RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 FABP9Q0Z7S8 132 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 FAM222AQ5U5X8 452 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 FAM104BQ5XKR9 115 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 AMN1Q8IY45 258 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 DPH3P1Q9H4G8 78 aa7.63□□□□□ -1.19
DDB1-221ENST00000543162 RS1O15537 224 aa7.62□□□□□ -1.19
DDB1-221ENST00000543162 TRGC2P03986 189 aa7.62□□□□□ -1.19
DDB1-221ENST00000543162 MGPP08493 103 aa7.62□□□□□ -1.19
DDB1-221ENST00000543162 SPART-AS1P0CW21 52 aa7.62□□□□□ -1.19
DDB1-221ENST00000543162 DEFB130BP0DP73 79 aa7.62□□□□□ -1.19
DDB1-221ENST00000543162 DEFB130AP0DP74 79 aa7.62□□□□□ -1.19
DDB1-221ENST00000543162 SLAQ13239 276 aa7.62□□□□□ -1.19
DDB1-221ENST00000543162 FAM74A4Q5TZK3 123 aa7.62□□□□□ -1.19
DDB1-221ENST00000543162 SAMD10Q9BYL1 202 aa7.62□□□□□ -1.19
DDB1-221ENST00000543162 C11orf68Q9H3H3 251 aaKnown RBP7.62□□□□□ -1.19
DDB1-221ENST00000543162 DKK2Q9UBU2 259 aa7.62□□□□□ -1.19
DDB1-221ENST00000543162 TRAV4A0A0B4J268 109 aa7.61□□□□□ -1.19
DDB1-221ENST00000543162 TEX48A0A1B0GUV7 120 aa7.61□□□□□ -1.19
DDB1-221ENST00000543162 RHODO00212 210 aa7.61□□□□□ -1.19
DDB1-221ENST00000543162 CRYGDP07320 174 aa7.61□□□□□ -1.19
DDB1-221ENST00000543162 RAB4AP20338 218 aa7.61□□□□□ -1.19
DDB1-221ENST00000543162 CFAP126Q5VTH2 177 aa7.61□□□□□ -1.19
DDB1-221ENST00000543162 LINC00612Q8N6U2 182 aa7.61□□□□□ -1.19
DDB1-221ENST00000543162 OR4C5Q8NGB2 326 aa7.61□□□□□ -1.19
DDB1-221ENST00000543162 RNF185Q96GF1 192 aa7.61□□□□□ -1.19
DDB1-221ENST00000543162 KIF25-AS1Q9Y6Z4 181 aa7.61□□□□□ -1.19
DDB1-221ENST00000543162 IGHV3-73A0A0B4J1V6 119 aa7.6□□□□□ -1.19
DDB1-221ENST00000543162 A0A0J9YWU9 116 aa7.6□□□□□ -1.19
DDB1-221ENST00000543162 F5H697 171 aa7.6□□□□□ -1.19
DDB1-221ENST00000543162 IGHV3-53P01767 116 aa7.6□□□□□ -1.19
DDB1-221ENST00000543162 LINC00315P59091 139 aa7.6□□□□□ -1.19
DDB1-221ENST00000543162 DAD1P61803 113 aa7.6□□□□□ -1.19
DDB1-221ENST00000543162 ZNF56Q15929 161 aa7.6□□□□□ -1.19
DDB1-221ENST00000543162 KIAA1644Q3SXP7 199 aa7.6□□□□□ -1.19
DDB1-221ENST00000543162 MRPL51Q4U2R6 128 aaKnown RBP7.6□□□□□ -1.19
DDB1-221ENST00000543162 POM121L12Q8N7R1 296 aa7.6□□□□□ -1.19
DDB1-221ENST00000543162 CELA1Q9UNI1 258 aa7.6□□□□□ -1.19
DDB1-221ENST00000543162 C1orf196B1AJZ1 125 aa7.59□□□□□ -1.19
DDB1-221ENST00000543162 CIDEAO60543 219 aa7.59□□□□□ -1.19
DDB1-221ENST00000543162 NHLRC4P0CG21 123 aaPredicted RBP7.59□□□□□ -1.19
DDB1-221ENST00000543162 CKS2P33552 79 aa7.59□□□□□ -1.19
DDB1-221ENST00000543162 UFSP1Q6NVU6 142 aa7.59□□□□□ -1.19
DDB1-221ENST00000543162 ZFP2Q6ZN57 461 aa7.59□□□□□ -1.19
DDB1-221ENST00000543162 MRAP2Q96G30 205 aa7.59□□□□□ -1.19
DDB1-221ENST00000543162 ZNF479Q96JC4 524 aa7.59□□□□□ -1.19
DDB1-221ENST00000543162 C18orf15Q96N68 181 aa7.59□□□□□ -1.19
DDB1-221ENST00000543162 NACAE9PAV3 2078 aa7.58□□□□□ -1.2
DDB1-221ENST00000543162 TRAV26-2A0A0B4J265 109 aa7.58□□□□□ -1.2
DDB1-221ENST00000543162 D6R8Y8 96 aa7.58□□□□□ -1.2
DDB1-221ENST00000543162 SMKR1H3BMG3 65 aa7.58□□□□□ -1.2
DDB1-221ENST00000543162 PPBPP02775 128 aa7.58□□□□□ -1.2
DDB1-221ENST00000543162 SUMO4Q6EEV6 95 aa7.58□□□□□ -1.2
DDB1-221ENST00000543162 ORMDL3Q8N138 153 aa7.58□□□□□ -1.2
DDB1-221ENST00000543162 TENM3Q9P273 2699 aa7.58□□□□□ -1.2
DDB1-221ENST00000543162 TRGV4A0A0C4DH28 118 aa7.57□□□□□ -1.2
DDB1-221ENST00000543162 PHOX2AO14813 284 aa7.57□□□□□ -1.2
DDB1-221ENST00000543162 NCR2O95944 276 aa7.57□□□□□ -1.2
DDB1-221ENST00000543162 SRIP30626 198 aa7.57□□□□□ -1.2
DDB1-221ENST00000543162 PRELID3AQ96N28 172 aa7.57□□□□□ -1.2
DDB1-221ENST00000543162 ALKBH7Q9BT30 221 aaPredicted RBP7.57□□□□□ -1.2
DDB1-221ENST00000543162 U3KQK5 164 aa7.57□□□□□ -1.2
DDB1-221ENST00000543162 H7C1H1 209 aa7.56□□□□□ -1.2
DDB1-221ENST00000543162 RAB5BP61020 215 aa7.56□□□□□ -1.2
DDB1-221ENST00000543162 C12orf74Q32Q52 190 aa7.56□□□□□ -1.2
DDB1-221ENST00000543162 Q6ZSN1 163 aa7.56□□□□□ -1.2
DDB1-221ENST00000543162 C11orf45Q8TAV5 145 aa7.56□□□□□ -1.2
DDB1-221ENST00000543162 MEGF8Q7Z7M0 2845 aa7.56□□□□□ -1.2
DDB1-221ENST00000543162 M0QY20 66 aa7.55□□□□□ -1.2
DDB1-221ENST00000543162 GAS8-AS1O95177 125 aa7.55□□□□□ -1.2
DDB1-221ENST00000543162 PPP1R17O96001 155 aa7.55□□□□□ -1.2
DDB1-221ENST00000543162 ATP5G1P05496 136 aa7.55□□□□□ -1.2
DDB1-221ENST00000543162 GATA1P15976 413 aaPredicted RBP7.55□□□□□ -1.2
DDB1-221ENST00000543162 FHL2Q14192 279 aa7.55□□□□□ -1.2
DDB1-221ENST00000543162 LAMTOR2Q9Y2Q5 125 aa7.55□□□□□ -1.2
DDB1-221ENST00000543162 HIST1H2BKO60814 126 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 TNFRSF6BO95407 300 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 NPYP01303 97 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 HIST1H2BJP06899 126 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 HTN3P15516 51 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 HIST1H2BOP23527 126 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 HIST1H2BBP33778 126 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 HIST1H2BDP58876 126 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 HIST1H2BCP62807 126 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 HIST2H2BEQ16778 126 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 OR10J3Q5JRS4 329 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.54□□□□□ -1.2
DDB1-221ENST00000543162 NRACQ8N912 160 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 HIST1H2BHQ93079 126 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 RPL39LQ96EH5 51 aaKnown RBP7.54□□□□□ -1.2
DDB1-221ENST00000543162 HIST1H2BNQ99877 126 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 HIST1H2BMQ99879 126 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 EDA2RQ9HAV5 297 aa7.54□□□□□ -1.2
DDB1-221ENST00000543162 TRBV6-4A0A1B0GX49 114 aa7.53□□□□□ -1.2
DDB1-221ENST00000543162 F5H768 121 aa7.53□□□□□ -1.2
DDB1-221ENST00000543162 K7EQD1 137 aa7.53□□□□□ -1.2
DDB1-221ENST00000543162 HOXA5P20719 270 aa7.53□□□□□ -1.2
DDB1-221ENST00000543162 NANOS2P60321 138 aaKnown RBP7.53□□□□□ -1.2
DDB1-221ENST00000543162 SLC25A29Q8N8R3 303 aa7.53□□□□□ -1.2
DDB1-221ENST00000543162 MAP1LC3AQ9H492 121 aa7.53□□□□□ -1.2
DDB1-221ENST00000543162 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms