RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 G3V318 75 aa6.93□□□□□ -1.3
THBS3-211ENST00000541990 M0R1W7 72 aa6.93□□□□□ -1.3
THBS3-211ENST00000541990 NPFFO15130 113 aa6.93□□□□□ -1.3
THBS3-211ENST00000541990 RASL10AQ92737 203 aa6.93□□□□□ -1.3
THBS3-211ENST00000541990 ZNF815PA8K554 130 aa6.93□□□□□ -1.3
THBS3-211ENST00000541990 H7C1H1 209 aa6.93□□□□□ -1.3
THBS3-211ENST00000541990 SLC25A16P16260 332 aa6.93□□□□□ -1.3
THBS3-211ENST00000541990 PLNP26678 52 aa6.93□□□□□ -1.3
THBS3-211ENST00000541990 PSMG4Q5JS54 123 aa6.93□□□□□ -1.3
THBS3-211ENST00000541990 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.93□□□□□ -1.3
THBS3-211ENST00000541990 DLX4Q92988 240 aaPredicted RBP6.93□□□□□ -1.3
THBS3-211ENST00000541990 DEFB1P60022 68 aa6.92□□□□□ -1.3
THBS3-211ENST00000541990 ECSCRQ19T08 205 aa6.92□□□□□ -1.3
THBS3-211ENST00000541990 SCGB3A1Q96QR1 104 aa6.92□□□□□ -1.3
THBS3-211ENST00000541990 SMIM2Q9BVW6 85 aa6.92□□□□□ -1.3
THBS3-211ENST00000541990 SS18L2Q9UHA2 77 aa6.92□□□□□ -1.3
THBS3-211ENST00000541990 HIVEP2P31629 2446 aa6.92□□□□□ -1.3
THBS3-211ENST00000541990 TCL1BO95988 128 aa6.92□□□□□ -1.3
THBS3-211ENST00000541990 SPANXN1Q5VSR9 72 aa6.92□□□□□ -1.3
THBS3-211ENST00000541990 KRTAP1-3Q8IUG1 177 aa6.92□□□□□ -1.3
THBS3-211ENST00000541990 NEXN-AS1Q8NBZ9 246 aa6.92□□□□□ -1.3
THBS3-211ENST00000541990 SRSF8Q9BRL6 282 aaKnown RBP6.92□□□□□ -1.3
THBS3-211ENST00000541990 A0A096LNT2 108 aa6.91□□□□□ -1.3
THBS3-211ENST00000541990 TRAV8-2A0A0B4J237 113 aa6.91□□□□□ -1.3
THBS3-211ENST00000541990 BLCAPP62952 87 aa6.91□□□□□ -1.3
THBS3-211ENST00000541990 SRSF2Q01130 221 aaKnown RBP6.91□□□□□ -1.3
THBS3-211ENST00000541990 SCGB1D4Q6XE38 83 aa6.91□□□□□ -1.3
THBS3-211ENST00000541990 BAALCQ8WXS3 180 aa6.91□□□□□ -1.3
THBS3-211ENST00000541990 H3BUX3 64 aa6.91□□□□□ -1.3
THBS3-211ENST00000541990 M0R381 172 aa6.91□□□□□ -1.3
THBS3-211ENST00000541990 UBE2D1P51668 147 aa6.91□□□□□ -1.3
THBS3-211ENST00000541990 UBE2E1P51965 193 aa6.91□□□□□ -1.3
THBS3-211ENST00000541990 CD7P09564 240 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 NIPBLQ6KC79 2804 aaeCLIP6.9□□□□□ -1.3
THBS3-211ENST00000541990 TRAV12-1A0A0B4J245 112 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 IGHV1-69DA0A0B4J2H0 117 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 IGHV1-69P01742 117 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 TSPEAR-AS2P59090 65 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 UBE2D3P61077 147 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 UBE2D2P62837 147 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 SRSF9Q13242 221 aaKnown RBP eCLIP6.9□□□□□ -1.3
THBS3-211ENST00000541990 ANXA2RQ3ZCQ2 193 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 C10orf99Q6UWK7 81 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 TMEM190Q8WZ59 177 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 CR1P17927 2039 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 HIVEP1P15822 2718 aa6.9□□□□□ -1.3
THBS3-211ENST00000541990 NOTCH3Q9UM47 2321 aa6.9□□□□□ -1.31
THBS3-211ENST00000541990 B4DSR2 109 aa6.9□□□□□ -1.31
THBS3-211ENST00000541990 ZFAND3Q9H8U3 227 aa6.9□□□□□ -1.31
THBS3-211ENST00000541990 CLPSL1A2RUU4 121 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 BUB3O43684 328 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 IGHV4-59P01825 116 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 CRIP2P52943 208 aaPredicted RBP6.89□□□□□ -1.31
THBS3-211ENST00000541990 DEFB112Q30KQ8 113 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 C2orf66Q6UXQ4 117 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 ANKRD29Q8N6D5 301 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 C14orf178Q8N769 122 aaPredicted RBP6.89□□□□□ -1.31
THBS3-211ENST00000541990 Q8N9W7 124 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 NPBQ8NG41 125 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 ATP6V0E2Q8NHE4 81 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 TOMM6Q96B49 74 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 BEX4Q9NWD9 120 aaPredicted RBP6.89□□□□□ -1.31
THBS3-211ENST00000541990 SORL1Q92673 2214 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 LINC01619G3V211 115 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 DUSP14O95147 198 aaKnown RBP6.89□□□□□ -1.31
THBS3-211ENST00000541990 CRYGDP07320 174 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 IGHV4-31P0DP07 118 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 NDUFA11Q86Y39 141 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 RNF5Q99942 180 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 ERG28Q9UKR5 140 aa6.89□□□□□ -1.31
THBS3-211ENST00000541990 IGHV7-81A0A0B4J1V7 117 aa6.88□□□□□ -1.31
THBS3-211ENST00000541990 C11orf86A6NJI1 115 aa6.88□□□□□ -1.31
THBS3-211ENST00000541990 ATP6V0E1O15342 81 aa6.88□□□□□ -1.31
THBS3-211ENST00000541990 CLEC3BP05452 202 aa6.88□□□□□ -1.31
THBS3-211ENST00000541990 SUMO2P61956 95 aaKnown RBP6.88□□□□□ -1.31
THBS3-211ENST00000541990 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
THBS3-211ENST00000541990 EIF4EBP3O60516 100 aaPredicted RBP6.88□□□□□ -1.31
THBS3-211ENST00000541990 TSHBP01222 138 aa6.88□□□□□ -1.31
THBS3-211ENST00000541990 MGPP08493 103 aa6.88□□□□□ -1.31
THBS3-211ENST00000541990 C15orf32Q32M92 178 aa6.88□□□□□ -1.31
THBS3-211ENST00000541990 PPDPFLQ8WWR9 84 aa6.88□□□□□ -1.31
THBS3-211ENST00000541990 F8P00451 2351 aa6.88□□□□□ -1.31
THBS3-211ENST00000541990 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
THBS3-211ENST00000541990 CFC1P0CG37 223 aa6.87□□□□□ -1.31
THBS3-211ENST00000541990 IGLV4-69A0A075B6H9 119 aa6.87□□□□□ -1.31
THBS3-211ENST00000541990 A0A0J9YY99 117 aa6.87□□□□□ -1.31
THBS3-211ENST00000541990 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
THBS3-211ENST00000541990 CLEC19AQ6UXS0 136 aa6.87□□□□□ -1.31
THBS3-211ENST00000541990 TRPT1Q86TN4 253 aaKnown RBP6.87□□□□□ -1.31
THBS3-211ENST00000541990 LINC01356Q8N9X3 169 aa6.87□□□□□ -1.31
THBS3-211ENST00000541990 CCDC140Q96MF4 163 aa6.87□□□□□ -1.31
THBS3-211ENST00000541990 CRLF1O75462 422 aa6.86□□□□□ -1.31
THBS3-211ENST00000541990 ELANEP08246 267 aa6.86□□□□□ -1.31
THBS3-211ENST00000541990 NHLRC4P0CG21 123 aaPredicted RBP6.86□□□□□ -1.31
THBS3-211ENST00000541990 RPL39P62891 51 aaKnown RBP6.86□□□□□ -1.31
THBS3-211ENST00000541990 RAX2Q96IS3 184 aa6.86□□□□□ -1.31
THBS3-211ENST00000541990 ANAPC13Q9BS18 74 aa6.86□□□□□ -1.31
THBS3-211ENST00000541990 IGHV4-4A0A075B6R2 117 aa6.86□□□□□ -1.31
THBS3-211ENST00000541990 RBAKDNA6NC62 111 aa6.86□□□□□ -1.31
THBS3-211ENST00000541990 B5MCH6 92 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms