RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SND1-IT1Q9HBX3 110 aa9.94□□□□□ -0.82
PTCH1-212ENST00000546744 A0A0G2JNJ9 132 aa9.94□□□□□ -0.82
PTCH1-212ENST00000546744 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
PTCH1-212ENST00000546744 BUB3O43684 328 aa9.94□□□□□ -0.82
PTCH1-212ENST00000546744 SUMO4Q6EEV6 95 aa9.94□□□□□ -0.82
PTCH1-212ENST00000546744 MSRB1Q9NZV6 116 aa9.94□□□□□ -0.82
PTCH1-212ENST00000546744 Q9UFV3 132 aa9.94□□□□□ -0.82
PTCH1-212ENST00000546744 U3KQK5 164 aa9.94□□□□□ -0.82
PTCH1-212ENST00000546744 NOTCH3Q9UM47 2321 aa9.94□□□□□ -0.82
PTCH1-212ENST00000546744 NCOA6Q14686 2063 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-212ENST00000546744 IGLC6P0CF74 106 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 MIAQ16674 131 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 GDF5OSQ5U4N7 250 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 PTH2Q96A98 100 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 UFSP1Q6NVU6 142 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 C2orf91Q6ZV80 131 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 COX7A2LO14548 114 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 COL8A2P25067 703 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 MDFICQ9P1T7 246 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 FAM240AA0A1B0GVK7 77 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 IGFL3Q6UXB1 125 aa9.93□□□□□ -0.82
PTCH1-212ENST00000546744 SZT2Q5T011 3432 aa9.92□□□□□ -0.82
PTCH1-212ENST00000546744 TMEM256-PLSCR3K7ERE1 68 aa9.92□□□□□ -0.82
PTCH1-212ENST00000546744 NDUFC1O43677 76 aa9.92□□□□□ -0.82
PTCH1-212ENST00000546744 CFAP126Q5VTH2 177 aa9.92□□□□□ -0.82
PTCH1-212ENST00000546744 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
PTCH1-212ENST00000546744 NDUFA7O95182 113 aa9.92□□□□□ -0.82
PTCH1-212ENST00000546744 ASPHD1Q5U4P2 390 aa9.92□□□□□ -0.82
PTCH1-212ENST00000546744 DEFB104AQ8WTQ1 72 aa9.92□□□□□ -0.82
PTCH1-212ENST00000546744 LINC00574Q9H8X3 128 aa9.92□□□□□ -0.82
PTCH1-212ENST00000546744 FUSP35637 526 aaKnown RBP eCLIP9.91□□□□□ -0.82
PTCH1-212ENST00000546744 DAZ2Q13117 558 aaKnown RBP9.91□□□□□ -0.82
PTCH1-212ENST00000546744 C16orf54Q6UWD8 224 aa9.91□□□□□ -0.82
PTCH1-212ENST00000546744 DAZ4Q86SG3 579 aaKnown RBP9.91□□□□□ -0.82
PTCH1-212ENST00000546744 C20orf203Q8NBC4 194 aa9.91□□□□□ -0.82
PTCH1-212ENST00000546744 DAZ3Q9NR90 486 aaKnown RBP9.91□□□□□ -0.82
PTCH1-212ENST00000546744 ELANEP08246 267 aa9.9□□□□□ -0.82
PTCH1-212ENST00000546744 IGKV3D-7A0A0C4DH55 119 aa9.9□□□□□ -0.82
PTCH1-212ENST00000546744 CTSGP08311 255 aa9.9□□□□□ -0.82
PTCH1-212ENST00000546744 HOXD3P31249 432 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-212ENST00000546744 KLK9Q9UKQ9 250 aa9.9□□□□□ -0.82
PTCH1-212ENST00000546744 CACNA1AO00555 2505 aa9.9□□□□□ -0.82
PTCH1-212ENST00000546744 IGHV3-53P01767 116 aa9.9□□□□□ -0.83
PTCH1-212ENST00000546744 CXCL5P42830 114 aa9.9□□□□□ -0.83
PTCH1-212ENST00000546744 EML5Q05BV3 1969 aa9.9□□□□□ -0.83
PTCH1-212ENST00000546744 PRR30Q53SZ7 412 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-212ENST00000546744 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
PTCH1-212ENST00000546744 FAM236DA0A1B0GTK5 79 aa9.89□□□□□ -0.83
PTCH1-212ENST00000546744 FAM236CP0DP71 79 aa9.89□□□□□ -0.83
PTCH1-212ENST00000546744 NEXN-AS1Q8NBZ9 246 aa9.89□□□□□ -0.83
PTCH1-212ENST00000546744 G3V318 75 aa9.89□□□□□ -0.83
PTCH1-212ENST00000546744 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
PTCH1-212ENST00000546744 HTN3P15516 51 aa9.89□□□□□ -0.83
PTCH1-212ENST00000546744 GNRH2O43555 120 aa9.89□□□□□ -0.83
PTCH1-212ENST00000546744 A0A0J9YY99 117 aa9.88□□□□□ -0.83
PTCH1-212ENST00000546744 MP68P56378 58 aa9.88□□□□□ -0.83
PTCH1-212ENST00000546744 IGKV1D-37A0A075B6S9 117 aa9.88□□□□□ -0.83
PTCH1-212ENST00000546744 EIF4EBP1Q13541 118 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-212ENST00000546744 HIST2H2BCQ6DN03 193 aa9.88□□□□□ -0.83
PTCH1-212ENST00000546744 HIST2H2BDQ6DRA6 164 aa9.88□□□□□ -0.83
PTCH1-212ENST00000546744 TRIOO75962 3097 aa9.88□□□□□ -0.83
PTCH1-212ENST00000546744 IGHV3-30-3P0DP02 117 aa9.88□□□□□ -0.83
PTCH1-212ENST00000546744 SERP2Q8N6R1 65 aa9.88□□□□□ -0.83
PTCH1-212ENST00000546744 DIAPH2-AS1Q14236 149 aa9.87□□□□□ -0.83
PTCH1-212ENST00000546744 NKAPP1Q8N9T2 125 aa9.87□□□□□ -0.83
PTCH1-212ENST00000546744 TEX22C9J3V5 150 aa9.87□□□□□ -0.83
PTCH1-212ENST00000546744 K7EMT4 169 aa9.87□□□□□ -0.83
PTCH1-212ENST00000546744 LOXL1Q08397 574 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-212ENST00000546744 DAND5Q8N907 189 aa9.87□□□□□ -0.83
PTCH1-212ENST00000546744 IGLV2-23P01705 113 aa9.87□□□□□ -0.83
PTCH1-212ENST00000546744 IGHV3-33P01772 117 aa9.87□□□□□ -0.83
PTCH1-212ENST00000546744 MYCNOSP40205 109 aa9.87□□□□□ -0.83
PTCH1-212ENST00000546744 CENPVL3A0A0U1RRI6 287 aa9.86□□□□□ -0.83
PTCH1-212ENST00000546744 TIMM17BO60830 172 aa9.86□□□□□ -0.83
PTCH1-212ENST00000546744 WT1P19544 449 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-212ENST00000546744 PRSS33Q8NF86 280 aa9.86□□□□□ -0.83
PTCH1-212ENST00000546744 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTCH1-212ENST00000546744 COX7CP15954 63 aa9.86□□□□□ -0.83
PTCH1-212ENST00000546744 ZGRF1Q86YA3 2104 aa9.86□□□□□ -0.83
PTCH1-212ENST00000546744 CGB3P0DN86 165 aa9.86□□□□□ -0.83
PTCH1-212ENST00000546744 CGB7P0DN87 165 aa9.86□□□□□ -0.83
PTCH1-212ENST00000546744 Q8N976 141 aa9.86□□□□□ -0.83
PTCH1-212ENST00000546744 PIP4P1Q86T03 277 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 UBE2E2Q96LR5 201 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 TRAV25A0A0B4J276 109 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 TMEM61Q8N0U2 210 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 COX7B2Q8TF08 81 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 GTF3C1Q12789 2109 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 NDUFC2-KCTD14E9PQ53 114 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 NXPH4O95158 308 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 IGLV1-47P01700 117 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 CRIP3Q6Q6R5 217 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 LINC00322Q6ZN03 302 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-212ENST00000546744 MED13Q9UHV7 2174 aa9.85□□□□□ -0.83
PTCH1-212ENST00000546744 CLEC2BQ92478 149 aa9.84□□□□□ -0.83
PTCH1-212ENST00000546744 ODF3Q96PU9 254 aa9.84□□□□□ -0.83
PTCH1-212ENST00000546744 V9GYY9 64 aa9.84□□□□□ -0.83
PTCH1-212ENST00000546744 TEX49A0A1B0GTD5 131 aa9.84□□□□□ -0.83
PTCH1-212ENST00000546744 LECT2O14960 151 aa9.84□□□□□ -0.83
PTCH1-212ENST00000546744 RS1O15537 224 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms