RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 NMUP48645 174 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 MRPS16Q9Y3D3 137 aaKnown RBP3.41□□□□□ -1.86
SCAF11-212ENST00000549162 CACNA1DQ01668 2161 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 HSPG2P98160 4391 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 RPS10P46783 165 aaKnown RBP3.41□□□□□ -1.86
SCAF11-212ENST00000549162 TMEM78Q5T7P6 136 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 CFAP126Q5VTH2 177 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 RNASE11Q8TAA1 199 aaKnown RBP3.41□□□□□ -1.86
SCAF11-212ENST00000549162 GPR179Q6PRD1 2367 aa3.41□□□□□ -1.86
SCAF11-212ENST00000549162 UNC79Q9P2D8 2635 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 H7C1H1 209 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 PYYP10082 97 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 NUTF2P61970 127 aaKnown RBP3.4□□□□□ -1.86
SCAF11-212ENST00000549162 C2orf82Q6UX34 121 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 BAGE3Q86Y29 109 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 OR11H1Q8NG94 326 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 GATCO43716 136 aaKnown RBP3.4□□□□□ -1.86
SCAF11-212ENST00000549162 DEFA4P12838 97 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 FCER1GP30273 86 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 KRTAP10-11P60412 298 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 SRSF9Q13242 221 aaKnown RBP eCLIP3.4□□□□□ -1.86
SCAF11-212ENST00000549162 ORMDL2Q53FV1 153 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 TMEM61Q8N0U2 210 aa3.4□□□□□ -1.86
SCAF11-212ENST00000549162 APCP25054 2843 aa3.4□□□□□ -1.87
SCAF11-212ENST00000549162 C11orf86A6NJI1 115 aa3.4□□□□□ -1.87
SCAF11-212ENST00000549162 RPL24P83731 157 aaKnown RBP3.4□□□□□ -1.87
SCAF11-212ENST00000549162 JOSD1Q15040 202 aaPredicted RBP3.4□□□□□ -1.87
SCAF11-212ENST00000549162 C18orf32Q8TCD1 76 aa3.4□□□□□ -1.87
SCAF11-212ENST00000549162 TRBV7-6A0A0J9YX20 115 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 NCBP2LA6PVI3 153 aaKnown RBP3.39□□□□□ -1.87
SCAF11-212ENST00000549162 PRAC2D3DTV9 90 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HSBP1O75506 76 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 GAGE7O76087 117 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 GAGE12FP0CL80 117 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 GAGE12GP0CL81 117 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 GAGE12IP0CL82 117 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 GAGE1Q13065 139 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 GAGE4Q13068 117 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 FHL2Q14192 279 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 FAM24BQ8N5W8 94 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 FER1L6-AS1Q8NA97 138 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 GNG13Q9P2W3 67 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 SDHAF1A6NFY7 115 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST1H2BKO60814 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST1H2BJP06899 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST1H2BOP23527 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 S100PP25815 95 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST1H2BBP33778 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 ASIPP42127 132 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST1H2BDP58876 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST1H2BCP62807 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 PLECQ15149 4684 aaKnown RBP3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST2H2BEQ16778 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.39□□□□□ -1.87
SCAF11-212ENST00000549162 LINC00336Q6ZUF6 198 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST1H2BHQ93079 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST1H2BNQ99877 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 HIST1H2BMQ99879 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 KLK5Q9Y337 293 aaPredicted RBP3.39□□□□□ -1.87
SCAF11-212ENST00000549162 GOLT1BQ9Y3E0 138 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 V9GYY9 64 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 MYO18BQ8IUG5 2567 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 MAP1BP46821 2468 aaKnown RBP3.39□□□□□ -1.87
SCAF11-212ENST00000549162 IGKV2-40A0A087WW87 121 aaPredicted RBP3.39□□□□□ -1.87
SCAF11-212ENST00000549162 TINCRA0A1B0GVN0 87 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 CDK2AP2O75956 126 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 IGKV2D-40P01614 121 aaPredicted RBP3.39□□□□□ -1.87
SCAF11-212ENST00000549162 LYZP61626 148 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 AP1S3Q96PC3 154 aa3.39□□□□□ -1.87
SCAF11-212ENST00000549162 IGLV9-49A0A0B4J1Y8 123 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 TSHBP01222 138 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 P01737 135 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 BLNKQ8WV28 456 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 OR11H12B2RN74 326 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 LINC00173Q6ZV60 143 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 NEGR1Q7Z3B1 354 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 OR5T1Q8NG75 326 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 C2orf48Q96LS8 159 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 DCHS2Q6V1P9 2916 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 CACNA1HO95180 2353 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 CELSR3Q9NYQ7 3312 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 FAT1Q14517 4588 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 INAFM1C9JVW0 142 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 AMTP48728 403 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 ZNF876PQ49A33 203 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 KLHL30-AS1Q8NEE0 82 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 IGHV3-72A0A0B4J1Y9 119 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 COX17Q14061 63 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 LINC01556Q5JQF7 62 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 SUMO4Q6EEV6 95 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 EBLN2Q6P2I7 272 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 FAM218AQ96MZ4 157 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 Q9HAA7 133 aa3.38□□□□□ -1.87
SCAF11-212ENST00000549162 CELSR1Q9NYQ6 3014 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 OXTP01178 125 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 LINC00167Q96N53 147 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 NIT2Q9NQR4 276 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 HIVEP3Q5T1R4 2406 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 NBEAQ8NFP9 2946 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 CRYBA1P05813 215 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms