RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 RPL18Q07020 188 aaKnown RBP2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 PMAIP1Q13794 54 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 SPATA12Q7Z6I5 190 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 OOSP2Q86WS3 158 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 OR8B3Q8NGG8 313 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 RTN4IP1Q8WWV3 396 aaPredicted RBP2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 LSM10Q969L4 123 aaKnown RBP2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 BORCS7Q96B45 105 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 ARHGAP5-AS1Q96IT6 56 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 OR8B2Q96RD0 313 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 SHANK2-AS3Q9BTD1 123 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 NAA60Q9H7X0 242 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 LINC00574Q9H8X3 128 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 PRTFDC1Q9NRG1 225 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 TAAR3PQ9P1P4 343 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 SOX21Q9Y651 276 aaPredicted RBP2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 R4GMQ9 66 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 COL6A5A8TX70 2615 aa2.48□□□□□ -2.01
SFSWAP-211ENST00000542813 FBN1P35555 2871 aaKnown RBP2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 SCN3AQ9NY46 2000 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 PTPRBP23467 1997 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 GTF3C1Q12789 2109 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 MPDZO75970 2070 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 IGLL5B9A064 214 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 C9JAW5 83 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 TMEM262E9PQX1 116 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 H3BUT2 72 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 CST7O76096 145 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 IGKV1D-33P01593 117 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 IGKV1-33P01594 117 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 MT-ATP8P03928 68 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 ASAH2BP0C7U1 165 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 RPL7P18124 248 aaKnown RBP2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 BLVRBP30043 206 aaPredicted RBP2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 G6PCP35575 357 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 MPV17P39210 176 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 LINC00313P59037 77 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 PSG4Q00888 419 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 ZNF816Q0VGE8 651 aaPredicted RBP2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 ZNF141Q15928 474 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 MEIG1Q5JSS6 88 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 DAZ4Q86SG3 579 aaKnown RBP2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 C1orf158Q8N1D5 194 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 SLC22A24Q8N4F4 322 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 OR5D14Q8NGL3 314 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 OR5P3Q8WZ94 311 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 ZC2HC1AQ96GY0 325 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 SMIM7Q9BQ49 75 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 DAZ1Q9NQZ3 744 aaKnown RBP2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 KCNIP2Q9NS61 270 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 HIGD1AQ9Y241 93 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 TNRC6BQ9UPQ9 1833 aaKnown RBP2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 THADAQ6YHU6 1953 aa2.47□□□□□ -2.01
SFSWAP-211ENST00000542813 MYOFQ9NZM1 2061 aa2.46□□□□□ -2.01
SFSWAP-211ENST00000542813 CSMD2Q7Z408 3487 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 ARID1AO14497 2285 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 IGHV3OR15-7A0A075B7D8 119 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 IGKV1D-43A0A0B4J1Z2 117 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 IGKV1-9A0A0C4DH69 117 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 OR4C46A6NHA9 309 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 C17orf51A8MQB3 221 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 SYS1-DBNDD2H3BUS1 97 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 SSSCA1O60232 199 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 KLF7O75840 302 aaPredicted RBP2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 IGLV3-19P01714 112 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 IL4P05112 153 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 SCTP09683 121 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 KRTAP1-4P0C5Y4 121 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 COX8AP10176 69 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 CBLN1P23435 193 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 ASIPP42127 132 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 EMP1P54849 157 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 UBE2G1P62253 170 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 WFDC2Q14508 124 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 PSMG4Q5JS54 123 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 FAM201AQ5SY85 155 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 UNQ9165/PRO28630Q6UXU0 137 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 Q6ZS49 121 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 BPIFA4PQ86YQ2 179 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 OR4X2Q8NGF9 303 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 OR5C1Q8NGR4 320 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 CT55Q8WUE5 264 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 COX14Q96I36 57 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 ZNF286AQ9HBT8 521 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 ZNF835Q9Y2P0 537 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 LHFPL6Q9Y693 200 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 SMAD5-AS1Q9Y6J3 95 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 TACC2O95359 2948 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 DOCK9Q9BZ29 2069 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 CSPG4Q6UVK1 2322 aa2.46□□□□□ -2.02
SFSWAP-211ENST00000542813 TMED7-TICAM2A0A0A6YYA0 188 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 C2orf70A6NJV1 201 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 GGTLC3B5MD39 225 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 H3BMG7 143 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 NPFFO15130 113 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 OR2H2O95918 312 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 IGHV3-7P01780 117 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 IGHMP01871 453 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 SMIM13P0DJ93 91 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms