RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 C21orf62-AS1Q17RA5 79 aa12.64□□□□□ -0.39
PTPRO-209ENST00000543886 Q8N1Y9 231 aa12.64□□□□□ -0.39
PTPRO-209ENST00000543886 RASL10AQ92737 203 aa12.64□□□□□ -0.39
PTPRO-209ENST00000543886 C9orf85Q96MD7 179 aa12.64□□□□□ -0.39
PTPRO-209ENST00000543886 C20orf78Q9BR46 151 aa12.64□□□□□ -0.39
PTPRO-209ENST00000543886 NUDT3O95989 172 aa12.63□□□□□ -0.39
PTPRO-209ENST00000543886 PPP1R17O96001 155 aa12.63□□□□□ -0.39
PTPRO-209ENST00000543886 SUMO2P61956 95 aaKnown RBP12.63□□□□□ -0.39
PTPRO-209ENST00000543886 FHL3Q13643 280 aa12.63□□□□□ -0.39
PTPRO-209ENST00000543886 BVES-AS1Q5T3Y7 98 aa12.63□□□□□ -0.39
PTPRO-209ENST00000543886 SYT8Q8NBV8 401 aa12.63□□□□□ -0.39
PTPRO-209ENST00000543886 LINC01006Q8NI28 216 aa12.63□□□□□ -0.39
PTPRO-209ENST00000543886 CD300EQ496F6 205 aaPredicted RBP12.63□□□□□ -0.39
PTPRO-209ENST00000543886 RPL39LQ96EH5 51 aaKnown RBP12.63□□□□□ -0.39
PTPRO-209ENST00000543886 CITED2Q99967 270 aaPredicted RBP12.63□□□□□ -0.39
PTPRO-209ENST00000543886 TMEM160Q9NX00 188 aa12.63□□□□□ -0.39
PTPRO-209ENST00000543886 TSSC4Q9Y5U2 329 aaPredicted RBP12.63□□□□□ -0.39
PTPRO-209ENST00000543886 AGRNO00468 2067 aa12.63□□□□□ -0.39
PTPRO-209ENST00000543886 MUC4Q99102 2169 aa12.62□□□□□ -0.39
PTPRO-209ENST00000543886 H3BMM0 161 aa12.62□□□□□ -0.39
PTPRO-209ENST00000543886 POM121L12Q8N7R1 296 aa12.62□□□□□ -0.39
PTPRO-209ENST00000543886 SPAG8Q99932 426 aaPredicted RBP12.62□□□□□ -0.39
PTPRO-209ENST00000543886 MAP6D1Q9H9H5 199 aa12.62□□□□□ -0.39
PTPRO-209ENST00000543886 MDFICQ9P1T7 246 aa12.62□□□□□ -0.39
PTPRO-209ENST00000543886 TRGV11A0A075B6L2 103 aa12.61□□□□□ -0.39
PTPRO-209ENST00000543886 KIF25-AS1Q9Y6Z4 181 aa12.61□□□□□ -0.39
PTPRO-209ENST00000543886 A8MTW9 85 aa12.61□□□□□ -0.39
PTPRO-209ENST00000543886 TAX1BP3O14907 124 aa12.61□□□□□ -0.39
PTPRO-209ENST00000543886 HILS1P60008 231 aa12.61□□□□□ -0.39
PTPRO-209ENST00000543886 ATP5LO75964 103 aa12.6□□□□□ -0.39
PTPRO-209ENST00000543886 JPT2Q9H910 190 aa12.6□□□□□ -0.39
PTPRO-209ENST00000543886 A0A087WWL8 130 aa12.6□□□□□ -0.39
PTPRO-209ENST00000543886 TRAV25A0A0B4J276 109 aa12.6□□□□□ -0.39
PTPRO-209ENST00000543886 CBY3A6NI87 242 aa12.6□□□□□ -0.39
PTPRO-209ENST00000543886 ORMDL2Q53FV1 153 aa12.6□□□□□ -0.39
PTPRO-209ENST00000543886 F5H697 171 aa12.59□□□□□ -0.39
PTPRO-209ENST00000543886 PRSS1P07477 247 aa12.59□□□□□ -0.39
PTPRO-209ENST00000543886 LINC00315P59091 139 aa12.59□□□□□ -0.39
PTPRO-209ENST00000543886 SMR3AQ99954 134 aa12.59□□□□□ -0.39
PTPRO-209ENST00000543886 TP73-AS1Q9UF72 201 aa12.59□□□□□ -0.39
PTPRO-209ENST00000543886 RBMY1BA6NDE4 496 aaKnown RBP12.58□□□□□ -0.39
PTPRO-209ENST00000543886 RBMY1EA6NEQ0 496 aaKnown RBP12.58□□□□□ -0.39
PTPRO-209ENST00000543886 K7EMI3 77 aa12.58□□□□□ -0.39
PTPRO-209ENST00000543886 RBMY1DP0C7P1 496 aaKnown RBP12.58□□□□□ -0.39
PTPRO-209ENST00000543886 RBMY1A1P0DJD3 496 aaKnown RBP12.58□□□□□ -0.4
PTPRO-209ENST00000543886 RBMY1CP0DJD4 496 aa12.58□□□□□ -0.4
PTPRO-209ENST00000543886 RBMY1FQ15415 496 aaKnown RBP12.58□□□□□ -0.4
PTPRO-209ENST00000543886 SUMO4Q6EEV6 95 aa12.58□□□□□ -0.4
PTPRO-209ENST00000543886 ZNF256Q9Y2P7 627 aaPredicted RBP12.58□□□□□ -0.4
PTPRO-209ENST00000543886 NOTCH2Q04721 2471 aa12.57□□□□□ -0.4
PTPRO-209ENST00000543886 COX8AP10176 69 aa12.57□□□□□ -0.4
PTPRO-209ENST00000543886 FAM74A4Q5TZK3 123 aa12.57□□□□□ -0.4
PTPRO-209ENST00000543886 MTORP42345 2549 aa12.57□□□□□ -0.4
PTPRO-209ENST00000543886 JMJD8Q96S16 334 aa12.57□□□□□ -0.4
PTPRO-209ENST00000543886 CSTL1Q9H114 145 aa12.57□□□□□ -0.4
PTPRO-209ENST00000543886 DKK2Q9UBU2 259 aa12.57□□□□□ -0.4
PTPRO-209ENST00000543886 NF1P21359 2839 aa12.57□□□□□ -0.4
PTPRO-209ENST00000543886 SORL1Q92673 2214 aa12.56□□□□□ -0.4
PTPRO-209ENST00000543886 HTN1P15515 57 aa12.56□□□□□ -0.4
PTPRO-209ENST00000543886 CUBNO60494 3623 aa12.55□□□□□ -0.4
PTPRO-209ENST00000543886 NDUFA7O95182 113 aa12.55□□□□□ -0.4
PTPRO-209ENST00000543886 ODF1Q14990 250 aa12.55□□□□□ -0.4
PTPRO-209ENST00000543886 ZNF876PQ49A33 203 aa12.55□□□□□ -0.4
PTPRO-209ENST00000543886 ZNF56Q15929 161 aa12.55□□□□□ -0.4
PTPRO-209ENST00000543886 SEC11AP67812 179 aa12.54□□□□□ -0.4
PTPRO-209ENST00000543886 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.53□□□□□ -0.4
PTPRO-209ENST00000543886 LY6G6DO95868 133 aa12.53□□□□□ -0.4
PTPRO-209ENST00000543886 RPL32P62910 135 aaKnown RBP12.53□□□□□ -0.4
PTPRO-209ENST00000543886 ODF3L2Q3SX64 289 aa12.53□□□□□ -0.4
PTPRO-209ENST00000543886 ANKRD39Q53RE8 183 aa12.53□□□□□ -0.4
PTPRO-209ENST00000543886 TOMM6Q96B49 74 aa12.53□□□□□ -0.4
PTPRO-209ENST00000543886 INSP01308 110 aa12.53□□□□□ -0.4
PTPRO-209ENST00000543886 AMMECR1LQ6DCA0 310 aa12.53□□□□□ -0.4
PTPRO-209ENST00000543886 ERASQ7Z444 233 aa12.53□□□□□ -0.4
PTPRO-209ENST00000543886 CRYGDP07320 174 aa12.52□□□□□ -0.4
PTPRO-209ENST00000543886 COTL1Q14019 142 aa12.52□□□□□ -0.4
PTPRO-209ENST00000543886 SCGB3A1Q96QR1 104 aa12.52□□□□□ -0.4
PTPRO-209ENST00000543886 CST9LQ9H4G1 147 aa12.52□□□□□ -0.4
PTPRO-209ENST00000543886 ANK3Q12955 4377 aaKnown RBP12.52□□□□□ -0.41
PTPRO-209ENST00000543886 OR11H12B2RN74 326 aa12.52□□□□□ -0.41
PTPRO-209ENST00000543886 ZNF415Q09FC8 603 aa12.52□□□□□ -0.41
PTPRO-209ENST00000543886 RNF151Q2KHN1 245 aa12.52□□□□□ -0.41
PTPRO-209ENST00000543886 C2orf91Q6ZV80 131 aa12.52□□□□□ -0.41
PTPRO-209ENST00000543886 NEGR1Q7Z3B1 354 aa12.52□□□□□ -0.41
PTPRO-209ENST00000543886 STHQ8IWL8 128 aa12.52□□□□□ -0.41
PTPRO-209ENST00000543886 CLUHP3Q96NS8 147 aa12.52□□□□□ -0.41
PTPRO-209ENST00000543886 ZMAT4Q9H898 229 aa12.52□□□□□ -0.41
PTPRO-209ENST00000543886 SAP30O75446 220 aa12.51□□□□□ -0.41
PTPRO-209ENST00000543886 DPM2O94777 84 aa12.51□□□□□ -0.41
PTPRO-209ENST00000543886 IGKCP01834 107 aa12.51□□□□□ -0.41
PTPRO-209ENST00000543886 C2orf66Q6UXQ4 117 aa12.51□□□□□ -0.41
PTPRO-209ENST00000543886 LINC01587Q99440 93 aa12.51□□□□□ -0.41
PTPRO-209ENST00000543886 VCYO14598 125 aa12.5□□□□□ -0.41
PTPRO-209ENST00000543886 PROK1P58294 105 aa12.5□□□□□ -0.41
PTPRO-209ENST00000543886 NSUN5P1Q3KNT7 163 aa12.5□□□□□ -0.41
PTPRO-209ENST00000543886 TMEM97Q5BJF2 176 aa12.5□□□□□ -0.41
PTPRO-209ENST00000543886 KIR2DL4Q99706 377 aa12.5□□□□□ -0.41
PTPRO-209ENST00000543886 OTOGQ6ZRI0 2925 aa12.5□□□□□ -0.41
PTPRO-209ENST00000543886 POLR2KP53803 58 aaKnown RBP12.5□□□□□ -0.41
PTPRO-209ENST00000543886 TCTAP57738 103 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms