RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 TMEM262E9PQX1 116 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 GABARAPH6UMI1 98 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 M0R2P5 195 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 GPR31O00270 319 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 MRPS12O15235 138 aaKnown RBP1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 GABARAPO95166 117 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 TNFAIP8O95379 198 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 ANGP03950 147 aaKnown RBP1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 GPX1P07203 203 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 ORM2P19652 201 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 CXCL2P19875 107 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 S100A7P31151 101 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 INPP1P49441 399 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 TAS2R20P59543 309 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 SPCS3P61009 180 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 EIF5AP63241 154 aaKnown RBP1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 ERCC8Q13216 396 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 MPV17L2Q567V2 206 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 NMSQ5H8A3 153 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 PRR9Q5T870 116 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 CFAP126Q5VTH2 177 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 LCN15Q6UWW0 184 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 COX6B2Q6YFQ2 88 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 Q6ZN92 141 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 FP248Q71RG6 208 aaPredicted RBP1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 ZFAND2AQ8N6M9 145 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 C15orf56Q8N910 161 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 LINC00304Q8N9R0 145 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 LHFPL5Q8TAF8 219 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 TSKUQ8WUA8 353 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 TRGV9Q99603 122 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 SHANK2-AS3Q9BTD1 123 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 TMEM147Q9BVK8 224 aa1.13□□□□□ -2.23
DEPDC4-204ENST00000547823 A0A1B0GVG6 124 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 COLCA2A8K830 154 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 SLC17A3O00476 420 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 PEX7O00628 323 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 WBP4O75554 376 aaKnown RBP1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 EIF3GO75821 320 aaKnown RBP eCLIP1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 NMBP08949 121 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 UCHL1P09936 223 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 HSMCR30P0CW71 290 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 MGST1P10620 155 aaKnown RBP1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 MYL12AP19105 171 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 SPRR2EP22531 72 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 SPRR2BP35325 72 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 SPRR2AP35326 72 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 GPX4P36969 197 aaPredicted RBP1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 RANBP1P43487 201 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 AKR1C2P52895 323 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 GNG2P59768 71 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 UBE2MP61081 183 aaKnown RBP1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 CTAG1AP78358 180 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 GPR107Q5VW38 600 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 CLPSL2Q6UWE3 100 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 PHF5AQ7RTV0 110 aaKnown RBP1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 ZNF546Q86UE3 836 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 KRTAP13-1Q8IUC0 172 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 APH1BQ8WW43 257 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 CCDC124Q96CT7 223 aaKnown RBP1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 ATP6V1G3Q96LB4 118 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 MGLLQ99685 303 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 ZNF2Q9BSG1 426 aaPredicted RBP1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 SRRQ9GZT4 340 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 CCDC90BQ9GZT6 254 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 AGPAT4-IT1Q9H0P7 198 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 FXYD6Q9H0Q3 95 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 ATG5Q9H1Y0 275 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 MIXL1Q9H2W2 232 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 RBKSQ9H477 322 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 AUNIPQ9H7T9 357 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 DIABLOQ9NR28 239 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 SLC39A9Q9NUM3 307 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 PKIGQ9Y2B9 76 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 PXMP4Q9Y6I8 212 aa1.12□□□□□ -2.23
DEPDC4-204ENST00000547823 TCRBV3S1A0A5B6 114 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 IRGMA1A4Y4 181 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 EFCAB10A6NFE3 127 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 CEBPZOSA8MTT3 80 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 CASQ2O14958 399 aaPredicted RBP1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 GNRH2O43555 120 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 HYPMO75409 117 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 MT2AP02795 61 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 TLX1NBP0CAT3 122 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 GZMBP10144 247 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 S100GP29377 79 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 UBE2AP49459 152 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 FGF8P55075 233 aaPredicted RBP1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 SURF2Q15527 256 aaPredicted RBP1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 KRTAP13-2Q52LG2 175 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 PCOTHQ58A44 107 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 C9orf116Q5BN46 136 aaPredicted RBP1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 SPATA24Q86W54 205 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 LINC00269Q8N2A0 174 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 OR2G3Q8NGZ4 309 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 OR1S1Q8NH92 325 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 KCNS1Q96KK3 526 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 HIGD1AQ9Y241 93 aa1.11□□□□□ -2.23
DEPDC4-204ENST00000547823 U3KQ87 197 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms