RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 M0R036 132 aa5.08□□□□□ -1.6
CPSF7-224ENST00000544990 SH2D1AO60880 128 aa5.08□□□□□ -1.6
CPSF7-224ENST00000544990 TAGLN2P37802 199 aaKnown RBP5.08□□□□□ -1.6
CPSF7-224ENST00000544990 CRIP1P50238 77 aa5.08□□□□□ -1.6
CPSF7-224ENST00000544990 ZNF506Q5JVG8 444 aa5.08□□□□□ -1.6
CPSF7-224ENST00000544990 DNLZQ5SXM8 178 aa5.08□□□□□ -1.6
CPSF7-224ENST00000544990 CFAP126Q5VTH2 177 aa5.08□□□□□ -1.6
CPSF7-224ENST00000544990 LYPD5Q6UWN5 251 aa5.08□□□□□ -1.6
CPSF7-224ENST00000544990 PRADC1Q9BSG0 188 aa5.08□□□□□ -1.6
CPSF7-224ENST00000544990 IL36BQ9NZH7 164 aa5.08□□□□□ -1.6
CPSF7-224ENST00000544990 TRBV6-4A0A1B0GX49 114 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 A0A1W2PPQ1 181 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 GRIFINA4D1Z8 144 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 H3BVH4 76 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 RTL8CO15255 209 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 SIVA1O15304 175 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 PDE6DO43924 150 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 ARMS2P0C7Q2 107 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 MGST1P10620 155 aaKnown RBP5.07□□□□□ -1.6
CPSF7-224ENST00000544990 GATA1P15976 413 aaPredicted RBP5.07□□□□□ -1.6
CPSF7-224ENST00000544990 CCL20P78556 96 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 RHOHQ15669 191 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 C6orf223Q8N319 242 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 C9orf62Q8N4C0 152 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 NHLRC2Q8NBF2 726 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 PHLDA3Q9Y5J5 127 aa5.07□□□□□ -1.6
CPSF7-224ENST00000544990 TRAV9-2A0A087WT02 112 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 TMSB15BA0A087X1C1 80 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 IGHV3-73A0A0B4J1V6 119 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 GAGE10A6NGK3 116 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 NXPH4O95158 308 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 RPL35P42766 123 aaKnown RBP5.06□□□□□ -1.6
CPSF7-224ENST00000544990 MEF2BQ02080 365 aaPredicted RBP5.06□□□□□ -1.6
CPSF7-224ENST00000544990 PRR27Q6MZM9 219 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 ZFP2Q6ZN57 461 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 SLC25A29Q8N8R3 303 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 C11orf52Q96A22 123 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 TM2D2Q9BX73 214 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 VAX2Q9UIW0 290 aa5.06□□□□□ -1.6
CPSF7-224ENST00000544990 VPS13DQ5THJ4 4388 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 RHODO00212 210 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 CXCL1P09341 107 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 BCL2P10415 239 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 ALKAL2Q6UX46 152 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 ZFP82Q8N141 532 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 SMIM12Q96EX1 92 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 PARLQ9H300 379 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 BIN3Q9NQY0 253 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 MED9Q9NWA0 146 aa5.05□□□□□ -1.6
CPSF7-224ENST00000544990 LOC100131303A0A0U1RQF7 123 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 K7EP13 123 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 M0R381 172 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 EVI2AP22794 236 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 GNG4P50150 75 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 CENPWQ5EE01 88 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 ATP6V0E2Q8NHE4 81 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 SFRP2Q96HF1 295 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 DERL1Q9BUN8 251 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 SCRT2Q9NQ03 307 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 LY96Q9Y6Y9 160 aa5.04□□□□□ -1.6
CPSF7-224ENST00000544990 TRAV8-6A0A0B4J262 113 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 A0A1B0GVG6 124 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 A0A1B0GVY2 172 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 XKRY2A2RUG3 117 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 RAB19A4D1S5 217 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 NKX2-5P52952 324 aaPredicted RBP5.03□□□□□ -1.6
CPSF7-224ENST00000544990 RPS20P60866 119 aaKnown RBP5.03□□□□□ -1.6
CPSF7-224ENST00000544990 RPL19P84098 196 aaKnown RBP5.03□□□□□ -1.6
CPSF7-224ENST00000544990 FAM74A4Q5TZK3 123 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 SPANXN1Q5VSR9 72 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 ZNF575Q86XF7 245 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 SAMD10Q9BYL1 202 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 GTSF1LQ9H1H1 148 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 JPT2Q9H910 190 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 DNAH6Q9C0G6 4158 aa5.03□□□□□ -1.6
CPSF7-224ENST00000544990 IGHV3-38A0A0C4DH36 116 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 GAGE12JA6NER3 117 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 RBFOX3A6NFN3 312 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 SNAI2O43623 268 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 P01737 135 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 CRYGDP07320 174 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 OR5AL1P0C617 328 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 GAGE1Q13065 139 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 GAGE4Q13068 117 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 GAGE5Q13069 117 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 OR10J3Q5JRS4 329 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 UFSP1Q6NVU6 142 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 NFE4Q86UQ8 179 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 WFDC10BQ8IUB3 73 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 C10orf126Q8N4M7 172 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 KRTAP1-5Q9BYS1 174 aa5.02□□□□□ -1.61
CPSF7-224ENST00000544990 TRBV10-1A0A0K0K1A3 114 aa5.01□□□□□ -1.61
CPSF7-224ENST00000544990 TMEM250H0YL14 139 aa5.01□□□□□ -1.61
CPSF7-224ENST00000544990 IGLV2-8P01709 118 aa5.01□□□□□ -1.61
CPSF7-224ENST00000544990 DNAH10OSP0CZ25 163 aa5.01□□□□□ -1.61
CPSF7-224ENST00000544990 SMIM17P0DL12 118 aa5.01□□□□□ -1.61
CPSF7-224ENST00000544990 LINC00315P59091 139 aa5.01□□□□□ -1.61
CPSF7-224ENST00000544990 RAB4BP61018 213 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms