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 TCEAL7Q9BRU2 100 aa13.07□□□□□ -0.32
SLC48A1-207ENST00000549243 IGLV5-52A0A0A0MRZ9 124 aa13.06□□□□□ -0.32
SLC48A1-207ENST00000549243 TRBV6-1A0A0K0K1D8 114 aa13.06□□□□□ -0.32
SLC48A1-207ENST00000549243 RHODO00212 210 aa13.06□□□□□ -0.32
SLC48A1-207ENST00000549243 LINC01559Q495D7 138 aa13.06□□□□□ -0.32
SLC48A1-207ENST00000549243 ZNF471Q9BX82 626 aaPredicted RBP13.06□□□□□ -0.32
SLC48A1-207ENST00000549243 SEC11BP0C7V7 166 aa13.05□□□□□ -0.32
SLC48A1-207ENST00000549243 SFRP2Q96HF1 295 aa13.05□□□□□ -0.32
SLC48A1-207ENST00000549243 SCO2A0A1W2PP80 73 aa13.04□□□□□ -0.32
SLC48A1-207ENST00000549243 HAMPP81172 84 aa13.04□□□□□ -0.32
SLC48A1-207ENST00000549243 DAZ4Q86SG3 579 aaKnown RBP13.04□□□□□ -0.32
SLC48A1-207ENST00000549243 Q8N814 137 aa13.04□□□□□ -0.32
SLC48A1-207ENST00000549243 MBD3L1Q8WWY6 194 aa13.04□□□□□ -0.32
SLC48A1-207ENST00000549243 DAZ3Q9NR90 486 aaKnown RBP13.04□□□□□ -0.32
SLC48A1-207ENST00000549243 KANTRA0A1W2PQU2 76 aa13.03□□□□□ -0.32
SLC48A1-207ENST00000549243 HMSDA8MTL9 139 aa13.03□□□□□ -0.32
SLC48A1-207ENST00000549243 UMAD1C9J7I0 102 aa13.03□□□□□ -0.32
SLC48A1-207ENST00000549243 BCL2L11O43521 198 aa13.03□□□□□ -0.32
SLC48A1-207ENST00000549243 LAGE3Q14657 143 aa13.03□□□□□ -0.32
SLC48A1-207ENST00000549243 A0A0D9SG52 128 aa13.02□□□□□ -0.33
SLC48A1-207ENST00000549243 RPL19P84098 196 aaKnown RBP13.02□□□□□ -0.33
SLC48A1-207ENST00000549243 ZFP82Q8N141 532 aa13.02□□□□□ -0.33
SLC48A1-207ENST00000549243 A0A087WWC5 75 aa13.01□□□□□ -0.33
SLC48A1-207ENST00000549243 PFDN1O60925 122 aa13.01□□□□□ -0.33
SLC48A1-207ENST00000549243 SMR3BP02814 79 aaPredicted RBP13.01□□□□□ -0.33
SLC48A1-207ENST00000549243 WFDC2Q14508 124 aa13.01□□□□□ -0.33
SLC48A1-207ENST00000549243 NTN5Q8WTR8 489 aaPredicted RBP13.01□□□□□ -0.33
SLC48A1-207ENST00000549243 TM2D2Q9BX73 214 aa13.01□□□□□ -0.33
SLC48A1-207ENST00000549243 LECT2O14960 151 aa13□□□□□ -0.33
SLC48A1-207ENST00000549243 H2AFB1P0C5Y9 115 aa13□□□□□ -0.33
SLC48A1-207ENST00000549243 Q5VSD8 79 aa13□□□□□ -0.33
SLC48A1-207ENST00000549243 FAT1Q14517 4588 aa13□□□□□ -0.33
SLC48A1-207ENST00000549243 TRAV8-3A0A0A6YYJ7 113 aa12.99□□□□□ -0.33
SLC48A1-207ENST00000549243 S100A9P06702 114 aaKnown RBP12.99□□□□□ -0.33
SLC48A1-207ENST00000549243 PRR27Q6MZM9 219 aa12.99□□□□□ -0.33
SLC48A1-207ENST00000549243 BAGE2Q86Y30 109 aa12.99□□□□□ -0.33
SLC48A1-207ENST00000549243 FRZBQ92765 325 aa12.99□□□□□ -0.33
SLC48A1-207ENST00000549243 URGCP-MRPS24S4R325 110 aa12.99□□□□□ -0.33
SLC48A1-207ENST00000549243 MUC21A0A0G2JKD1 596 aa12.98□□□□□ -0.33
SLC48A1-207ENST00000549243 MUC21A0A140T8X8 626 aa12.98□□□□□ -0.33
SLC48A1-207ENST00000549243 TMUB2Q71RG4 321 aa12.98□□□□□ -0.33
SLC48A1-207ENST00000549243 OR10AG1Q8NH19 301 aa12.98□□□□□ -0.33
SLC48A1-207ENST00000549243 EIF5AP63241 154 aaKnown RBP12.97□□□□□ -0.33
SLC48A1-207ENST00000549243 RPL36AP83881 106 aaKnown RBP12.97□□□□□ -0.33
SLC48A1-207ENST00000549243 TOR2AQ5JU69 321 aa12.97□□□□□ -0.33
SLC48A1-207ENST00000549243 NIT1Q86X76 327 aa12.97□□□□□ -0.33
SLC48A1-207ENST00000549243 RPL36ALQ969Q0 106 aaKnown RBP12.97□□□□□ -0.33
SLC48A1-207ENST00000549243 DNAJC30Q96LL9 226 aa12.97□□□□□ -0.33
SLC48A1-207ENST00000549243 MLST8Q9BVC4 326 aa12.97□□□□□ -0.33
SLC48A1-207ENST00000549243 INAFM2P0DMQ5 153 aa12.96□□□□□ -0.33
SLC48A1-207ENST00000549243 SSTP61278 116 aa12.96□□□□□ -0.33
SLC48A1-207ENST00000549243 ZNF56Q15929 161 aa12.96□□□□□ -0.33
SLC48A1-207ENST00000549243 TRBV10-1A0A0K0K1A3 114 aa12.95□□□□□ -0.34
SLC48A1-207ENST00000549243 UBE2D3P61077 147 aa12.95□□□□□ -0.34
SLC48A1-207ENST00000549243 UBE2D2P62837 147 aa12.95□□□□□ -0.34
SLC48A1-207ENST00000549243 CCL20P78556 96 aa12.95□□□□□ -0.34
SLC48A1-207ENST00000549243 TMEM70Q9BUB7 260 aa12.95□□□□□ -0.34
SLC48A1-207ENST00000549243 GNG13Q9P2W3 67 aa12.95□□□□□ -0.34
SLC48A1-207ENST00000549243 KLK12Q9UKR0 248 aa12.95□□□□□ -0.34
SLC48A1-207ENST00000549243 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.94□□□□□ -0.34
SLC48A1-207ENST00000549243 TRBV7-3A0A075B6L6 115 aa12.94□□□□□ -0.34
SLC48A1-207ENST00000549243 RPL35P42766 123 aaKnown RBP12.94□□□□□ -0.34
SLC48A1-207ENST00000549243 BAALCQ8WXS3 180 aa12.94□□□□□ -0.34
SLC48A1-207ENST00000549243 DERL1Q9BUN8 251 aa12.94□□□□□ -0.34
SLC48A1-207ENST00000549243 FAM30AQ9NZY2 134 aa12.94□□□□□ -0.34
SLC48A1-207ENST00000549243 A0A087WX48 190 aa12.93□□□□□ -0.34
SLC48A1-207ENST00000549243 CXCL1P09341 107 aa12.93□□□□□ -0.34
SLC48A1-207ENST00000549243 RAB4BP61018 213 aa12.93□□□□□ -0.34
SLC48A1-207ENST00000549243 SPANXN1Q5VSR9 72 aa12.93□□□□□ -0.34
SLC48A1-207ENST00000549243 IGKV2D-24A0A075B6R9 120 aa12.92□□□□□ -0.34
SLC48A1-207ENST00000549243 SNAI2O43623 268 aa12.92□□□□□ -0.34
SLC48A1-207ENST00000549243 NEXN-AS1Q8NBZ9 246 aa12.92□□□□□ -0.34
SLC48A1-207ENST00000549243 UBE2WQ96B02 151 aa12.92□□□□□ -0.34
SLC48A1-207ENST00000549243 RMI2Q96E14 147 aa12.92□□□□□ -0.34
SLC48A1-207ENST00000549243 MANBALQ9NQG1 85 aa12.92□□□□□ -0.34
SLC48A1-207ENST00000549243 FLG2Q5D862 2391 aaPredicted RBP12.92□□□□□ -0.34
SLC48A1-207ENST00000549243 F5H697 171 aa12.91□□□□□ -0.34
SLC48A1-207ENST00000549243 KCNIP4Q6PIL6 250 aa12.91□□□□□ -0.34
SLC48A1-207ENST00000549243 OR10G8Q8NGN5 311 aa12.91□□□□□ -0.34
SLC48A1-207ENST00000549243 SSBP4Q9BWG4 385 aaPredicted RBP12.91□□□□□ -0.34
SLC48A1-207ENST00000549243 COX11Q9Y6N1 276 aa12.91□□□□□ -0.34
SLC48A1-207ENST00000549243 VPS13BQ7Z7G8 4022 aa12.91□□□□□ -0.34
SLC48A1-207ENST00000549243 SRRM2Q9UQ35 2752 aaKnown RBP12.9□□□□□ -0.34
SLC48A1-207ENST00000549243 TMEM262E9PQX1 116 aa12.9□□□□□ -0.34
SLC48A1-207ENST00000549243 OR5AL1P0C617 328 aa12.9□□□□□ -0.34
SLC48A1-207ENST00000549243 FAM229AH3BQW9 127 aa12.89□□□□□ -0.35
SLC48A1-207ENST00000549243 LINC01620Q4KN68 170 aa12.89□□□□□ -0.35
SLC48A1-207ENST00000549243 CENPWQ5EE01 88 aa12.89□□□□□ -0.35
SLC48A1-207ENST00000549243 C11orf52Q96A22 123 aa12.89□□□□□ -0.35
SLC48A1-207ENST00000549243 CHCHD7Q9BUK0 85 aa12.89□□□□□ -0.35
SLC48A1-207ENST00000549243 DMBT1Q9UGM3 2413 aaPredicted RBP12.89□□□□□ -0.35
SLC48A1-207ENST00000549243 DNAH8Q96JB1 4490 aa12.88□□□□□ -0.35
SLC48A1-207ENST00000549243 TRBV6-8A0A0A6YYG3 113 aa12.88□□□□□ -0.35
SLC48A1-207ENST00000549243 GZMBP10144 247 aa12.88□□□□□ -0.35
SLC48A1-207ENST00000549243 ELOBQ15370 118 aa12.88□□□□□ -0.35
SLC48A1-207ENST00000549243 TPPP3Q9BW30 176 aa12.88□□□□□ -0.35
SLC48A1-207ENST00000549243 TRAV1-1A0A0B4J248 108 aa12.87□□□□□ -0.35
SLC48A1-207ENST00000549243 RBFOX3A6NFN3 312 aa12.87□□□□□ -0.35
SLC48A1-207ENST00000549243 SMIM17P0DL12 118 aa12.87□□□□□ -0.35
SLC48A1-207ENST00000549243 RAB19A4D1S5 217 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms