RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 TENM2Q9NT68 2774 aa16.22■□□□□ 0.19
SMARCD1-203ENST00000547247 A0A087WWL8 130 aa16.22■□□□□ 0.19
SMARCD1-203ENST00000547247 CRYGDP07320 174 aa16.22■□□□□ 0.19
SMARCD1-203ENST00000547247 CRYBA4P53673 196 aa16.22■□□□□ 0.19
SMARCD1-203ENST00000547247 C15orf53Q8NAA6 179 aa16.22■□□□□ 0.19
SMARCD1-203ENST00000547247 AP1S3Q96PC3 154 aa16.22■□□□□ 0.19
SMARCD1-203ENST00000547247 MSRB1Q9NZV6 116 aa16.22■□□□□ 0.19
SMARCD1-203ENST00000547247 APLNQ9ULZ1 77 aa16.22■□□□□ 0.19
SMARCD1-203ENST00000547247 CARHSP1Q9Y2V2 147 aaKnown RBP16.22■□□□□ 0.19
SMARCD1-203ENST00000547247 H3BNG1 76 aa16.21■□□□□ 0.19
SMARCD1-203ENST00000547247 PAX4O43316 350 aa16.21■□□□□ 0.19
SMARCD1-203ENST00000547247 GATA1P15976 413 aaPredicted RBP16.21■□□□□ 0.19
SMARCD1-203ENST00000547247 UFSP1Q6NVU6 142 aa16.21■□□□□ 0.19
SMARCD1-203ENST00000547247 BORCS7Q96B45 105 aa16.21■□□□□ 0.19
SMARCD1-203ENST00000547247 ANAPC16Q96DE5 110 aa16.21■□□□□ 0.19
SMARCD1-203ENST00000547247 VSIG2Q96IQ7 327 aa16.21■□□□□ 0.19
SMARCD1-203ENST00000547247 KMT2CQ8NEZ4 4911 aaKnown RBP16.21■□□□□ 0.19
SMARCD1-203ENST00000547247 TWIST1Q15672 202 aa16.21■□□□□ 0.18
SMARCD1-203ENST00000547247 NAT8BQ9UHF3 227 aa16.21■□□□□ 0.18
SMARCD1-203ENST00000547247 SMIM27A0A1W2PRY6 76 aa16.2■□□□□ 0.18
SMARCD1-203ENST00000547247 TRGC1P0CF51 173 aa16.2■□□□□ 0.18
SMARCD1-203ENST00000547247 C14orf178Q8N769 122 aaPredicted RBP16.2■□□□□ 0.18
SMARCD1-203ENST00000547247 NUP35Q8NFH5 326 aa16.2■□□□□ 0.18
SMARCD1-203ENST00000547247 PLECQ15149 4684 aaKnown RBP16.19■□□□□ 0.18
SMARCD1-203ENST00000547247 SMIM17P0DL12 118 aa16.19■□□□□ 0.18
SMARCD1-203ENST00000547247 A0A1B0GUT8 65 aa16.18■□□□□ 0.18
SMARCD1-203ENST00000547247 TRBV6-4A0A1B0GX49 114 aa16.18■□□□□ 0.18
SMARCD1-203ENST00000547247 SLC7A5P1Q8MH63 180 aa16.18■□□□□ 0.18
SMARCD1-203ENST00000547247 NUDT3O95989 172 aa16.17■□□□□ 0.18
SMARCD1-203ENST00000547247 NDUFA5Q16718 116 aa16.17■□□□□ 0.18
SMARCD1-203ENST00000547247 SLC25A29Q8N8R3 303 aa16.17■□□□□ 0.18
SMARCD1-203ENST00000547247 EVI2AP22794 236 aa16.16■□□□□ 0.18
SMARCD1-203ENST00000547247 RHOHQ15669 191 aa16.16■□□□□ 0.18
SMARCD1-203ENST00000547247 Q6ZSN1 163 aa16.16■□□□□ 0.18
SMARCD1-203ENST00000547247 KIF25-AS1Q9Y6Z4 181 aa16.16■□□□□ 0.18
SMARCD1-203ENST00000547247 SMIM15Q7Z3B0 74 aa16.15■□□□□ 0.18
SMARCD1-203ENST00000547247 PRADC1Q9BSG0 188 aa16.15■□□□□ 0.18
SMARCD1-203ENST00000547247 ICOSQ9Y6W8 199 aa16.15■□□□□ 0.18
SMARCD1-203ENST00000547247 APOC3P02656 99 aa16.14■□□□□ 0.17
SMARCD1-203ENST00000547247 ZNF56Q15929 161 aa16.14■□□□□ 0.17
SMARCD1-203ENST00000547247 CTDSP1Q9GZU7 261 aa16.14■□□□□ 0.17
SMARCD1-203ENST00000547247 K7EQD1 137 aa16.13■□□□□ 0.17
SMARCD1-203ENST00000547247 GYPEP15421 78 aa16.13■□□□□ 0.17
SMARCD1-203ENST00000547247 RAB4BP61018 213 aa16.13■□□□□ 0.17
SMARCD1-203ENST00000547247 RIGQ13278 110 aa16.13■□□□□ 0.17
SMARCD1-203ENST00000547247 DPH3P1Q9H4G8 78 aa16.13■□□□□ 0.17
SMARCD1-203ENST00000547247 A0A096LPF7 62 aa16.13■□□□□ 0.17
SMARCD1-203ENST00000547247 F5H697 171 aa16.13■□□□□ 0.17
SMARCD1-203ENST00000547247 LINC00315P59091 139 aa16.13■□□□□ 0.17
SMARCD1-203ENST00000547247 MRPL23Q16540 153 aaKnown RBP16.13■□□□□ 0.17
SMARCD1-203ENST00000547247 CLRN3Q8NCR9 226 aa16.13■□□□□ 0.17
SMARCD1-203ENST00000547247 LOC100131303A0A0U1RQF7 123 aa16.11■□□□□ 0.17
SMARCD1-203ENST00000547247 MGPP08493 103 aa16.11■□□□□ 0.17
SMARCD1-203ENST00000547247 RHEBQ15382 184 aa16.11■□□□□ 0.17
SMARCD1-203ENST00000547247 C7orf77A4D0Y5 90 aa16.1■□□□□ 0.17
SMARCD1-203ENST00000547247 SVBPQ8N300 66 aa16.1■□□□□ 0.17
SMARCD1-203ENST00000547247 SRIP30626 198 aa16.09■□□□□ 0.17
SMARCD1-203ENST00000547247 FAM3BP58499 235 aaPredicted RBP16.09■□□□□ 0.17
SMARCD1-203ENST00000547247 SACSQ9NZJ4 4579 aa16.09■□□□□ 0.17
SMARCD1-203ENST00000547247 A0A087WWC5 75 aa16.09■□□□□ 0.17
SMARCD1-203ENST00000547247 SNAPINO95295 136 aa16.09■□□□□ 0.17
SMARCD1-203ENST00000547247 P0DMU3 169 aa16.09■□□□□ 0.17
SMARCD1-203ENST00000547247 FAM231AP0DMU4 169 aa16.09■□□□□ 0.17
SMARCD1-203ENST00000547247 FAM231CP0DMU5 169 aa16.09■□□□□ 0.17
SMARCD1-203ENST00000547247 IMMP2LQ96T52 175 aa16.09■□□□□ 0.17
SMARCD1-203ENST00000547247 TMEM242Q9NWH2 141 aa16.09■□□□□ 0.17
SMARCD1-203ENST00000547247 LCE6AA0A183 80 aa16.08■□□□□ 0.16
SMARCD1-203ENST00000547247 A0A1B0GW15 77 aa16.08■□□□□ 0.16
SMARCD1-203ENST00000547247 LGALS9CQ6DKI2 356 aa16.08■□□□□ 0.16
SMARCD1-203ENST00000547247 NEGR1Q7Z3B1 354 aa16.08■□□□□ 0.16
SMARCD1-203ENST00000547247 TMEM191AQ9H0A3 160 aa16.08■□□□□ 0.16
SMARCD1-203ENST00000547247 RPS10P5Q9NQ39 176 aa16.08■□□□□ 0.16
SMARCD1-203ENST00000547247 TRBV10-1A0A0K0K1A3 114 aa16.07■□□□□ 0.16
SMARCD1-203ENST00000547247 MRPL54Q6P161 138 aaKnown RBP16.07■□□□□ 0.16
SMARCD1-203ENST00000547247 LYSTQ99698 3801 aa16.07■□□□□ 0.16
SMARCD1-203ENST00000547247 Q9UF83 564 aa16.07■□□□□ 0.16
SMARCD1-203ENST00000547247 SH2D6Q7Z4S9 175 aa16.06■□□□□ 0.16
SMARCD1-203ENST00000547247 LINC00476Q8WZB0 136 aa16.06■□□□□ 0.16
SMARCD1-203ENST00000547247 H7C1H1 209 aa16.05■□□□□ 0.16
SMARCD1-203ENST00000547247 CAMPP49913 170 aa16.05■□□□□ 0.16
SMARCD1-203ENST00000547247 CCL18P55774 89 aa16.05■□□□□ 0.16
SMARCD1-203ENST00000547247 SUMO4Q6EEV6 95 aa16.05■□□□□ 0.16
SMARCD1-203ENST00000547247 KCNIP4Q6PIL6 250 aa16.05■□□□□ 0.16
SMARCD1-203ENST00000547247 ATP5L2Q7Z4Y8 100 aa16.05■□□□□ 0.16
SMARCD1-203ENST00000547247 GAGE12JA6NER3 117 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 LY6G6CO95867 125 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 S100A8P05109 93 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 HBBP68871 147 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 GAGE1Q13065 139 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 GAGE4Q13068 117 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 GAGE5Q13069 117 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 GAGE13Q4V321 117 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 M0QY20 66 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 RPL36AP83881 106 aaKnown RBP16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 UBE2DNLQ8IWF7 75 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 RPL36ALQ969Q0 106 aaKnown RBP16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 BTF3L4Q96K17 158 aa16.04■□□□□ 0.16
SMARCD1-203ENST00000547247 A0A1B0GXF2 115 aa16.03■□□□□ 0.16
SMARCD1-203ENST00000547247 ESRGQ1W209 222 aa16.03■□□□□ 0.16
SMARCD1-203ENST00000547247 S100PP25815 95 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms