RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 CDKN1BP46527 198 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 ZNF80P51504 273 aaPredicted RBP1.24□□□□□ -2.21
LGR5-205ENST00000549015 RIPPLY3P57055 190 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 BLCAPP62952 87 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 HSD52Q0P140 79 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 SMAGPQ0VAQ4 97 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 GAGE5Q13069 117 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 GAGE6Q13070 117 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 LAGE3Q14657 143 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 RHOHQ15669 191 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 LY6EQ16553 131 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 TAL2Q16559 108 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 DEFB112Q30KQ8 113 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 NSUN5P1Q3KNT7 163 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 TMEM97Q5BJF2 176 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 FAM19A2Q8N3H0 131 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 RNF182Q8N6D2 247 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 ORAOV1Q8WV07 137 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 TOMM6Q96B49 74 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 IFI27L1Q96BM0 104 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 TMEM141Q96I45 108 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 C9orf85Q96MD7 179 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 TIMM17AQ99595 171 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 KIR2DL4Q99706 377 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 C16orf95Q9H693 158 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 GOLT1BQ9Y3E0 138 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 SELENOKQ9Y6D0 94 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 S4R3C0 116 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 ROS1P08922 2347 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 KALRNO60229 2985 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 TNCP24821 2201 aa1.24□□□□□ -2.21
LGR5-205ENST00000549015 HEATR1Q9H583 2144 aaKnown RBP1.24□□□□□ -2.21
LGR5-205ENST00000549015 ZZEF1O43149 2961 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 DSPP15924 2871 aaKnown RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 IGHV1OR15-1A0A075B7D0 117 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 IGHV3OR16-10A0A075B7F0 116 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 A0A087WX48 190 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 A0A087WZ39 114 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 IGHV3-16A0A0C4DH30 117 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 IGHV3-35A0A0C4DH35 117 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 TRBV10-1A0A0K0K1A3 114 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 A0A1B0GV90 55 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 C11orf86A6NJI1 115 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 OR11H12B2RN74 326 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 ZNF207O43670 478 aaKnown RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 CD5LO43866 347 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 SAP30O75446 220 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 NDUFA7O95182 113 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 NCR2O95944 276 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 INSP01308 110 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 TRBV12-3P01733 135 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 IGHV3-11P01762 117 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 IGKCP01834 107 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 RNF224P0DH78 156 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 FGF6P10767 208 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 RNASE3P12724 160 aaKnown RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 RPL35AP18077 110 aaKnown RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 HLA-DMBP28068 263 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 RNASE4P34096 147 aaKnown RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 POLR2KP53803 58 aaKnown RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 LINC00315P59091 139 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 HERVK_113P61574 105 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 ERCC8Q13216 396 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 TCTEX1D4Q5JR98 221 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 BVES-AS1Q5T3Y7 98 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 PRR9Q5T870 116 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 LYRM7Q5U5X0 104 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 MORN3Q6PF18 240 aaPredicted RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 AMTNQ6UX39 209 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 ZFP2Q6ZN57 461 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 GTF2H5Q6ZYL4 71 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 TRPT1Q86TN4 253 aaKnown RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 ZNF575Q86XF7 245 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 ZGRF1Q86YA3 2104 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 OR11H1Q8NG94 326 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 OR5A1Q8NGJ0 315 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 OR11H2Q8NH07 326 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 ZNF418Q8TF45 676 aaPredicted RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 TMEM158Q8WZ71 300 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 RPL36ALQ969Q0 106 aaKnown RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 DNAJC30Q96LL9 226 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 TMEM208Q9BTX3 173 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 C1QTNF4Q9BXJ3 329 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 PPDPFQ9H3Y8 114 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 CYSLTR1Q9Y271 337 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 COX11Q9Y6N1 276 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 KIF25-AS1Q9Y6Z4 181 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 EPG5Q9HCE0 2579 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 ABCA4P78363 2273 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 SPTAN1Q13813 2472 aaKnown RBP1.23□□□□□ -2.21
LGR5-205ENST00000549015 FLNCQ14315 2725 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 RELNP78509 3460 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 ABCA2Q9BZC7 2435 aa1.23□□□□□ -2.21
LGR5-205ENST00000549015 NBASA2RRP1 2371 aa1.22□□□□□ -2.21
LGR5-205ENST00000549015 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.22□□□□□ -2.215e-8■■■■□ 26.6
LGR5-205ENST00000549015 DOCK11Q5JSL3 2073 aa1.22□□□□□ -2.21
LGR5-205ENST00000549015 ZFYVE26Q68DK2 2539 aa1.22□□□□□ -2.21
LGR5-205ENST00000549015 PTPN13Q12923 2485 aa1.22□□□□□ -2.21
LGR5-205ENST00000549015 IGHV3OR16-13A0A075B7E8 117 aa1.22□□□□□ -2.21
LGR5-205ENST00000549015 IGHV3OR16-8A0A075B7F1 116 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms