RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 DEFB1P60022 68 aa9.25□□□□□ -0.93
LRTOMT-221ENST00000544409 PPDPFLQ8WWR9 84 aa9.25□□□□□ -0.93
LRTOMT-221ENST00000544409 FAM19A4Q96LR4 140 aa9.25□□□□□ -0.93
LRTOMT-221ENST00000544409 DOPEY1Q5JWR5 2465 aa9.25□□□□□ -0.93
LRTOMT-221ENST00000544409 GAGE12JA6NER3 117 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 LINC01549A6NIU2 74 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 K7EMT4 169 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 GAGE7O76087 117 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 GAGE12FP0CL80 117 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 GAGE12GP0CL81 117 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 GAGE12IP0CL82 117 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 GAGE4Q13068 117 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 DEFB112Q30KQ8 113 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 F6UB75 175 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 RNASE4P34096 147 aaKnown RBP9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 LAGE3Q14657 143 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 TAL2Q16559 108 aa9.24□□□□□ -0.93
LRTOMT-221ENST00000544409 ZFHX3Q15911 3703 aa9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 IGHV4-59P01825 116 aa9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 MED14OSP0DP75 135 aa9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 ID1P41134 155 aa9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 PSMG4Q5JS54 123 aa9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 APRG1Q8IVJ8 170 aa9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 TRBV7-3A0A075B6L6 115 aa9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 M0R381 172 aa9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 ATP5LO75964 103 aa9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 PHLDA3Q9Y5J5 127 aa9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.23□□□□□ -0.93
LRTOMT-221ENST00000544409 SPG11Q96JI7 2443 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 ZNF688P0C7X2 276 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 PSMB8P28062 276 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 TEN1Q86WV5 123 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 J3QLI3 93 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 SRD5A1P18405 259 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 GAGE2BQ13066 116 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 GAGE2EQ4V326 116 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 GAGE2DQ9UEU5 116 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 NDUFV3P56181 108 aaKnown RBP9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 MYOZ3Q8TDC0 251 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 DPH3P1Q9H4G8 78 aa9.22□□□□□ -0.93
LRTOMT-221ENST00000544409 CFAP46Q8IYW2 2715 aa9.21□□□□□ -0.93
LRTOMT-221ENST00000544409 TTC32Q5I0X7 151 aa9.21□□□□□ -0.93
LRTOMT-221ENST00000544409 VPS13CQ709C8 3753 aa9.21□□□□□ -0.94
LRTOMT-221ENST00000544409 TMEM89A2RUT3 159 aa9.21□□□□□ -0.94
LRTOMT-221ENST00000544409 USP24Q9UPU5 2620 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 TRAV4A0A0B4J268 109 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 HLA-DRB4P13762 266 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 EDN2P20800 178 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 SMIM2Q9BVW6 85 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 HLA-DRB4X5D2U9 266 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 SPRY2O43597 315 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 COX6B1P14854 86 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 A0A096LNT2 108 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 RHODO00212 210 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 GNRH2O43555 120 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 C14orf178Q8N769 122 aaPredicted RBP9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 CITED1Q99966 193 aa9.2□□□□□ -0.94
LRTOMT-221ENST00000544409 CRLF1O75462 422 aa9.19□□□□□ -0.94
LRTOMT-221ENST00000544409 DCANP1Q8TF63 244 aa9.19□□□□□ -0.94
LRTOMT-221ENST00000544409 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
LRTOMT-221ENST00000544409 COL12A1Q99715 3063 aa9.19□□□□□ -0.94
LRTOMT-221ENST00000544409 CELSR1Q9NYQ6 3014 aa9.19□□□□□ -0.94
LRTOMT-221ENST00000544409 IGSF10Q6WRI0 2623 aa9.19□□□□□ -0.94
LRTOMT-221ENST00000544409 A8MWV9 139 aa9.19□□□□□ -0.94
LRTOMT-221ENST00000544409 MGPP08493 103 aa9.19□□□□□ -0.94
LRTOMT-221ENST00000544409 ANKRD29Q8N6D5 301 aa9.19□□□□□ -0.94
LRTOMT-221ENST00000544409 USP9XQ93008 2570 aaPredicted RBP9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 MYMXA0A1B0GTQ4 84 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 KLLNB2CW77 178 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 SNCGO76070 127 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 RNASE3P12724 160 aaKnown RBP9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 SUMO2P61956 95 aaKnown RBP9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 FAM159AQ6UWV7 190 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 C3orf56Q8N813 242 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 RASL10AQ92737 203 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 TCL1BO95988 128 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 SRSF9Q13242 221 aaKnown RBP eCLIP9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 ORMDL2Q53FV1 153 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 C10orf99Q6UWK7 81 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 TMEM262E9PQX1 116 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 IFITM1P13164 125 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 MAPK1IP1LQ8NDC0 245 aa9.18□□□□□ -0.94
LRTOMT-221ENST00000544409 CSPG4Q6UVK1 2322 aa9.17□□□□□ -0.94
LRTOMT-221ENST00000544409 A0A087WX48 190 aa9.17□□□□□ -0.94
LRTOMT-221ENST00000544409 PRB1P04280 392 aa9.17□□□□□ -0.94
LRTOMT-221ENST00000544409 VCX2Q9H322 139 aa9.17□□□□□ -0.94
LRTOMT-221ENST00000544409 VPREB3Q9UKI3 123 aa9.17□□□□□ -0.94
LRTOMT-221ENST00000544409 NXPH4O95158 308 aa9.16□□□□□ -0.94
LRTOMT-221ENST00000544409 PPP1R17O96001 155 aa9.16□□□□□ -0.94
LRTOMT-221ENST00000544409 SCGB1C2P0DMR2 95 aa9.16□□□□□ -0.94
LRTOMT-221ENST00000544409 SCGB1D4Q6XE38 83 aa9.16□□□□□ -0.94
LRTOMT-221ENST00000544409 RPL39LQ96EH5 51 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-221ENST00000544409 FLNCQ14315 2725 aa9.16□□□□□ -0.94
LRTOMT-221ENST00000544409 LGALS1P09382 135 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-221ENST00000544409 RAX2Q96IS3 184 aa9.16□□□□□ -0.94
LRTOMT-221ENST00000544409 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
LRTOMT-221ENST00000544409 SNRPD3P62318 126 aaKnown RBP9.15□□□□□ -0.94
LRTOMT-221ENST00000544409 TOMM6Q96B49 74 aa9.15□□□□□ -0.95
LRTOMT-221ENST00000544409 ODF3Q96PU9 254 aa9.15□□□□□ -0.95
LRTOMT-221ENST00000544409 TRAV12-3A0A0B4J271 114 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms