RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 CRYGDP07320 174 aa12.1□□□□□ -0.47
KRT4-201ENST00000548097 KCNIP4Q6PIL6 250 aa12.1□□□□□ -0.47
KRT4-201ENST00000548097 IMMP2LQ96T52 175 aa12.1□□□□□ -0.47
KRT4-201ENST00000548097 TRAV4A0A0B4J268 109 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 TGIF2-C20orf24A0A0A6YYL0 155 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 A8MWV9 139 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 F5H768 121 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 ATP5G1P05496 136 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 S100PP25815 95 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 RIGQ13278 110 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 WDR73Q6P4I2 378 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 Q6ZSN1 163 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 AP1S3Q96PC3 154 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 DNAH7Q8WXX0 4024 aa12.09□□□□□ -0.47
KRT4-201ENST00000548097 MGPP08493 103 aa12.08□□□□□ -0.48
KRT4-201ENST00000548097 ELOBQ15370 118 aa12.08□□□□□ -0.48
KRT4-201ENST00000548097 UFSP1Q6NVU6 142 aa12.08□□□□□ -0.48
KRT4-201ENST00000548097 BTF3L4Q96K17 158 aa12.08□□□□□ -0.48
KRT4-201ENST00000548097 C18orf15Q96N68 181 aa12.08□□□□□ -0.48
KRT4-201ENST00000548097 KIF25-AS1Q9Y6Z4 181 aa12.08□□□□□ -0.48
KRT4-201ENST00000548097 CSMD3Q7Z407 3707 aa12.07□□□□□ -0.48
KRT4-201ENST00000548097 A0A1B0GXF2 115 aa12.07□□□□□ -0.48
KRT4-201ENST00000548097 FHL2Q14192 279 aa12.07□□□□□ -0.48
KRT4-201ENST00000548097 PIK3CD-AS1Q5SR53 167 aa12.07□□□□□ -0.48
KRT4-201ENST00000548097 LINC00518Q8N0U6 118 aa12.07□□□□□ -0.48
KRT4-201ENST00000548097 DEFB131BA0A096LNP1 70 aa12.07□□□□□ -0.48
KRT4-201ENST00000548097 TRGV4A0A0C4DH28 118 aa12.07□□□□□ -0.48
KRT4-201ENST00000548097 LINC00315P59091 139 aa12.07□□□□□ -0.48
KRT4-201ENST00000548097 HBBP68871 147 aa12.07□□□□□ -0.48
KRT4-201ENST00000548097 TRGC1P0CF51 173 aa12.06□□□□□ -0.48
KRT4-201ENST00000548097 SMIM17P0DL12 118 aa12.06□□□□□ -0.48
KRT4-201ENST00000548097 ZNF56Q15929 161 aa12.06□□□□□ -0.48
KRT4-201ENST00000548097 PHLDA1Q8WV24 401 aaPredicted RBP12.06□□□□□ -0.48
KRT4-201ENST00000548097 Q9UF83 564 aa12.06□□□□□ -0.48
KRT4-201ENST00000548097 A0A0J9YY99 117 aa12.05□□□□□ -0.48
KRT4-201ENST00000548097 AMN1Q8IY45 258 aa12.05□□□□□ -0.48
KRT4-201ENST00000548097 NDUFAF3Q9BU61 184 aa12.05□□□□□ -0.48
KRT4-201ENST00000548097 SMCO4Q9NRQ5 59 aa12.05□□□□□ -0.48
KRT4-201ENST00000548097 TRAV26-2A0A0B4J265 109 aa12.04□□□□□ -0.48
KRT4-201ENST00000548097 F5H697 171 aa12.04□□□□□ -0.48
KRT4-201ENST00000548097 RAB4BP61018 213 aa12.04□□□□□ -0.48
KRT4-201ENST00000548097 YPEL4Q96NS1 127 aa12.04□□□□□ -0.48
KRT4-201ENST00000548097 DPH3P1Q9H4G8 78 aa12.04□□□□□ -0.48
KRT4-201ENST00000548097 P0DMU3 169 aa12.04□□□□□ -0.48
KRT4-201ENST00000548097 FAM231AP0DMU4 169 aa12.04□□□□□ -0.48
KRT4-201ENST00000548097 FAM231CP0DMU5 169 aa12.04□□□□□ -0.48
KRT4-201ENST00000548097 ZFAND6Q6FIF0 208 aa12.04□□□□□ -0.48
KRT4-201ENST00000548097 ATP5L2Q7Z4Y8 100 aa12.04□□□□□ -0.48
KRT4-201ENST00000548097 TRAV26-1A0A087WT03 109 aa12.03□□□□□ -0.48
KRT4-201ENST00000548097 TRAV10A0A0B4J240 114 aa12.03□□□□□ -0.48
KRT4-201ENST00000548097 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
KRT4-201ENST00000548097 GAS8-AS1O95177 125 aa12.03□□□□□ -0.48
KRT4-201ENST00000548097 SMIM15Q7Z3B0 74 aa12.03□□□□□ -0.48
KRT4-201ENST00000548097 RNF185Q96GF1 192 aa12.03□□□□□ -0.48
KRT4-201ENST00000548097 TMEM191AQ9H0A3 160 aa12.03□□□□□ -0.48
KRT4-201ENST00000548097 HHLA3Q9XRX5 114 aa12.03□□□□□ -0.48
KRT4-201ENST00000548097 ZFP2Q6ZN57 461 aa12.02□□□□□ -0.48
KRT4-201ENST00000548097 SLC25A29Q8N8R3 303 aa12.02□□□□□ -0.48
KRT4-201ENST00000548097 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.49
KRT4-201ENST00000548097 SUMO4Q6EEV6 95 aa12.02□□□□□ -0.49
KRT4-201ENST00000548097 TRAV9-1A0A075B6T8 112 aa12.01□□□□□ -0.49
KRT4-201ENST00000548097 SMKR1H3BMG3 65 aa12.01□□□□□ -0.49
KRT4-201ENST00000548097 RHODO00212 210 aa12.01□□□□□ -0.49
KRT4-201ENST00000548097 RAB4AP20338 218 aa12.01□□□□□ -0.49
KRT4-201ENST00000548097 CRYBA4P53673 196 aa12.01□□□□□ -0.49
KRT4-201ENST00000548097 VSIG2Q96IQ7 327 aa12.01□□□□□ -0.49
KRT4-201ENST00000548097 WWC2-AS2Q96NR7 200 aa12.01□□□□□ -0.49
KRT4-201ENST00000548097 STARD9Q9P2P6 4700 aa12□□□□□ -0.49
KRT4-201ENST00000548097 A0A1B0GW15 77 aa12□□□□□ -0.49
KRT4-201ENST00000548097 S100A12P80511 92 aa12□□□□□ -0.49
KRT4-201ENST00000548097 TMEM136Q6ZRR5 245 aa12□□□□□ -0.49
KRT4-201ENST00000548097 IGLL5B9A064 214 aa12□□□□□ -0.49
KRT4-201ENST00000548097 NCR2O95944 276 aa12□□□□□ -0.49
KRT4-201ENST00000548097 FAM104BQ5XKR9 115 aa12□□□□□ -0.49
KRT4-201ENST00000548097 FAM210BQ96KR6 192 aa12□□□□□ -0.49
KRT4-201ENST00000548097 PRO0255Q9UI72 69 aa12□□□□□ -0.49
KRT4-201ENST00000548097 TRBV24-1A0A075B6N3 115 aa11.99□□□□□ -0.49
KRT4-201ENST00000548097 PAX4O43316 350 aa11.99□□□□□ -0.49
KRT4-201ENST00000548097 SLAQ13239 276 aa11.99□□□□□ -0.49
KRT4-201ENST00000548097 MRPL51Q4U2R6 128 aaKnown RBP11.99□□□□□ -0.49
KRT4-201ENST00000548097 GATD1Q8NB37 220 aa11.99□□□□□ -0.49
KRT4-201ENST00000548097 K7EQD1 137 aa11.98□□□□□ -0.49
KRT4-201ENST00000548097 S100A8P05109 93 aa11.98□□□□□ -0.49
KRT4-201ENST00000548097 MUC7Q8TAX7 377 aa11.98□□□□□ -0.49
KRT4-201ENST00000548097 A0A096LPF7 62 aa11.97□□□□□ -0.49
KRT4-201ENST00000548097 KIAA1644Q3SXP7 199 aa11.97□□□□□ -0.49
KRT4-201ENST00000548097 RPL39LQ96EH5 51 aaKnown RBP11.97□□□□□ -0.49
KRT4-201ENST00000548097 TRBV6-4A0A1B0GX49 114 aa11.97□□□□□ -0.49
KRT4-201ENST00000548097 M0QY20 66 aa11.97□□□□□ -0.49
KRT4-201ENST00000548097 CIDEAO60543 219 aa11.97□□□□□ -0.49
KRT4-201ENST00000548097 CTAG1AP78358 180 aa11.97□□□□□ -0.49
KRT4-201ENST00000548097 CEMP1Q6PRD7 247 aaPredicted RBP11.97□□□□□ -0.49
KRT4-201ENST00000548097 GAGE12JA6NER3 117 aa11.96□□□□□ -0.49
KRT4-201ENST00000548097 COLCA2A8K830 154 aa11.96□□□□□ -0.49
KRT4-201ENST00000548097 GYPEP15421 78 aa11.96□□□□□ -0.49
KRT4-201ENST00000548097 RPS10P46783 165 aaKnown RBP11.96□□□□□ -0.49
KRT4-201ENST00000548097 GAGE1Q13065 139 aa11.96□□□□□ -0.49
KRT4-201ENST00000548097 GAGE4Q13068 117 aa11.96□□□□□ -0.49
KRT4-201ENST00000548097 GAGE5Q13069 117 aa11.96□□□□□ -0.49
KRT4-201ENST00000548097 GAGE13Q4V321 117 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms