RNA–Protein interactions for RNA: ENST00000541260.5

CCDC189-204, Transcript of coiled-coil domain containing 189, human

TSL 5 BASIC

Gene CCDC189, Length 1,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC189-204	ENST00000541260	IGHV3-73	A0A0B4J1V6	119 aa		11.77	□□□□□ -0.52
CCDC189-204	ENST00000541260		F8W036	122 aa		11.77	□□□□□ -0.52
CCDC189-204	ENST00000541260	NUDT3	O95989	172 aa		11.77	□□□□□ -0.52
CCDC189-204	ENST00000541260	SEC11C	Q9BY50	192 aa		11.77	□□□□□ -0.52
CCDC189-204	ENST00000541260		A0A087WWL8	130 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	NTF3	P20783	257 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	SST	P61278	116 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	SLC25A29	Q8N8R3	303 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	LINC00476	Q8WZB0	136 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	AP1S3	Q96PC3	154 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260		A0A096LPF7	62 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	LCE6A	A0A183	80 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	HIGD1C	A8MV81	97 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	FAM74A4	Q5TZK3	123 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	MSRB1	Q9NZV6	116 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	ICOS	Q9Y6W8	199 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260	KIF25-AS1	Q9Y6Z4	181 aa		11.76	□□□□□ -0.53
CCDC189-204	ENST00000541260		P0DMU3	169 aa		11.75	□□□□□ -0.53
CCDC189-204	ENST00000541260	FAM231A	P0DMU4	169 aa		11.75	□□□□□ -0.53
CCDC189-204	ENST00000541260	FAM231C	P0DMU5	169 aa		11.75	□□□□□ -0.53
CCDC189-204	ENST00000541260	RHOH	Q15669	191 aa		11.75	□□□□□ -0.53
CCDC189-204	ENST00000541260	MRPL23	Q16540	153 aa	Known RBP	11.75	□□□□□ -0.53
CCDC189-204	ENST00000541260		Q6ZSN1	163 aa		11.75	□□□□□ -0.53
CCDC189-204	ENST00000541260	C14orf178	Q8N769	122 aa	Predicted RBP	11.75	□□□□□ -0.53
CCDC189-204	ENST00000541260	PGLYRP4	Q96LB8	373 aa		11.75	□□□□□ -0.53
CCDC189-204	ENST00000541260		K7EQD1	137 aa		11.74	□□□□□ -0.53
CCDC189-204	ENST00000541260	PPP1R2P9	O14990	202 aa		11.74	□□□□□ -0.53
CCDC189-204	ENST00000541260	TRGC1	P0CF51	173 aa		11.74	□□□□□ -0.53
CCDC189-204	ENST00000541260	C10orf91	Q5T1B1	145 aa		11.74	□□□□□ -0.53
CCDC189-204	ENST00000541260	PRADC1	Q9BSG0	188 aa		11.74	□□□□□ -0.53
CCDC189-204	ENST00000541260	SMIM27	A0A1W2PRY6	76 aa		11.73	□□□□□ -0.53
CCDC189-204	ENST00000541260	SMIM17	P0DL12	118 aa		11.73	□□□□□ -0.53
CCDC189-204	ENST00000541260	GYPE	P15421	78 aa		11.73	□□□□□ -0.53
CCDC189-204	ENST00000541260	LINC00315	P59091	139 aa		11.73	□□□□□ -0.53
CCDC189-204	ENST00000541260	RAB4B	P61018	213 aa		11.73	□□□□□ -0.53
CCDC189-204	ENST00000541260	TWIST1	Q15672	202 aa		11.73	□□□□□ -0.53
CCDC189-204	ENST00000541260	RNF212	Q495C1	297 aa		11.73	□□□□□ -0.53
CCDC189-204	ENST00000541260	ANAPC16	Q96DE5	110 aa		11.73	□□□□□ -0.53
CCDC189-204	ENST00000541260	NAT8B	Q9UHF3	227 aa		11.73	□□□□□ -0.53
CCDC189-204	ENST00000541260		A0A1B0GUT8	65 aa		11.72	□□□□□ -0.53
CCDC189-204	ENST00000541260	MT-ND4L	P03901	98 aa		11.72	□□□□□ -0.53
CCDC189-204	ENST00000541260	NUP35	Q8NFH5	326 aa		11.72	□□□□□ -0.53
CCDC189-204	ENST00000541260	BORCS7	Q96B45	105 aa		11.72	□□□□□ -0.53
CCDC189-204	ENST00000541260	LY6G6C	O95867	125 aa		11.71	□□□□□ -0.53
CCDC189-204	ENST00000541260	EVI2A	P22794	236 aa		11.71	□□□□□ -0.53
CCDC189-204	ENST00000541260	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.71	□□□□□ -0.53
CCDC189-204	ENST00000541260	SRI	P30626	198 aa		11.7	□□□□□ -0.54
CCDC189-204	ENST00000541260	CCL18	P55774	89 aa		11.7	□□□□□ -0.54
CCDC189-204	ENST00000541260	NEGR1	Q7Z3B1	354 aa		11.7	□□□□□ -0.54
CCDC189-204	ENST00000541260	SH2D6	Q7Z4S9	175 aa		11.7	□□□□□ -0.54
CCDC189-204	ENST00000541260	DPH3P1	Q9H4G8	78 aa		11.7	□□□□□ -0.54
CCDC189-204	ENST00000541260	TRBV10-1	A0A0K0K1A3	114 aa		11.7	□□□□□ -0.54
CCDC189-204	ENST00000541260	LOC100131303	A0A0U1RQF7	123 aa		11.7	□□□□□ -0.54
CCDC189-204	ENST00000541260	ZNF56	Q15929	161 aa		11.7	□□□□□ -0.54
CCDC189-204	ENST00000541260	LYST	Q99698	3801 aa		11.69	□□□□□ -0.54
CCDC189-204	ENST00000541260	FAM3B	P58499	235 aa	Predicted RBP	11.69	□□□□□ -0.54
CCDC189-204	ENST00000541260	ESRG	Q1W209	222 aa		11.69	□□□□□ -0.54
CCDC189-204	ENST00000541260	SMIM15	Q7Z3B0	74 aa		11.69	□□□□□ -0.54
CCDC189-204	ENST00000541260	ALMS1	Q8TCU4	4167 aa		11.69	□□□□□ -0.54
CCDC189-204	ENST00000541260		F5H697	171 aa		11.68	□□□□□ -0.54
CCDC189-204	ENST00000541260	LINC00694	P0DN24	101 aa		11.68	□□□□□ -0.54
CCDC189-204	ENST00000541260	RIG	Q13278	110 aa		11.68	□□□□□ -0.54
CCDC189-204	ENST00000541260	UBE2DNL	Q8IWF7	75 aa		11.67	□□□□□ -0.54
CCDC189-204	ENST00000541260	CTDSP1	Q9GZU7	261 aa		11.67	□□□□□ -0.54
CCDC189-204	ENST00000541260		Q9UF83	564 aa		11.67	□□□□□ -0.54
CCDC189-204	ENST00000541260	LINC00588	Q9Y4M8	146 aa		11.67	□□□□□ -0.54
CCDC189-204	ENST00000541260	LYPD5	Q6UWN5	251 aa		11.66	□□□□□ -0.54
CCDC189-204	ENST00000541260	TMEM191A	Q9H0A3	160 aa		11.66	□□□□□ -0.54
CCDC189-204	ENST00000541260	DNAH1	Q9P2D7	4330 aa		11.66	□□□□□ -0.54
CCDC189-204	ENST00000541260	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.66	□□□□□ -0.54
CCDC189-204	ENST00000541260		A0A1B0GW15	77 aa		11.65	□□□□□ -0.54
CCDC189-204	ENST00000541260		H7C1H1	209 aa		11.65	□□□□□ -0.54
CCDC189-204	ENST00000541260		M0QY20	66 aa		11.65	□□□□□ -0.54
CCDC189-204	ENST00000541260	MGP	P08493	103 aa		11.65	□□□□□ -0.54
CCDC189-204	ENST00000541260	TIRAP	P58753	221 aa		11.65	□□□□□ -0.54
CCDC189-204	ENST00000541260	UPK3B	Q9BT76	320 aa		11.65	□□□□□ -0.54
CCDC189-204	ENST00000541260	MRPS16	Q9Y3D3	137 aa	Known RBP	11.65	□□□□□ -0.54
CCDC189-204	ENST00000541260	GAGE12J	A6NER3	117 aa		11.65	□□□□□ -0.55
CCDC189-204	ENST00000541260	RPL36A	P83881	106 aa	Known RBP	11.65	□□□□□ -0.55
CCDC189-204	ENST00000541260	GAGE1	Q13065	139 aa		11.65	□□□□□ -0.55
CCDC189-204	ENST00000541260	GAGE4	Q13068	117 aa		11.65	□□□□□ -0.55
CCDC189-204	ENST00000541260	GAGE5	Q13069	117 aa		11.65	□□□□□ -0.55
CCDC189-204	ENST00000541260	GAGE13	Q4V321	117 aa		11.65	□□□□□ -0.55
CCDC189-204	ENST00000541260	ATP6V0E2	Q8NHE4	81 aa		11.65	□□□□□ -0.55
CCDC189-204	ENST00000541260	RPL36AL	Q969Q0	106 aa	Known RBP	11.65	□□□□□ -0.55
CCDC189-204	ENST00000541260	IMMP2L	Q96T52	175 aa		11.65	□□□□□ -0.55
CCDC189-204	ENST00000541260	VPS13D	Q5THJ4	4388 aa		11.64	□□□□□ -0.55
CCDC189-204	ENST00000541260	TRBV7-3	A0A075B6L6	115 aa		11.64	□□□□□ -0.55
CCDC189-204	ENST00000541260	SUMO4	Q6EEV6	95 aa		11.64	□□□□□ -0.55
CCDC189-204	ENST00000541260	NEXN-AS1	Q8NBZ9	246 aa		11.64	□□□□□ -0.55
CCDC189-204	ENST00000541260	FRZB	Q92765	325 aa		11.64	□□□□□ -0.55
CCDC189-204	ENST00000541260	TMEM242	Q9NWH2	141 aa		11.64	□□□□□ -0.55
CCDC189-204	ENST00000541260	SACS	Q9NZJ4	4579 aa		11.63	□□□□□ -0.55
CCDC189-204	ENST00000541260	RHEB	Q15382	184 aa		11.63	□□□□□ -0.55
CCDC189-204	ENST00000541260	ATP5L2	Q7Z4Y8	100 aa		11.63	□□□□□ -0.55
CCDC189-204	ENST00000541260	CLRN3	Q8NCR9	226 aa		11.63	□□□□□ -0.55
CCDC189-204	ENST00000541260	ZNRF2	Q8NHG8	242 aa		11.63	□□□□□ -0.55
CCDC189-204	ENST00000541260		A0A087WWC5	75 aa		11.62	□□□□□ -0.55
CCDC189-204	ENST00000541260		A0A1B0GXF2	115 aa		11.62	□□□□□ -0.55
CCDC189-204	ENST00000541260	UBE2D3	P61077	147 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms