RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 ZNF469Q96JG9 3925 aaPredicted RBP12.92□□□□□ -0.34
NELFA-216ENST00000542778 RBAKDNA6NC62 111 aa12.92□□□□□ -0.34
NELFA-216ENST00000542778 IGHV3-23P01764 117 aa12.92□□□□□ -0.34
NELFA-216ENST00000542778 FAM159AQ6UWV7 190 aa12.92□□□□□ -0.34
NELFA-216ENST00000542778 TRPT1Q86TN4 253 aaKnown RBP12.92□□□□□ -0.34
NELFA-216ENST00000542778 CCL19Q99731 98 aa12.92□□□□□ -0.34
NELFA-216ENST00000542778 ODF3BA8MYP8 253 aa12.91□□□□□ -0.34
NELFA-216ENST00000542778 BRI3O95415 125 aa12.91□□□□□ -0.34
NELFA-216ENST00000542778 C21orf62Q9NYP8 219 aa12.91□□□□□ -0.34
NELFA-216ENST00000542778 DPM3Q9P2X0 92 aa12.91□□□□□ -0.34
NELFA-216ENST00000542778 Q6ZQT7 251 aa12.91□□□□□ -0.34
NELFA-216ENST00000542778 Q8N1Y9 231 aa12.91□□□□□ -0.34
NELFA-216ENST00000542778 C11orf86A6NJI1 115 aa12.9□□□□□ -0.34
NELFA-216ENST00000542778 M0R1W7 72 aa12.9□□□□□ -0.34
NELFA-216ENST00000542778 SLC25A29Q8N8R3 303 aa12.9□□□□□ -0.34
NELFA-216ENST00000542778 AGPAT4-IT1Q9H0P7 198 aa12.9□□□□□ -0.34
NELFA-216ENST00000542778 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.34
NELFA-216ENST00000542778 CRYGDP07320 174 aa12.9□□□□□ -0.34
NELFA-216ENST00000542778 NTN5Q8WTR8 489 aaPredicted RBP12.9□□□□□ -0.34
NELFA-216ENST00000542778 ODF3Q96PU9 254 aa12.9□□□□□ -0.34
NELFA-216ENST00000542778 SIRPDQ9H106 197 aa12.9□□□□□ -0.34
NELFA-216ENST00000542778 IGHV3OR16-10A0A075B7F0 116 aa12.89□□□□□ -0.35
NELFA-216ENST00000542778 IGHV4-61A0A0C4DH41 118 aa12.89□□□□□ -0.35
NELFA-216ENST00000542778 RPL39LQ96EH5 51 aaKnown RBP12.89□□□□□ -0.35
NELFA-216ENST00000542778 IGLV4-69A0A075B6H9 119 aa12.89□□□□□ -0.35
NELFA-216ENST00000542778 TSPEAR-AS2P59090 65 aa12.89□□□□□ -0.35
NELFA-216ENST00000542778 TNFRSF18Q9Y5U5 241 aa12.89□□□□□ -0.35
NELFA-216ENST00000542778 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
NELFA-216ENST00000542778 NBR2O15453 112 aa12.88□□□□□ -0.35
NELFA-216ENST00000542778 HERVK_113P61574 105 aa12.88□□□□□ -0.35
NELFA-216ENST00000542778 HES1Q14469 280 aa12.88□□□□□ -0.35
NELFA-216ENST00000542778 CTSGP08311 255 aa12.88□□□□□ -0.35
NELFA-216ENST00000542778 EIF4EBP3O60516 100 aaPredicted RBP12.87□□□□□ -0.35
NELFA-216ENST00000542778 IGHV4-30-2A0A087WSY4 118 aa12.87□□□□□ -0.35
NELFA-216ENST00000542778 EMP1P54849 157 aa12.87□□□□□ -0.35
NELFA-216ENST00000542778 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.87□□□□□ -0.35
NELFA-216ENST00000542778 C15orf53Q8NAA6 179 aa12.87□□□□□ -0.35
NELFA-216ENST00000542778 IGHV3-33P01772 117 aa12.86□□□□□ -0.35
NELFA-216ENST00000542778 ATP5J2P56134 94 aa12.86□□□□□ -0.35
NELFA-216ENST00000542778 SPANXA1Q9NS26 97 aa12.86□□□□□ -0.35
NELFA-216ENST00000542778 TRAV8-4A0A0B4J246 113 aa12.86□□□□□ -0.35
NELFA-216ENST00000542778 DUSP14O95147 198 aaKnown RBP12.86□□□□□ -0.35
NELFA-216ENST00000542778 IGHV3-35A0A0C4DH35 117 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 TSHBP01222 138 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 P0DMU3 169 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 FAM231AP0DMU4 169 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 FAM231CP0DMU5 169 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 OR10J6PQ8NGY7 276 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 AMELXQ99217 191 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 APCP25054 2843 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 CSPG4Q6UVK1 2322 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 TEX49A0A1B0GTD5 131 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 A4D1N5 150 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 RPL13AP40429 203 aaKnown RBP12.85□□□□□ -0.35
NELFA-216ENST00000542778 PAPPA-AS1Q5QFB9 102 aa12.85□□□□□ -0.35
NELFA-216ENST00000542778 TMEM263Q8WUH6 116 aaKnown RBP12.85□□□□□ -0.35
NELFA-216ENST00000542778 MEIG1Q5JSS6 88 aa12.84□□□□□ -0.35
NELFA-216ENST00000542778 LINC01600Q96MT4 127 aa12.84□□□□□ -0.35
NELFA-216ENST00000542778 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
NELFA-216ENST00000542778 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.84□□□□□ -0.352e-7■■■■□ 20.7
NELFA-216ENST00000542778 ELANEP08246 267 aa12.84□□□□□ -0.35
NELFA-216ENST00000542778 KRTAP10-9P60411 292 aa12.84□□□□□ -0.35
NELFA-216ENST00000542778 NPBQ8NG41 125 aa12.84□□□□□ -0.35
NELFA-216ENST00000542778 DOPEY2Q9Y3R5 2298 aa12.83□□□□□ -0.36
NELFA-216ENST00000542778 SAA4P35542 130 aa12.83□□□□□ -0.36
NELFA-216ENST00000542778 NDPQ00604 133 aa12.83□□□□□ -0.36
NELFA-216ENST00000542778 LINC01620Q4KN68 170 aa12.83□□□□□ -0.36
NELFA-216ENST00000542778 C10orf105Q8TEF2 133 aa12.83□□□□□ -0.36
NELFA-216ENST00000542778 KMT2BQ9UMN6 2715 aaPredicted RBP12.83□□□□□ -0.36
NELFA-216ENST00000542778 M0R381 172 aa12.83□□□□□ -0.36
NELFA-216ENST00000542778 SPRY2O43597 315 aa12.83□□□□□ -0.36
NELFA-216ENST00000542778 C1orf122Q6ZSJ8 110 aa12.83□□□□□ -0.36
NELFA-216ENST00000542778 DPH3P1Q9H4G8 78 aa12.83□□□□□ -0.36
NELFA-216ENST00000542778 H7C2G1 150 aa12.82□□□□□ -0.36
NELFA-216ENST00000542778 BUB3O43684 328 aa12.82□□□□□ -0.36
NELFA-216ENST00000542778 SCGB2A1O75556 95 aa12.82□□□□□ -0.36
NELFA-216ENST00000542778 ATXN8Q156A1 80 aa12.82□□□□□ -0.36
NELFA-216ENST00000542778 BRD3OSQ6XYD6 125 aa12.82□□□□□ -0.36
NELFA-216ENST00000542778 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
NELFA-216ENST00000542778 PRR9Q5T870 116 aa12.81□□□□□ -0.36
NELFA-216ENST00000542778 MAPK1IP1LQ8NDC0 245 aa12.81□□□□□ -0.36
NELFA-216ENST00000542778 HIF1ANQ9NWT6 349 aa12.81□□□□□ -0.36
NELFA-216ENST00000542778 NAV2Q8IVL1 2488 aa12.81□□□□□ -0.36
NELFA-216ENST00000542778 A0A0B4J2C4 111 aa12.81□□□□□ -0.36
NELFA-216ENST00000542778 IGHV3-66A0A0C4DH42 116 aa12.81□□□□□ -0.36
NELFA-216ENST00000542778 CLEC3BP05452 202 aa12.81□□□□□ -0.36
NELFA-216ENST00000542778 PMVKQ15126 192 aa12.81□□□□□ -0.36
NELFA-216ENST00000542778 PIMREGQ9BSJ6 248 aa12.81□□□□□ -0.36
NELFA-216ENST00000542778 TRAV2A0A0B4J234 112 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 IGIPA6NJ69 53 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 J3QQQ9 107 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 MGPP08493 103 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 TMEM170BQ5T4T1 132 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 C9orf47Q6ZRZ4 202 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 TP53TG1Q9Y2A0 90 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 IGHV1-69DA0A0B4J2H0 117 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 H3BMM0 161 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 LGALS9O00182 355 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 ARL3P36405 182 aa12.8□□□□□ -0.36
NELFA-216ENST00000542778 UBE2WQ96B02 151 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms