RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 PRR15LQ9BU68 103 aa15.22■□□□□ 0.03
HDAC4-215ENST00000543185 TRBV12-3P01733 135 aa15.22■□□□□ 0.03
HDAC4-215ENST00000543185 CFHR3Q02985 330 aa15.22■□□□□ 0.03
HDAC4-215ENST00000543185 IGF2BP2-AS1Q96M15 143 aa15.22■□□□□ 0.03
HDAC4-215ENST00000543185 TRAV26-1A0A087WT03 109 aa15.22■□□□□ 0.03
HDAC4-215ENST00000543185 FAM240AA0A1B0GVK7 77 aa15.22■□□□□ 0.03
HDAC4-215ENST00000543185 TRBV7-3A0A075B6L6 115 aa15.22■□□□□ 0.03
HDAC4-215ENST00000543185 IGHV3-38A0A0C4DH36 116 aa15.22■□□□□ 0.03
HDAC4-215ENST00000543185 IGKV3D-7A0A0C4DH55 119 aa15.22■□□□□ 0.03
HDAC4-215ENST00000543185 BUB3O43684 328 aa15.21■□□□□ 0.03
HDAC4-215ENST00000543185 HIST2H2BCQ6DN03 193 aa15.21■□□□□ 0.03
HDAC4-215ENST00000543185 ZNF491Q8N8L2 437 aa15.21■□□□□ 0.03
HDAC4-215ENST00000543185 Q0VFX4 171 aa15.21■□□□□ 0.03
HDAC4-215ENST00000543185 VWCEQ96DN2 955 aa15.21■□□□□ 0.03
HDAC4-215ENST00000543185 CGB7P0DN87 165 aa15.21■□□□□ 0.03
HDAC4-215ENST00000543185 Q8NFD4 153 aa15.21■□□□□ 0.03
HDAC4-215ENST00000543185 NDUFC2-KCTD14E9PQ53 114 aa15.2■□□□□ 0.02
HDAC4-215ENST00000543185 FXYD2P54710 66 aa15.2■□□□□ 0.02
HDAC4-215ENST00000543185 DKK4Q9UBT3 224 aa15.2■□□□□ 0.02
HDAC4-215ENST00000543185 K7ERS5 55 aa15.2■□□□□ 0.02
HDAC4-215ENST00000543185 RNF144BQ7Z419 303 aa15.2■□□□□ 0.02
HDAC4-215ENST00000543185 WIPF3A6NGB9 483 aa15.19■□□□□ 0.02
HDAC4-215ENST00000543185 WFDC2Q14508 124 aa15.19■□□□□ 0.02
HDAC4-215ENST00000543185 SPATA12Q7Z6I5 190 aa15.19■□□□□ 0.02
HDAC4-215ENST00000543185 RS1O15537 224 aa15.19■□□□□ 0.02
HDAC4-215ENST00000543185 DEFB121Q5J5C9 76 aa15.19■□□□□ 0.02
HDAC4-215ENST00000543185 UPK3BQ9BT76 320 aa15.19■□□□□ 0.02
HDAC4-215ENST00000543185 COL8A2P25067 703 aa15.19■□□□□ 0.02
HDAC4-215ENST00000543185 IMUPQ9GZP8 106 aa15.19■□□□□ 0.02
HDAC4-215ENST00000543185 TLN2Q9Y4G6 2542 aa15.18■□□□□ 0.02
HDAC4-215ENST00000543185 E7EQL1 145 aa15.18■□□□□ 0.02
HDAC4-215ENST00000543185 GP9P14770 177 aa15.18■□□□□ 0.02
HDAC4-215ENST00000543185 NDUFA11Q86Y39 141 aa15.18■□□□□ 0.02
HDAC4-215ENST00000543185 DEFB105AQ8NG35 78 aa15.18■□□□□ 0.02
HDAC4-215ENST00000543185 IGLV3-1P01715 115 aa15.18■□□□□ 0.02
HDAC4-215ENST00000543185 TIRAPP58753 221 aa15.18■□□□□ 0.02
HDAC4-215ENST00000543185 RPL18AQ02543 176 aaKnown RBP15.18■□□□□ 0.02
HDAC4-215ENST00000543185 TRBV6-1A0A0K0K1D8 114 aa15.17■□□□□ 0.02
HDAC4-215ENST00000543185 RNASE13Q5GAN3 156 aaKnown RBP15.17■□□□□ 0.02
HDAC4-215ENST00000543185 Q6ZS92 163 aa15.17■□□□□ 0.02
HDAC4-215ENST00000543185 ZNF503Q96F45 646 aa15.17■□□□□ 0.02
HDAC4-215ENST00000543185 FAM236DA0A1B0GTK5 79 aa15.17■□□□□ 0.02
HDAC4-215ENST00000543185 FAM236CP0DP71 79 aa15.17■□□□□ 0.02
HDAC4-215ENST00000543185 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-215ENST00000543185 IGKV2-29A2NJV5 120 aaPredicted RBP15.17■□□□□ 0.02
HDAC4-215ENST00000543185 ODF1Q14990 250 aa15.17■□□□□ 0.02
HDAC4-215ENST00000543185 NOP10Q9NPE3 64 aaKnown RBP15.16■□□□□ 0.02
HDAC4-215ENST00000543185 C10orf105Q8TEF2 133 aa15.16■□□□□ 0.02
HDAC4-215ENST00000543185 C3orf22Q8N5N4 141 aa15.15■□□□□ 0.02
HDAC4-215ENST00000543185 NDUFA1O15239 70 aa15.15■□□□□ 0.02
HDAC4-215ENST00000543185 C3orf56Q8N813 242 aa15.15■□□□□ 0.02
HDAC4-215ENST00000543185 CAMK2N2Q96S95 79 aa15.15■□□□□ 0.02
HDAC4-215ENST00000543185 G3V318 75 aa15.15■□□□□ 0.02
HDAC4-215ENST00000543185 CDPF1Q6NVV7 123 aa15.15■□□□□ 0.02
HDAC4-215ENST00000543185 IGKV2D-24A0A075B6R9 120 aa15.14■□□□□ 0.01
HDAC4-215ENST00000543185 IGLV1-44P01699 117 aa15.14■□□□□ 0.01
HDAC4-215ENST00000543185 LOXP28300 417 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-215ENST00000543185 IGFL3Q6UXB1 125 aa15.14■□□□□ 0.01
HDAC4-215ENST00000543185 HIVEP3Q5T1R4 2406 aa15.14■□□□□ 0.01
HDAC4-215ENST00000543185 ZMAT4Q9H898 229 aa15.13■□□□□ 0.01
HDAC4-215ENST00000543185 LYRM9A8MSI8 78 aa15.13■□□□□ 0.01
HDAC4-215ENST00000543185 DIRC1Q969H9 104 aa15.13■□□□□ 0.01
HDAC4-215ENST00000543185 RPL39LQ96EH5 51 aaKnown RBP15.13■□□□□ 0.01
HDAC4-215ENST00000543185 MIAQ16674 131 aa15.13■□□□□ 0.01
HDAC4-215ENST00000543185 NPBQ8NG41 125 aa15.13■□□□□ 0.01
HDAC4-215ENST00000543185 TDRG1Q3Y452 100 aa15.13■□□□□ 0.01
HDAC4-215ENST00000543185 U3KQE9 123 aa15.13■□□□□ 0.01
HDAC4-215ENST00000543185 ANKRD39Q53RE8 183 aa15.13■□□□□ 0.01
HDAC4-215ENST00000543185 C9orf47Q6ZRZ4 202 aa15.13■□□□□ 0.01
HDAC4-215ENST00000543185 CLPSL2Q6UWE3 100 aa15.12■□□□□ 0.01
HDAC4-215ENST00000543185 AGPAT4-IT1Q9H0P7 198 aa15.12■□□□□ 0.01
HDAC4-215ENST00000543185 IGLV3-9A0A075B6K5 115 aa15.12■□□□□ 0.01
HDAC4-215ENST00000543185 ZFHX2Q9C0A1 2572 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-215ENST00000543185 FGF23Q9GZV9 251 aaPredicted RBP15.12■□□□□ 0.01
HDAC4-215ENST00000543185 WDR86Q86TI4 376 aa15.11■□□□□ 0.01
HDAC4-215ENST00000543185 VPREB3Q9UKI3 123 aa15.11■□□□□ 0.01
HDAC4-215ENST00000543185 SETD2Q9BYW2 2564 aaPredicted RBP15.11■□□□□ 0.01
HDAC4-215ENST00000543185 C5orf24Q7Z6I8 188 aa15.11■□□□□ 0.01
HDAC4-215ENST00000543185 LECT2O14960 151 aa15.1■□□□□ 0.01
HDAC4-215ENST00000543185 HOXB4P17483 251 aaPredicted RBP15.1■□□□□ 0.01
HDAC4-215ENST00000543185 SPTSSBQ8NFR3 76 aa15.09■□□□□ 0.01
HDAC4-215ENST00000543185 CRIPAKQ8N1N5 446 aa15.09■□□□□ 0.01
HDAC4-215ENST00000543185 GNRH2O43555 120 aa15.09■□□□□ 0.01
HDAC4-215ENST00000543185 NDUFA7O95182 113 aa15.09■□□□□ 0.01
HDAC4-215ENST00000543185 C16orf54Q6UWD8 224 aa15.09■□□□□ 0.01
HDAC4-215ENST00000543185 IGHV4-28A0A0C4DH34 117 aa15.08■□□□□ 0.01
HDAC4-215ENST00000543185 TEX22C9J3V5 150 aa15.08■□□□□ 0.01
HDAC4-215ENST00000543185 TLN1Q9Y490 2541 aaKnown RBP15.08■□□□□ 0
HDAC4-215ENST00000543185 RUSC1-AS1Q66K80 236 aa15.08■□□□□ 0
HDAC4-215ENST00000543185 TPSG1Q9NRR2 321 aa15.08■□□□□ 0
HDAC4-215ENST00000543185 MDFICQ9P1T7 246 aa15.08■□□□□ 0
HDAC4-215ENST00000543185 HIST2H2BDQ6DRA6 164 aa15.08■□□□□ 0
HDAC4-215ENST00000543185 TCL1BO95988 128 aa15.07■□□□□ 0
HDAC4-215ENST00000543185 GYPEP15421 78 aa15.07■□□□□ 0
HDAC4-215ENST00000543185 FANCD2OSQ96PS1 177 aa15.07■□□□□ 0
HDAC4-215ENST00000543185 PIEZO2Q9H5I5 2752 aa15.06■□□□□ 0
HDAC4-215ENST00000543185 ZNRD1Q9P1U0 126 aa15.06■□□□□ 0
HDAC4-215ENST00000543185 GTSF1Q8WW33 167 aa15.06■□□□□ 0
HDAC4-215ENST00000543185 CLEC2BQ92478 149 aa15.06■□□□□ 0
HDAC4-215ENST00000543185 WI2-2373I1.2A0A1W2PRP0 233 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms