RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 Q6ZSN1 163 aa10.81□□□□□ -0.68
DDX54-204ENST00000546898 NFE4Q86UQ8 179 aa10.81□□□□□ -0.68
DDX54-204ENST00000546898 C10orf126Q8N4M7 172 aa10.81□□□□□ -0.68
DDX54-204ENST00000546898 ATP6V0E2Q8NHE4 81 aa10.81□□□□□ -0.68
DDX54-204ENST00000546898 SSBP4Q9BWG4 385 aaPredicted RBP10.81□□□□□ -0.68
DDX54-204ENST00000546898 GTSF1LQ9H1H1 148 aa10.81□□□□□ -0.68
DDX54-204ENST00000546898 MED9Q9NWA0 146 aa10.81□□□□□ -0.68
DDX54-204ENST00000546898 CRYGDP07320 174 aa10.8□□□□□ -0.68
DDX54-204ENST00000546898 OR5AL1P0C617 328 aa10.8□□□□□ -0.68
DDX54-204ENST00000546898 LELP1Q5T871 98 aa10.8□□□□□ -0.68
DDX54-204ENST00000546898 BIN3Q9NQY0 253 aa10.8□□□□□ -0.68
DDX54-204ENST00000546898 A0A087WWL8 130 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 IGHV3-38A0A0C4DH36 116 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 A0A1B0GVG6 124 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 GAGE12JA6NER3 117 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 GAGE1Q13065 139 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 GAGE4Q13068 117 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 GAGE5Q13069 117 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 GAGE13Q4V321 117 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 LINC01556Q5JQF7 62 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 OR10J3Q5JRS4 329 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 Q6ZRN7 208 aaPredicted RBP10.79□□□□□ -0.68
DDX54-204ENST00000546898 C14orf178Q8N769 122 aaPredicted RBP10.79□□□□□ -0.68
DDX54-204ENST00000546898 OR10AG1Q8NH19 301 aa10.79□□□□□ -0.68
DDX54-204ENST00000546898 DAZAP1Q96EP5 407 aaKnown RBP10.79□□□□□ -0.68
DDX54-204ENST00000546898 RAB19A4D1S5 217 aa10.78□□□□□ -0.68
DDX54-204ENST00000546898 C19orf71A6NCJ1 209 aa10.78□□□□□ -0.68
DDX54-204ENST00000546898 RPS20P60866 119 aaKnown RBP10.78□□□□□ -0.68
DDX54-204ENST00000546898 LYPD6BQ8NI32 183 aa10.78□□□□□ -0.68
DDX54-204ENST00000546898 DYNC1H1Q14204 4646 aaKnown RBP10.77□□□□□ -0.69
DDX54-204ENST00000546898 TRBV20OR9-2A0A075B6H5 130 aa10.77□□□□□ -0.69
DDX54-204ENST00000546898 TRBV10-1A0A0K0K1A3 114 aa10.77□□□□□ -0.69
DDX54-204ENST00000546898 SPANXN1Q5VSR9 72 aa10.77□□□□□ -0.69
DDX54-204ENST00000546898 MSRB1Q9NZV6 116 aa10.77□□□□□ -0.69
DDX54-204ENST00000546898 KIAA1109Q2LD37 5005 aa10.76□□□□□ -0.69
DDX54-204ENST00000546898 XKRY2A2RUG3 117 aa10.76□□□□□ -0.69
DDX54-204ENST00000546898 NKX2-5P52952 324 aaPredicted RBP10.76□□□□□ -0.69
DDX54-204ENST00000546898 OR2D3Q8NGH3 330 aa10.76□□□□□ -0.69
DDX54-204ENST00000546898 A0A087WWC5 75 aa10.75□□□□□ -0.69
DDX54-204ENST00000546898 TMEM250H0YL14 139 aa10.75□□□□□ -0.69
DDX54-204ENST00000546898 P01737 135 aa10.75□□□□□ -0.69
DDX54-204ENST00000546898 IGLC6P0CF74 106 aa10.75□□□□□ -0.69
DDX54-204ENST00000546898 RAB4BP61018 213 aa10.75□□□□□ -0.69
DDX54-204ENST00000546898 AP1S3Q96PC3 154 aa10.75□□□□□ -0.69
DDX54-204ENST00000546898 RBFOX3A6NFN3 312 aa10.74□□□□□ -0.69
DDX54-204ENST00000546898 ERVFC1-1P60608 527 aa10.74□□□□□ -0.69
DDX54-204ENST00000546898 RPL36AP83881 106 aaKnown RBP10.74□□□□□ -0.69
DDX54-204ENST00000546898 ZNF56Q15929 161 aa10.74□□□□□ -0.69
DDX54-204ENST00000546898 FER1L6-AS1Q8NA97 138 aa10.74□□□□□ -0.69
DDX54-204ENST00000546898 RPL36ALQ969Q0 106 aaKnown RBP10.74□□□□□ -0.69
DDX54-204ENST00000546898 Q9UF83 564 aa10.74□□□□□ -0.69
DDX54-204ENST00000546898 PCLOQ9Y6V0 5065 aa10.73□□□□□ -0.69
DDX54-204ENST00000546898 C16orf90A8MZG2 172 aa10.73□□□□□ -0.69
DDX54-204ENST00000546898 NDUFS6O75380 124 aaKnown RBP10.73□□□□□ -0.69
DDX54-204ENST00000546898 SPATA12Q7Z6I5 190 aa10.73□□□□□ -0.69
DDX54-204ENST00000546898 OR10G8Q8NGN5 311 aa10.73□□□□□ -0.69
DDX54-204ENST00000546898 TNFRSF18Q9Y5U5 241 aa10.73□□□□□ -0.69
DDX54-204ENST00000546898 TRBV7-3A0A075B6L6 115 aa10.72□□□□□ -0.69
DDX54-204ENST00000546898 MUC21A0A0G2JKD1 596 aa10.72□□□□□ -0.69
DDX54-204ENST00000546898 MUC21A0A140T8X8 626 aa10.72□□□□□ -0.69
DDX54-204ENST00000546898 IBA57-AS1B1ANH7 110 aa10.72□□□□□ -0.69
DDX54-204ENST00000546898 EREGO14944 169 aa10.72□□□□□ -0.69
DDX54-204ENST00000546898 SMIM17P0DL12 118 aa10.72□□□□□ -0.69
DDX54-204ENST00000546898 GZMBP10144 247 aa10.72□□□□□ -0.69
DDX54-204ENST00000546898 CACNG7P62955 275 aa10.72□□□□□ -0.69
DDX54-204ENST00000546898 LAGE3Q14657 143 aa10.72□□□□□ -0.69
DDX54-204ENST00000546898 TPPP3Q9BW30 176 aa10.72□□□□□ -0.69
DDX54-204ENST00000546898 F2Z2F3 143 aa10.71□□□□□ -0.69
DDX54-204ENST00000546898 UBE2D3P61077 147 aa10.71□□□□□ -0.69
DDX54-204ENST00000546898 UBE2D2P62837 147 aa10.71□□□□□ -0.69
DDX54-204ENST00000546898 NUDT10Q8NFP7 164 aa10.71□□□□□ -0.69
DDX54-204ENST00000546898 NUDT11Q96G61 164 aa10.71□□□□□ -0.69
DDX54-204ENST00000546898 KIF25-AS1Q9Y6Z4 181 aa10.71□□□□□ -0.69
DDX54-204ENST00000546898 IGHV3-30P01768 117 aa10.7□□□□□ -0.7
DDX54-204ENST00000546898 IGHV3-33P01772 117 aa10.7□□□□□ -0.7
DDX54-204ENST00000546898 IGHV3-30-3P0DP02 117 aa10.7□□□□□ -0.7
DDX54-204ENST00000546898 IGHV3-30-5P0DP03 117 aa10.7□□□□□ -0.7
DDX54-204ENST00000546898 TOR2AQ5JU69 321 aa10.7□□□□□ -0.7
DDX54-204ENST00000546898 OCC1Q8TAD7 63 aa10.7□□□□□ -0.7
DDX54-204ENST00000546898 F5H697 171 aa10.69□□□□□ -0.7
DDX54-204ENST00000546898 K7EN84 100 aa10.69□□□□□ -0.7
DDX54-204ENST00000546898 CTRLP40313 264 aa10.69□□□□□ -0.7
DDX54-204ENST00000546898 SSTP61278 116 aa10.69□□□□□ -0.7
DDX54-204ENST00000546898 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.69□□□□□ -0.7
DDX54-204ENST00000546898 NEXN-AS1Q8NBZ9 246 aa10.69□□□□□ -0.7
DDX54-204ENST00000546898 FAM210AQ96ND0 272 aa10.69□□□□□ -0.7
DDX54-204ENST00000546898 EIF5A2Q9GZV4 153 aaKnown RBP10.69□□□□□ -0.7
DDX54-204ENST00000546898 RPP21Q9H633 154 aaKnown RBP10.69□□□□□ -0.7
DDX54-204ENST00000546898 A0A087WTM6 91 aa10.68□□□□□ -0.7
DDX54-204ENST00000546898 TRGC1P0CF51 173 aa10.68□□□□□ -0.7
DDX54-204ENST00000546898 KRTAP10-2P60368 255 aa10.68□□□□□ -0.7
DDX54-204ENST00000546898 WDR73Q6P4I2 378 aa10.68□□□□□ -0.7
DDX54-204ENST00000546898 LYZL1Q6UWQ5 148 aa10.68□□□□□ -0.7
DDX54-204ENST00000546898 RNASE7Q9H1E1 156 aaKnown RBP10.68□□□□□ -0.7
DDX54-204ENST00000546898 PSCAO43653 123 aa10.67□□□□□ -0.7
DDX54-204ENST00000546898 CDPF1Q6NVV7 123 aa10.67□□□□□ -0.7
DDX54-204ENST00000546898 FAM231DQ6ZW35 169 aa10.67□□□□□ -0.7
DDX54-204ENST00000546898 NIT1Q86X76 327 aa10.67□□□□□ -0.7
DDX54-204ENST00000546898 CHCHD7Q9BUK0 85 aa10.67□□□□□ -0.7
DDX54-204ENST00000546898 CNFNQ9BYD5 112 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms