RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 U3KQA8 63 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 H7C423 109 aa4.32□□□□□ -1.72
XRCC4-206ENST00000542685 GP9P14770 177 aa4.32□□□□□ -1.72
XRCC4-206ENST00000542685 NBL1P41271 181 aa4.32□□□□□ -1.72
XRCC4-206ENST00000542685 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
XRCC4-206ENST00000542685 SPINK9Q5DT21 86 aa4.32□□□□□ -1.72
XRCC4-206ENST00000542685 GUSBP11Q6P575 273 aa4.32□□□□□ -1.72
XRCC4-206ENST00000542685 Q6ZRU5 148 aa4.32□□□□□ -1.72
XRCC4-206ENST00000542685 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
XRCC4-206ENST00000542685 PRR15Q8IV56 129 aa4.32□□□□□ -1.72
XRCC4-206ENST00000542685 ZCCHC24Q8N2G6 241 aaKnown RBP4.32□□□□□ -1.72
XRCC4-206ENST00000542685 ZNF71Q9NQZ8 489 aaPredicted RBP4.32□□□□□ -1.72
XRCC4-206ENST00000542685 UTRNP46939 3433 aa4.32□□□□□ -1.72
XRCC4-206ENST00000542685 F5P12259 2224 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 BRCA2P51587 3418 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 IGKV1OR2-108A0A075B7D4 117 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 TRBV7-1A0A0A6YYK4 115 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 TRBV7-6A0A0J9YX20 115 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 TMEM223A0PJW6 202 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 TMEM89A2RUT3 159 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 EPOPA6NHQ4 379 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 C11orf86A6NJI1 115 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 FCGR3BO75015 233 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 LYZL6O75951 148 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 PPP1R17O96001 155 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 IGHV3-13P01766 116 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 RNASE2P10153 161 aaKnown RBP4.31□□□□□ -1.72
XRCC4-206ENST00000542685 DLX1P56177 255 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 ERHP84090 104 aaKnown RBP4.31□□□□□ -1.72
XRCC4-206ENST00000542685 Q1RN00 199 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 S100A7L2Q5SY68 101 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 FAM53AQ6NSI3 398 aaPredicted RBP4.31□□□□□ -1.72
XRCC4-206ENST00000542685 LYZL1Q6UWQ5 148 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 FAM216BQ8N7L0 139 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 SAP25Q8TEE9 199 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 DCANP1Q8TF63 244 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 TOMM6Q96B49 74 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 CXXC4Q9H2H0 198 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 C16orf95Q9H693 158 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 LINC00574Q9H8X3 128 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 RPUSD1Q9UJJ7 312 aaKnown RBP4.31□□□□□ -1.72
XRCC4-206ENST00000542685 UNC13CQ8NB66 2214 aa4.31□□□□□ -1.72
XRCC4-206ENST00000542685 SPAG17Q6Q759 2223 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 A0A0U1RQV1 116 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 NDUFA3O95167 84 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 CGB3P0DN86 165 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 CGB7P0DN87 165 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 PDE6HQ13956 83 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 PVRIGQ6DKI7 326 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 LINC00305Q7Z4B0 112 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 MDS2Q8NDY4 140 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 RNF185Q96GF1 192 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 OVOL2Q9BRP0 275 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 TIMM21Q9BVV7 248 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 ICOSQ9Y6W8 199 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 DSCAML1Q8TD84 2053 aa4.3□□□□□ -1.72
XRCC4-206ENST00000542685 TRAV26-2A0A0B4J265 109 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 TRBV10-3A0A0K0K1G6 114 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 A0A1B0GVY2 172 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 SRRM5B3KS81 715 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 IGKV3-15P01624 115 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 IGLV1-44P01699 117 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 PATE2Q6UY27 113 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 PRNTQ86SH4 94 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 RNF182Q8N6D2 247 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 MAPK1IP1LQ8NDC0 245 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 USF3Q68DE3 2245 aa4.29□□□□□ -1.72
XRCC4-206ENST00000542685 TRAV3A0A0B4J244 114 aa4.28□□□□□ -1.72
XRCC4-206ENST00000542685 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
XRCC4-206ENST00000542685 M0R381 172 aa4.28□□□□□ -1.72
XRCC4-206ENST00000542685 ZNF22P17026 224 aaPredicted RBP4.28□□□□□ -1.72
XRCC4-206ENST00000542685 LGALS3P17931 250 aaKnown RBP4.28□□□□□ -1.72
XRCC4-206ENST00000542685 ERCC8Q13216 396 aa4.28□□□□□ -1.72
XRCC4-206ENST00000542685 C10orf105Q8TEF2 133 aa4.28□□□□□ -1.72
XRCC4-206ENST00000542685 SMCR5Q8TEV8 140 aa4.28□□□□□ -1.72
XRCC4-206ENST00000542685 TMEM141Q96I45 108 aa4.28□□□□□ -1.72
XRCC4-206ENST00000542685 SCGB3A1Q96QR1 104 aa4.28□□□□□ -1.72
XRCC4-206ENST00000542685 SMIM2Q9BVW6 85 aa4.28□□□□□ -1.72
XRCC4-206ENST00000542685 TRBV19A0A075B6N1 114 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 IGHV4-4A0A075B6R2 117 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 TRAV41A0A0B4J266 112 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 A0A0J9YXY3 114 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 RBMY1BA6NDE4 496 aaKnown RBP4.27□□□□□ -1.73
XRCC4-206ENST00000542685 RBMY1EA6NEQ0 496 aaKnown RBP4.27□□□□□ -1.73
XRCC4-206ENST00000542685 LEPROTO15243 131 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 TSHBP01222 138 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 RBMY1DP0C7P1 496 aaKnown RBP4.27□□□□□ -1.73
XRCC4-206ENST00000542685 RBMY1A1P0DJD3 496 aaKnown RBP4.27□□□□□ -1.73
XRCC4-206ENST00000542685 RBMY1CP0DJD4 496 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 RBMY1FQ15415 496 aaKnown RBP4.27□□□□□ -1.73
XRCC4-206ENST00000542685 SFTA2Q6UW10 78 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 LINC01561Q8N1V8 128 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 KLF14Q8TD94 323 aaPredicted RBP4.27□□□□□ -1.73
XRCC4-206ENST00000542685 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 SLC50A1Q9BRV3 221 aa4.27□□□□□ -1.73
XRCC4-206ENST00000542685 ASCC3Q8N3C0 2202 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms