RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 RAB4BP61018 213 aa6.84□□□□□ -1.31
YBX3-215ENST00000544504 SBSPONQ8IVN8 264 aa6.84□□□□□ -1.31
YBX3-215ENST00000544504 GATD1Q8NB37 220 aa6.84□□□□□ -1.31
YBX3-215ENST00000544504 IL17DQ8TAD2 202 aa6.84□□□□□ -1.31
YBX3-215ENST00000544504 RASL10AQ92737 203 aa6.84□□□□□ -1.31
YBX3-215ENST00000544504 FRZBQ92765 325 aa6.84□□□□□ -1.31
YBX3-215ENST00000544504 TMEM191AQ9H0A3 160 aa6.84□□□□□ -1.31
YBX3-215ENST00000544504 RHODO00212 210 aa6.83□□□□□ -1.32
YBX3-215ENST00000544504 RPS10P46783 165 aaKnown RBP6.83□□□□□ -1.32
YBX3-215ENST00000544504 TM2D3Q9BRN9 247 aa6.83□□□□□ -1.32
YBX3-215ENST00000544504 C11orf68Q9H3H3 251 aaKnown RBP6.83□□□□□ -1.32
YBX3-215ENST00000544504 DPH3P1Q9H4G8 78 aa6.83□□□□□ -1.32
YBX3-215ENST00000544504 NOP10Q9NPE3 64 aaKnown RBP6.83□□□□□ -1.32
YBX3-215ENST00000544504 TRGV1A0A0A0MS02 117 aa6.82□□□□□ -1.32
YBX3-215ENST00000544504 IGHV4-28A0A0C4DH34 117 aa6.82□□□□□ -1.32
YBX3-215ENST00000544504 MUC21A0A0G2JKD1 596 aa6.82□□□□□ -1.32
YBX3-215ENST00000544504 MUC21A0A140T8X8 626 aa6.82□□□□□ -1.32
YBX3-215ENST00000544504 DMRTA1Q5VZB9 504 aa6.82□□□□□ -1.32
YBX3-215ENST00000544504 TMEM136Q6ZRR5 245 aa6.82□□□□□ -1.32
YBX3-215ENST00000544504 Q8NAQ8 132 aa6.82□□□□□ -1.32
YBX3-215ENST00000544504 TRAPPC1Q9Y5R8 145 aa6.82□□□□□ -1.32
YBX3-215ENST00000544504 TRGV2A0A075B6R0 118 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 PLAC8L1A1L4L8 177 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 APCSP02743 223 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 PPBPP02775 128 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 PRM2P04554 102 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 SPART-AS1P0CW21 52 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 EMP1P54849 157 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 SSTP61278 116 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 FAM104BQ5XKR9 115 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 ZFP2Q6ZN57 461 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.81□□□□□ -1.32
YBX3-215ENST00000544504 C18orf15Q96N68 181 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
YBX3-215ENST00000544504 EDA2RQ9HAV5 297 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 MRPL16Q9NX20 251 aaKnown RBP6.81□□□□□ -1.32
YBX3-215ENST00000544504 HECTD4Q9Y4D8 3996 aa6.81□□□□□ -1.32
YBX3-215ENST00000544504 DNAH10Q8IVF4 4471 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 TRAV4A0A0B4J268 109 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 RS1O15537 224 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 PPP1R17O96001 155 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 EVI2AP22794 236 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 FABP9Q0Z7S8 132 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 LINC00612Q8N6U2 182 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 C14orf178Q8N769 122 aaPredicted RBP6.8□□□□□ -1.32
YBX3-215ENST00000544504 OR4C5Q8NGB2 326 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 MRAP2Q96G30 205 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 MSRB1Q9NZV6 116 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 DKK2Q9UBU2 259 aa6.8□□□□□ -1.32
YBX3-215ENST00000544504 ABCA13Q86UQ4 5058 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 GAGE12BA1L429 117 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 C1orf196B1AJZ1 125 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 H7C1H1 209 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 GAGE7O76087 117 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 GAGE12FP0CL80 117 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 GAGE12GP0CL81 117 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 GAGE12IP0CL82 117 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 DAD1P61803 113 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 FAM222AQ5U5X8 452 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 Q6ZTI0 123 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 LAMTOR2Q9Y2Q5 125 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 MUC4Q99102 2169 aa6.79□□□□□ -1.32
YBX3-215ENST00000544504 F5H697 171 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 CRYGDP07320 174 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 MGPP08493 103 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 RAB4AP20338 218 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 CKS2P33552 79 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 SLAQ13239 276 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 FAM74A4Q5TZK3 123 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 CFAP126Q5VTH2 177 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 AMN1Q8IY45 258 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 ORMDL3Q8N138 153 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 POM121L12Q8N7R1 296 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 RETNQ9HD89 108 aa6.78□□□□□ -1.32
YBX3-215ENST00000544504 A0A087WWL8 130 aa6.77□□□□□ -1.33
YBX3-215ENST00000544504 PHOX2AO14813 284 aa6.77□□□□□ -1.33
YBX3-215ENST00000544504 TRGC2P03986 189 aa6.77□□□□□ -1.33
YBX3-215ENST00000544504 DEFB130BP0DP73 79 aa6.77□□□□□ -1.33
YBX3-215ENST00000544504 DEFB130AP0DP74 79 aa6.77□□□□□ -1.33
YBX3-215ENST00000544504 RAB5BP61020 215 aa6.77□□□□□ -1.33
YBX3-215ENST00000544504 ZNF56Q15929 161 aa6.77□□□□□ -1.33
YBX3-215ENST00000544504 KIF25-AS1Q9Y6Z4 181 aa6.77□□□□□ -1.33
YBX3-215ENST00000544504 TRGV4A0A0C4DH28 118 aa6.76□□□□□ -1.33
YBX3-215ENST00000544504 DEFB4AO15263 64 aa6.76□□□□□ -1.33
YBX3-215ENST00000544504 IGHV3-53P01767 116 aa6.76□□□□□ -1.33
YBX3-215ENST00000544504 ATP5G1P05496 136 aa6.76□□□□□ -1.33
YBX3-215ENST00000544504 MRPL51Q4U2R6 128 aaKnown RBP6.76□□□□□ -1.33
YBX3-215ENST00000544504 RNF185Q96GF1 192 aa6.76□□□□□ -1.33
YBX3-215ENST00000544504 PRELID3AQ96N28 172 aa6.76□□□□□ -1.33
YBX3-215ENST00000544504 JPT2Q9H910 190 aa6.76□□□□□ -1.33
YBX3-215ENST00000544504 A0A0J9YWU9 116 aa6.75□□□□□ -1.33
YBX3-215ENST00000544504 TRBV10-1A0A0K0K1A3 114 aa6.75□□□□□ -1.33
YBX3-215ENST00000544504 D6R8Y8 96 aa6.75□□□□□ -1.33
YBX3-215ENST00000544504 LINC00315P59091 139 aa6.75□□□□□ -1.33
YBX3-215ENST00000544504 UFSP1Q6NVU6 142 aa6.75□□□□□ -1.33
YBX3-215ENST00000544504 DNAJC30Q96LL9 226 aa6.75□□□□□ -1.33
YBX3-215ENST00000544504 SAMD10Q9BYL1 202 aa6.75□□□□□ -1.33
YBX3-215ENST00000544504 KMT2AQ03164 3969 aa6.74□□□□□ -1.33
YBX3-215ENST00000544504 TRBV6-4A0A1B0GX49 114 aa6.74□□□□□ -1.33
YBX3-215ENST00000544504 RHOHQ15669 191 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms