RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 SPATA45Q537H7 98 aa12.62□□□□□ -0.39
TMEM50B-210ENST00000542230 NEGR1Q7Z3B1 354 aa12.62□□□□□ -0.39
TMEM50B-210ENST00000542230 C14orf144Q96I85 54 aa12.62□□□□□ -0.39
TMEM50B-210ENST00000542230 MAP1LC3CQ9BXW4 147 aa12.62□□□□□ -0.39
TMEM50B-210ENST00000542230 HBDP02042 147 aa12.62□□□□□ -0.39
TMEM50B-210ENST00000542230 HSPB8Q9UJY1 196 aa12.62□□□□□ -0.39
TMEM50B-210ENST00000542230 OR11H12B2RN74 326 aa12.61□□□□□ -0.39
TMEM50B-210ENST00000542230 IGLV1-51P01701 117 aa12.61□□□□□ -0.39
TMEM50B-210ENST00000542230 Q8N8P6 123 aa12.61□□□□□ -0.39
TMEM50B-210ENST00000542230 MRAP2Q96G30 205 aa12.61□□□□□ -0.39
TMEM50B-210ENST00000542230 TP73-AS1Q9UF72 201 aa12.61□□□□□ -0.39
TMEM50B-210ENST00000542230 ZNF876PQ49A33 203 aa12.61□□□□□ -0.39
TMEM50B-210ENST00000542230 TMEM158Q8WZ71 300 aa12.61□□□□□ -0.39
TMEM50B-210ENST00000542230 LINC01546A6NGU7 62 aa12.6□□□□□ -0.39
TMEM50B-210ENST00000542230 NXT2Q9NPJ8 142 aaKnown RBP12.6□□□□□ -0.39
TMEM50B-210ENST00000542230 hDV102S1A0JD36 115 aa12.59□□□□□ -0.39
TMEM50B-210ENST00000542230 SUMO4Q6EEV6 95 aa12.59□□□□□ -0.39
TMEM50B-210ENST00000542230 ZNF705AQ6ZN79 300 aaPredicted RBP12.59□□□□□ -0.39
TMEM50B-210ENST00000542230 STHQ8IWL8 128 aa12.59□□□□□ -0.39
TMEM50B-210ENST00000542230 FBN1P35555 2871 aaKnown RBP12.59□□□□□ -0.39
TMEM50B-210ENST00000542230 F5H697 171 aa12.59□□□□□ -0.39
TMEM50B-210ENST00000542230 CRYGDP07320 174 aa12.59□□□□□ -0.39
TMEM50B-210ENST00000542230 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.59□□□□□ -0.39
TMEM50B-210ENST00000542230 LINC01587Q99440 93 aa12.59□□□□□ -0.39
TMEM50B-210ENST00000542230 C20orf144Q9BQM9 153 aa12.59□□□□□ -0.39
TMEM50B-210ENST00000542230 IGHV3OR16-12A0A075B7B8 117 aa12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 FOSL1P15407 271 aa12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 IGLL1P15814 213 aa12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 AZU1P20160 251 aa12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 DEFA6Q01524 100 aa12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 NDUFA11Q86Y39 141 aa12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 SMIM17P0DL12 118 aa12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 TRPT1Q86TN4 253 aaKnown RBP12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 POM121L12Q8N7R1 296 aa12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 SMIM2Q9BVW6 85 aa12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 C19orf73Q9NVV2 129 aa12.58□□□□□ -0.4
TMEM50B-210ENST00000542230 STAB1Q9NY15 2570 aa12.57□□□□□ -0.4
TMEM50B-210ENST00000542230 IGHV3-73A0A0B4J1V6 119 aa12.57□□□□□ -0.4
TMEM50B-210ENST00000542230 PRSS47A8MTI9 375 aa12.57□□□□□ -0.4
TMEM50B-210ENST00000542230 PF4P02776 101 aa12.57□□□□□ -0.4
TMEM50B-210ENST00000542230 FCER1GP30273 86 aa12.57□□□□□ -0.4
TMEM50B-210ENST00000542230 LINC01545Q5VT33 79 aa12.57□□□□□ -0.4
TMEM50B-210ENST00000542230 PET117Q6UWS5 81 aa12.57□□□□□ -0.4
TMEM50B-210ENST00000542230 LINC00482Q8N8I6 264 aa12.57□□□□□ -0.4
TMEM50B-210ENST00000542230 NDUFAF3Q9BU61 184 aa12.57□□□□□ -0.4
TMEM50B-210ENST00000542230 TRAV9-2A0A087WT02 112 aa12.56□□□□□ -0.4
TMEM50B-210ENST00000542230 CYSRT1A8MQ03 144 aa12.56□□□□□ -0.4
TMEM50B-210ENST00000542230 C1orf158Q8N1D5 194 aa12.56□□□□□ -0.4
TMEM50B-210ENST00000542230 DEFB125Q8N687 156 aa12.56□□□□□ -0.4
TMEM50B-210ENST00000542230 NACAE9PAV3 2078 aa12.56□□□□□ -0.4
TMEM50B-210ENST00000542230 TRGV11A0A075B6L2 103 aa12.56□□□□□ -0.4
TMEM50B-210ENST00000542230 GIG44P09565 113 aaPredicted RBP12.56□□□□□ -0.4
TMEM50B-210ENST00000542230 IFI27L1Q96BM0 104 aa12.56□□□□□ -0.4
TMEM50B-210ENST00000542230 RPL35AP18077 110 aaKnown RBP12.55□□□□□ -0.4
TMEM50B-210ENST00000542230 LAGE3Q14657 143 aa12.55□□□□□ -0.4
TMEM50B-210ENST00000542230 MORN3Q6PF18 240 aaPredicted RBP12.55□□□□□ -0.4
TMEM50B-210ENST00000542230 INSP01308 110 aa12.55□□□□□ -0.4
TMEM50B-210ENST00000542230 TCTAP57738 103 aa12.55□□□□□ -0.4
TMEM50B-210ENST00000542230 BEAN1Q3B7T3 259 aa12.55□□□□□ -0.4
TMEM50B-210ENST00000542230 C11orf72Q8NBR9 251 aa12.55□□□□□ -0.4
TMEM50B-210ENST00000542230 CSTL1Q9H114 145 aa12.55□□□□□ -0.4
TMEM50B-210ENST00000542230 Q9UF83 564 aa12.55□□□□□ -0.4
TMEM50B-210ENST00000542230 IGLC3P0DOY3 106 aa12.54□□□□□ -0.4
TMEM50B-210ENST00000542230 ZNF56Q15929 161 aa12.54□□□□□ -0.4
TMEM50B-210ENST00000542230 SYT8Q8NBV8 401 aa12.54□□□□□ -0.4
TMEM50B-210ENST00000542230 MIEN1Q9BRT3 115 aa12.54□□□□□ -0.4
TMEM50B-210ENST00000542230 DKK2Q9UBU2 259 aa12.54□□□□□ -0.4
TMEM50B-210ENST00000542230 PKD1L1Q8TDX9 2849 aa12.53□□□□□ -0.4
TMEM50B-210ENST00000542230 P0DMU3 169 aa12.52□□□□□ -0.4
TMEM50B-210ENST00000542230 FAM231AP0DMU4 169 aa12.52□□□□□ -0.4
TMEM50B-210ENST00000542230 FAM231CP0DMU5 169 aa12.52□□□□□ -0.4
TMEM50B-210ENST00000542230 C20orf78Q9BR46 151 aa12.52□□□□□ -0.4
TMEM50B-210ENST00000542230 TMEM208Q9BTX3 173 aa12.52□□□□□ -0.4
TMEM50B-210ENST00000542230 MRPL16Q9NX20 251 aaKnown RBP12.52□□□□□ -0.4
TMEM50B-210ENST00000542230 C20orf202A1L168 122 aa12.52□□□□□ -0.41
TMEM50B-210ENST00000542230 M0QY20 66 aa12.52□□□□□ -0.41
TMEM50B-210ENST00000542230 NUDT3O95989 172 aa12.52□□□□□ -0.41
TMEM50B-210ENST00000542230 EREGO14944 169 aa12.51□□□□□ -0.41
TMEM50B-210ENST00000542230 Q6ZSN1 163 aa12.51□□□□□ -0.41
TMEM50B-210ENST00000542230 CLUHP3Q96NS8 147 aa12.51□□□□□ -0.41
TMEM50B-210ENST00000542230 MAST4O15021 2626 aa12.51□□□□□ -0.41
TMEM50B-210ENST00000542230 POLR2KP53803 58 aaKnown RBP12.5□□□□□ -0.41
TMEM50B-210ENST00000542230 STPG4Q8N801 248 aa12.5□□□□□ -0.41
TMEM50B-210ENST00000542230 ST20Q9HBF5 79 aa12.5□□□□□ -0.41
TMEM50B-210ENST00000542230 SDHAF1A6NFY7 115 aa12.49□□□□□ -0.41
TMEM50B-210ENST00000542230 M0R2P5 195 aa12.49□□□□□ -0.41
TMEM50B-210ENST00000542230 GOLT1BQ9Y3E0 138 aa12.49□□□□□ -0.41
TMEM50B-210ENST00000542230 SNHG12Q9BXW3 62 aa12.49□□□□□ -0.41
TMEM50B-210ENST00000542230 PRSS1P07477 247 aa12.48□□□□□ -0.41
TMEM50B-210ENST00000542230 CTAG1AP78358 180 aa12.48□□□□□ -0.41
TMEM50B-210ENST00000542230 ZNF415Q09FC8 603 aa12.48□□□□□ -0.41
TMEM50B-210ENST00000542230 CITED1Q99966 193 aa12.48□□□□□ -0.41
TMEM50B-210ENST00000542230 ODF1Q14990 250 aa12.47□□□□□ -0.41
TMEM50B-210ENST00000542230 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
TMEM50B-210ENST00000542230 LGALS9CQ6DKI2 356 aa12.47□□□□□ -0.41
TMEM50B-210ENST00000542230 UFSP1Q6NVU6 142 aa12.47□□□□□ -0.41
TMEM50B-210ENST00000542230 Q6ZN92 141 aa12.47□□□□□ -0.41
TMEM50B-210ENST00000542230 ANKRD39Q53RE8 183 aa12.47□□□□□ -0.41
TMEM50B-210ENST00000542230 CFAP126Q5VTH2 177 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms