RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	TRGC1	P0CF51	173 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	HOXA5	P20719	270 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	FAM3B	P58499	235 aa	Predicted RBP	7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	SLA	Q13239	276 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	RHEB	Q15382	184 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	KCNIP4	Q6PIL6	250 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	SAMD10	Q9BYL1	202 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	HHLA3	Q9XRX5	114 aa		7.17	□□□□□ -1.26
CPSF7-221	ENST00000543545	IGHV4-4	A0A075B6R2	117 aa		7.16	□□□□□ -1.26
CPSF7-221	ENST00000543545	TRAV26-1	A0A087WT03	109 aa		7.16	□□□□□ -1.26
CPSF7-221	ENST00000543545		A0A0J9YY99	117 aa		7.16	□□□□□ -1.26
CPSF7-221	ENST00000543545	RHOD	O00212	210 aa		7.16	□□□□□ -1.26
CPSF7-221	ENST00000543545	CIDEA	O60543	219 aa		7.16	□□□□□ -1.26
CPSF7-221	ENST00000543545	MGP	P08493	103 aa		7.16	□□□□□ -1.26
CPSF7-221	ENST00000543545	S100P	P25815	95 aa		7.16	□□□□□ -1.26
CPSF7-221	ENST00000543545	CAMP	P49913	170 aa		7.16	□□□□□ -1.26
CPSF7-221	ENST00000543545	FHL2	Q14192	279 aa		7.16	□□□□□ -1.26
CPSF7-221	ENST00000543545	MRPL54	Q6P161	138 aa	Known RBP	7.16	□□□□□ -1.26
CPSF7-221	ENST00000543545	TG	P01266	2768 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545		A0A087WWC5	75 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	C3orf84	H3BNL1	204 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	PAX4	O43316	350 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	CRYGD	P07320	174 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	EVI2A	P22794	236 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	ZNF56	Q15929	161 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	TMEM88	Q6PEY1	159 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	ZFP2	Q6ZN57	461 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	IMMP2L	Q96T52	175 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	CNFN	Q9BYD5	112 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	PRO0255	Q9UI72	69 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	URGCP-MRPS24	S4R325	110 aa		7.15	□□□□□ -1.26
CPSF7-221	ENST00000543545	COL7A1	Q02388	2944 aa		7.14	□□□□□ -1.27
CPSF7-221	ENST00000543545	NUDT3	O95989	172 aa		7.14	□□□□□ -1.27
CPSF7-221	ENST00000543545	S100A8	P05109	93 aa		7.14	□□□□□ -1.27
CPSF7-221	ENST00000543545	BTF3L4	Q96K17	158 aa		7.14	□□□□□ -1.27
CPSF7-221	ENST00000543545	PRADC1	Q9BSG0	188 aa		7.14	□□□□□ -1.27
CPSF7-221	ENST00000543545	DPH3P1	Q9H4G8	78 aa		7.14	□□□□□ -1.27
CPSF7-221	ENST00000543545	TMEM242	Q9NWH2	141 aa		7.14	□□□□□ -1.27
CPSF7-221	ENST00000543545		A0A1B0GW15	77 aa		7.13	□□□□□ -1.27
CPSF7-221	ENST00000543545	GATA1	P15976	413 aa	Predicted RBP	7.13	□□□□□ -1.27
CPSF7-221	ENST00000543545	CRYBA4	P53673	196 aa		7.13	□□□□□ -1.27
CPSF7-221	ENST00000543545	RAB4B	P61018	213 aa		7.13	□□□□□ -1.27
CPSF7-221	ENST00000543545	HBB	P68871	147 aa		7.13	□□□□□ -1.27
CPSF7-221	ENST00000543545	UFSP1	Q6NVU6	142 aa		7.13	□□□□□ -1.27
CPSF7-221	ENST00000543545		Q6ZSN1	163 aa		7.13	□□□□□ -1.27
CPSF7-221	ENST00000543545	SLC25A29	Q8N8R3	303 aa		7.13	□□□□□ -1.27
CPSF7-221	ENST00000543545	FAM210B	Q96KR6	192 aa		7.13	□□□□□ -1.27
CPSF7-221	ENST00000543545	TRBV6-4	A0A1B0GX49	114 aa		7.12	□□□□□ -1.27
CPSF7-221	ENST00000543545		K7EQD1	137 aa		7.12	□□□□□ -1.27
CPSF7-221	ENST00000543545	GYPE	P15421	78 aa		7.12	□□□□□ -1.27
CPSF7-221	ENST00000543545	RHOH	Q15669	191 aa		7.12	□□□□□ -1.27
CPSF7-221	ENST00000543545	CASC10	Q5T4H9	136 aa		7.12	□□□□□ -1.27
CPSF7-221	ENST00000543545	ATRAID	Q6UW56	229 aa		7.12	□□□□□ -1.27
CPSF7-221	ENST00000543545	ATP5L2	Q7Z4Y8	100 aa		7.12	□□□□□ -1.27
CPSF7-221	ENST00000543545	KIF25-AS1	Q9Y6Z4	181 aa		7.12	□□□□□ -1.27
CPSF7-221	ENST00000543545	GAGE12J	A6NER3	117 aa		7.11	□□□□□ -1.27
CPSF7-221	ENST00000543545	GAGE1	Q13065	139 aa		7.11	□□□□□ -1.27
CPSF7-221	ENST00000543545	GAGE4	Q13068	117 aa		7.11	□□□□□ -1.27
CPSF7-221	ENST00000543545	GAGE5	Q13069	117 aa		7.11	□□□□□ -1.27
CPSF7-221	ENST00000543545	GAGE13	Q4V321	117 aa		7.11	□□□□□ -1.27
CPSF7-221	ENST00000543545	C15orf53	Q8NAA6	179 aa		7.11	□□□□□ -1.27
CPSF7-221	ENST00000543545	VSIG2	Q96IQ7	327 aa		7.11	□□□□□ -1.27
CPSF7-221	ENST00000543545	TMEM191A	Q9H0A3	160 aa		7.11	□□□□□ -1.27
CPSF7-221	ENST00000543545	ICOS	Q9Y6W8	199 aa		7.11	□□□□□ -1.27
CPSF7-221	ENST00000543545	MUC4	Q99102	2169 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	TRAV9-1	A0A075B6T8	112 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545		A0A096LPF7	62 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	LOC100131303	A0A0U1RQF7	123 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545		H7C1H1	209 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545		P0DMU3	169 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	FAM231A	P0DMU4	169 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	FAM231C	P0DMU5	169 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	SRI	P30626	198 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	TCTA	P57738	103 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	LINC00315	P59091	139 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	MRPL23	Q16540	153 aa	Known RBP	7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	SUMO4	Q6EEV6	95 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	AMN1	Q8IY45	258 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	SMCO4	Q9NRQ5	59 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	DNAH7	Q8WXX0	4024 aa		7.1	□□□□□ -1.27
CPSF7-221	ENST00000543545	TRAV26-2	A0A0B4J265	109 aa		7.09	□□□□□ -1.27
CPSF7-221	ENST00000543545		A0A1B0GXF2	115 aa		7.09	□□□□□ -1.27
CPSF7-221	ENST00000543545		H3BNG1	76 aa		7.09	□□□□□ -1.27
CPSF7-221	ENST00000543545	RPL36A	P83881	106 aa	Known RBP	7.09	□□□□□ -1.27
CPSF7-221	ENST00000543545	FAM104B	Q5XKR9	115 aa		7.09	□□□□□ -1.27
CPSF7-221	ENST00000543545	ZNRF2	Q8NHG8	242 aa		7.09	□□□□□ -1.27
CPSF7-221	ENST00000543545	RPL36AL	Q969Q0	106 aa	Known RBP	7.09	□□□□□ -1.27
CPSF7-221	ENST00000543545	APLN	Q9ULZ1	77 aa		7.09	□□□□□ -1.27
CPSF7-221	ENST00000543545	TNFRSF18	Q9Y5U5	241 aa		7.09	□□□□□ -1.27
CPSF7-221	ENST00000543545	TGIF2-C20orf24	A0A0A6YYL0	155 aa		7.08	□□□□□ -1.28
CPSF7-221	ENST00000543545	TRBV10-1	A0A0K0K1A3	114 aa		7.08	□□□□□ -1.28
CPSF7-221	ENST00000543545		M0QY20	66 aa		7.08	□□□□□ -1.28
CPSF7-221	ENST00000543545	ATP6V1G1	O75348	118 aa		7.08	□□□□□ -1.28
CPSF7-221	ENST00000543545	RAB4A	P20338	218 aa		7.08	□□□□□ -1.28
CPSF7-221	ENST00000543545	S100A1	P23297	94 aa		7.08	□□□□□ -1.28
CPSF7-221	ENST00000543545	RASL11A	Q6T310	242 aa		7.08	□□□□□ -1.28
CPSF7-221	ENST00000543545	NEGR1	Q7Z3B1	354 aa		7.08	□□□□□ -1.28
CPSF7-221	ENST00000543545	CBLN2	Q8IUK8	224 aa		7.08	□□□□□ -1.28
CPSF7-221	ENST00000543545	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7.08	□□□□□ -1.28
CPSF7-221	ENST00000543545	RNF185	Q96GF1	192 aa		7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms